TCONS_00020567-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020567-protein
Unique NameTCONS_00020567-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020567-protein ID=TCONS_00020567-protein|Name=TCONS_00020567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
RKMAACNPNEFGFDVIFAWEDEKDAQNQNAQIGGAINRDDITCAICLLVL
REPVQAVDCGHRFCTKCIGEFHLINPGKCPKDWQDIQVFPDVGKKREILS
LKIRCKNFTDGCKWQNELREEEASKMFPNFN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011543XLOC_011543Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020567TCONS_00020567Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 43..82
e-value: 2.9E-4
score: 30.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 43..82
score: 10.616
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 42..80
e-value: 8.31536E-8
score: 43.9736
NoneNo IPR availablePFAMPF13923zf-C3HC4_2coord: 43..80
e-value: 8.0E-9
score: 35.1
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 37..89
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 17..127
e-value: 2.2E-12
score: 46.5
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 59..68

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00020567-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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