TCONS_00021393-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021393-protein
Unique NameTCONS_00021393-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length714

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021393-protein ID=TCONS_00021393-protein|Name=TCONS_00021393-protein|organism=Clytia hemisphaerica|type=polypeptide|length=714bp
MRVKINYVGVGLLASLLFLVFHYYKGSGSRPKTTHNKILTLSTENDRTVL
RTVKKTTTLATTNDDQEESNRIKFTQLQYGLDGLEHSQEAQSRHFKEELQ
GIKESQSQILEKQESYNEIQKEFVDRQKILEETLKNLKKHFDDEHDERMR
EREYGQKKLHRLIRAEKEIKKQRQQQVKEQKKNDKEQKDANESEEDEAKR
MIEEQLKRDAEEADYQAEEERKEMEAERQQQREYEQEHQSHQQIQTEGAP
SGLVVNNREDLNQMNERGKMTTTRNSELPSGNRIQKKKPSSVGRVYQSNY
PVTFDEVAMLHIHNATYSKNTHKEVREFYDRERVSKKKYGERVLDVKRDR
DVLMALFPGPNEKRDRVTDQLRVRLNVKDTKIIYLKSSVNTQQKFDNDKC
KVNKCTFTNDINLLPHVDAIYSELDTIPQPFDIQNKNQIKIRFQLESSDN
YPTLTSDTAIFNWTATYRVDSVLNAPYERFVTKLSVTDLPTKPLENYAKG
KKKMAAWFVSNCHAGSGRQDYIKDLQKYITVDVYGLCGRKCSKKDKKCFE
QLNTDYKFYMAFENSHCKDYLTEKPYWNALFYKVVPVVFGAHRDDYKRQL
PPNSYILAEDFESPKHLADYLIYLDHNDDLYNQYFLWKGTGKFINTKFLC
RLCTMVHLAPHFPMWYSEVNDWWGPDKTCVQPERHKHLMYSSWGNKTRPS
EFSEYVHYGYKRID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011978XLOC_011978Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021393TCONS_00021393Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031481Glyco_tran_10_N
IPR001503Glyco_trans_10
Vocabulary: Molecular Function
TermDefinition
GO:0008417fucosyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006486protein glycosylation
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006486 protein glycosylation
cellular_component GO:0016020 membrane
molecular_function GO:0008417 fucosyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..244
NoneNo IPR availableCOILSCoilCoilcoord: 102..122
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..292
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 387..673
IPR031481Fucosyltransferase, N-terminalPFAMPF17039Glyco_tran_10_Ncoord: 381..477
e-value: 4.9E-11
score: 43.0
IPR001503Glycosyl transferase family 10PFAMPF00852Glyco_transf_10coord: 501..673
e-value: 2.1E-56
score: 190.3

Blast
[Close]
BLAST of TCONS_00021393-protein vs. Swiss-Prot (Human)
Match: FUT5 (Alpha-(1,3)-fucosyltransferase 5 OS=Homo sapiens GN=FUT5 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 6.810e-34
Identity = 94/260 (36.15%), Postives = 128/260 (49.23%), Query Frame = 0 
Query:  405 CTFTNDINLLPHVDAI--------YSELDTIPQPFDIQNKNQIKIRFQLESSDNYPTLTSDTAIFNWTATYRVDSVLNAPYERFVTKLSVTDLPTKPLENYAKGKKKMAAWFVSNCHAGSGRQDYIKDLQKYITVDVYGLCGRKCSKKDKKCFEQLNTDYKFYMAFENSHCKDYLTEKPYWNALFYKVVPVVFGAHRDDYKRQLPPNSYILAEDFESPKHLADYLIYLDHNDDLYNQYFLWKGTGK---FINTKFLCRLC 653
            C  T D ++ P  DA+        Y+    +P P   + + Q  I F +ES  N   L +    FN T +YR DS +  PY         +  P  P  N +  K ++ AW VSN    S R  Y + LQ ++ VDVYG   R      K    +  + YKFY+AFENS   DY+TEK + NAL    VPVV G  R +Y+R LPP+++I  +DF+SPK LA YL  LD +   Y  YF W+ T +   F      C+ C
Sbjct:  104 CNITADSSVYPQADAVIVHHWDIMYNPSANLPPP--TRPQGQRWIWFSMESPSNCRHLEALDGYFNLTMSYRSDSDIFTPYGWLEPW---SGQPAHPPLNLS-AKTELVAWAVSNWKPDSARVRYYQSLQAHLKVDVYG---RSHKPLPKGTMMETLSRYKFYLAFENSLHPDYITEKLWRNALEAWAVPVVLGPSRSNYERFLPPDAFIHVDDFQSPKDLARYLQELDKDHARYLSYFRWRETLRPRSFSWALAFCKAC 354
The following BLAST results are available for this feature:
BLAST of TCONS_00021393-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FUT56.810e-3436.15Alpha-(1,3)-fucosyltransferase 5 OS=Homo sapiens G... [more]
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