TCONS_00021398-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021398-protein
Unique NameTCONS_00021398-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length222

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021398-protein ID=TCONS_00021398-protein|Name=TCONS_00021398-protein|organism=Clytia hemisphaerica|type=polypeptide|length=222bp
XNQIPRTNKYFIDYLGDPLCNSIRFRQITPTAVLKLIDDLDAQKASGPSS
IPTSFLKMISPTASTVLSHIFNVSIKEGIYPDCLKQANIKPLHKKDSKLD
VGNYRPISLLSNINKIFEKLLHFRLVKFFENNNIFSEKQFGFRKGHSTNH
AVIALTEVVRSALDNGNFAAGVFIDLKKAFDTVEHTILLHKLVHYGIRGP
ALALLRSYLSNRTHCVDIRNTH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011983XLOC_011983Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021398TCONS_00021398Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 93..220
e-value: 3.9E-25
score: 88.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 73..222
score: 10.68
NoneNo IPR availableGENE3D3.30.70.270coord: 112..215
e-value: 9.1E-4
score: 18.4
NoneNo IPR availableCDDcd01650RT_nLTR_likecoord: 87..198
e-value: 1.09678E-33
score: 120.474
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 35..214

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00021398-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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