TCONS_00021907-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021907-protein
Unique NameTCONS_00021907-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021907-protein ID=TCONS_00021907-protein|Name=TCONS_00021907-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
DQTNTLKRNHNESGNESSIEHNTNTKNRNNDLSQTNTHIPMKDPLSFIPT
CCPNRQENFSPKRCSLSQPCPENINYRQNVSSIVQQPIRRVYISPSDDCF
TITPESLYNIGKKDVVIIKRSLPEGSDSDCKPGNVYENEHEKAKNQNILW
RDFPYTRDQIGRMPVSKFNDLILQLDEMRVHVARDIRRKFKNKIAARNCR
KRKIQQIDHLDTGLESLESNLHKLQTENKDLKKDIADLTNKLSWFDQQIF
DQLKDRDAIPSFSEKTHSLWYANDKVFLVSQPPKKTVTITVQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012294XLOC_012294Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021907TCONS_00021907Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP
IPR004826bZIP_Maf
IPR008917TF_DNA-bd
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 207..241
NoneNo IPR availableGENE3D1.10.880.10coord: 3..199
e-value: 1.7E-14
score: 53.7
NoneNo IPR availableGENE3D1.20.5.170coord: 200..245
e-value: 6.4E-12
score: 45.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 191..242
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 180..244
e-value: 4.3E-10
score: 49.5
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 187..202
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 182..245
score: 9.806
IPR004826Basic leucine zipper domain, Maf-typePFAMPF03131bZIP_Mafcoord: 156..240
e-value: 1.3E-11
score: 44.7
IPR008917Transcription factor, Skn-1-like, DNA-binding domainSUPERFAMILY47454A DNA-binding domain in eukaryotic transcription factorscoord: 151..208

Blast
[Close]
BLAST of TCONS_00021907-protein vs. Swiss-Prot (Human)
Match: NF2L1 (Nuclear factor erythroid 2-related factor 1 OS=Homo sapiens GN=NFE2L1 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.980e-19
Identity = 46/129 (35.66%), Postives = 79/129 (61.24%), Query Frame = 0 
Query:  153 FPYTRDQIGRMPVSKFNDLI--LQLDEMRVHVARDIRRKFKNKIAARNCRKRKIQQIDHLDTGLESLESNLHKLQTENKDLKKDIADLTNKLSWFDQQIFDQLKDRDAIPSFSEKTHSLWYANDKVFLV 279
             P+T D+I  +PV +FN+L+   QL E ++ + RDIRR+ KNK+AA+NCRKRK+  I +L+  +E L+ +  +L  E  +  + +  +  K+    Q++F +L+D +  P +S   ++L YA D   L+
Sbjct:  623 IPFTNDKIINLPVEEFNELLSKYQLSEAQLSLIRDIRRRGKNKMAAQNCRKRKLDTILNLERDVEDLQRDKARLLREKVEFLRSLRQMKQKVQSLYQEVFGRLRDENGRP-YSPSQYALQYAGDGSVLL 750
The following BLAST results are available for this feature:
BLAST of TCONS_00021907-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NF2L13.980e-1935.66Nuclear factor erythroid 2-related factor 1 OS=Hom... [more]
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