TCONS_00020868-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020868-protein
Unique NameTCONS_00020868-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length165

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020868-protein ID=TCONS_00020868-protein|Name=TCONS_00020868-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MVDEEATETLAQRHKREQKELQGKIQALKHGIPKGDKKRKKQVTIEIAQL
QAELDQKQQEKIDDEKSTTVNGEDNTSFNEAVEDKLTIQENGEADLTEGR
TQQSGKKTSKAQKRREKKEQEERERQKRLVEGEKESANHVRNLEAAQFDK
ILKENLLKIREVSSM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011703XLOC_011703Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020868TCONS_00020868Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..31
NoneNo IPR availableCOILSCoilCoilcoord: 40..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..143

Blast
[Close]
BLAST of TCONS_00020868-protein vs. Swiss-Prot (Human)
Match: OTU6B (OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.919e-16
Identity = 58/152 (38.16%), Postives = 95/152 (62.50%), Query Frame = 0 
Query:   13 RHKREQKELQGKIQALKHGIPKGDKKRKKQVTIEIAQLQAELDQKQQEKIDDEKSTTVNGEDNTSFNEAVEDKLTIQENGEADLTEGRTQQSGKKTSKAQKRREKKEQEERERQKRLVEGEKESANHVRNLEAAQFDKILKENLLKIREVSS 164
            RH++E+KELQ KIQ +K+ +PK DKKR+KQ+T ++A+L+ E++QK +E+++  K TT   ++N   + AV     + EN               + SKAQKRREKK   E+ER++R+ E E E+    R++E+ +  +IL    L+I+++ S
Sbjct:   18 RHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTT---KENKIDSVAVNISNLVLEN------------QPPRISKAQKRREKKAALEKEREERIAEAEIENLTGARHMESEKLAQILAARQLEIKQIPS 154
The following BLAST results are available for this feature:
BLAST of TCONS_00020868-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OTU6B3.919e-1638.16OTU domain-containing protein 6B OS=Homo sapiens G... [more]
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