TCONS_00021246-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021246-protein
Unique NameTCONS_00021246-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length472

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021246-protein ID=TCONS_00021246-protein|Name=TCONS_00021246-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
MARSDLYAKNWSENVTYTSDIVLFPNNTPELQRIIKDVRYAKLKVIGTRH
CFNTIADTGHNTDLETGETAHICLENMTLTYFDKVVIGGEEDLGLQPVVT
FGAGMTYSKLIDIVDAEGFAIQNLPSLPHINVVGSMITGTHGSGHKYQIL
TTQVVAFDMVFANGKLESLSKPTTPDFTNYLINFGGLGVITSMTIKLVPT
FMVSKSIYKNLKWDILFDKNYFDNIMHHQDFLSCFCTWKTREMSSVWVGK
KYYEGDPLPVKEIEYFGAKHITGNRIHPVPGRDSSVNVTTGVGKWRDKIY
HFLPDKPPSSAGNEIQTEFFVPYEHFINAMEALYLIKDKFQHLVQVSEFR
MVLEDNLPMSPAKHQTCIGIHFTWWREHEKILSVLPLIESTLSKFNVKPH
FGKLFQMSGPKFENLYGSDLDKLRALCYKHDPTGKFRNNFMEKYIFTSRY
GKMTTEEEAVLCKKHFPIISKL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011893XLOC_011893Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021246TCONS_00021246Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016169CO_DH_flavot_FAD-bd_sub2
IPR006094Oxid_FAD_bind_N
IPR007173ALO
IPR016167FAD-bd_2_sub1
IPR016166FAD-bd_2
Vocabulary: Molecular Function
TermDefinition
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
GO:0003885D-arabinono-1,4-lactone oxidase activity
GO:0003824catalytic activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016020 membrane
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003885 D-arabinono-1,4-lactone oxidase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016169CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2GENE3D3.30.465.10coord: 96..216
e-value: 6.1E-17
score: 60.9
IPR006094FAD linked oxidase, N-terminalPFAMPF01565FAD_binding_4coord: 96..169
e-value: 1.2E-5
score: 25.0
IPR007173D-arabinono-1,4-lactone oxidasePFAMPF04030ALOcoord: 316..443
e-value: 1.6E-13
score: 51.0
IPR016167FAD-binding, type 2, subdomain 1GENE3D3.30.43.10coord: 1..78
e-value: 6.3E-6
score: 25.4
IPR016166FAD-binding, type 2PROSITEPS51387FAD_PCMHcoord: 15..200
score: 12.18
IPR016166FAD-binding, type 2SUPERFAMILY56176FAD-binding/transporter-associated domain-likecoord: 7..199

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021246-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top