TCONS_00021916-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00021916-protein
Unique NameTCONS_00021916-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length426

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00021916-protein ID=TCONS_00021916-protein|Name=TCONS_00021916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=426bp
MVAAVRKSAIVPPPQTGQGEGMTGPYFQHNIYNMSSEPHFRSESPIPRSP
RFGSLRRRKRIDREYFDDTSEGSDGRTSSDEYESSSNQTSKKMDDNNNTN
QKNRKNSHFAFSNVKKKITSTFQRRHSVSMHPPSATVQGKQLPIRRSSTT
GNQSPRLLRQSSFDESHTAVHKRKTSLRRQVTMAAVRLHEQSQVSGSNPM
LDRILQKSQFQLESSSSTPDIKSHLSLKKTHLKTFKIHILGSKSVGKTAL
TVRFLTGRYIHEYKSAAEETYTRVMKYEDEEVNVKILINDIESMENDIEL
GQNSGIMILYSIVDRTSYDYAKFVLNYLSENNITGYYPVMLMGTKRDLSR
MRQVDRKESFKVATQYNCTPFDVSSASNRRVTESFHAMFRQIEIRNLLNQ
NEGIDAPTIVNPPIVARSGKLRYGTA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_012299XLOC_012299Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00021916TCONS_00021916Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..297
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 335..348
score: 39.26
coord: 235..256
score: 40.32
coord: 370..392
score: 21.78
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 232..395
e-value: 8.5E-12
score: 49.2
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 237..395
e-value: 0.0096
score: -81.5
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 235..395
e-value: 1.3E-7
score: -14.5
NoneNo IPR availableGENE3D3.30.70.1390coord: 233..311
e-value: 1.1E-7
score: 31.2
NoneNo IPR availableGENE3D3.40.50.300coord: 312..396
e-value: 1.0E-10
score: 41.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..178
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 236..393
e-value: 1.2E-21
score: 76.9
IPR020849Small GTPase superfamily, Ras typePROSITEPS51421RAScoord: 230..426
score: 12.864
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 233..392

Blast
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BLAST of TCONS_00021916-protein vs. Swiss-Prot (Human)
Match: RERG (Ras-related and estrogen-regulated growth inhibitor OS=Homo sapiens GN=RERG PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.576e-21
Identity = 56/168 (33.33%), Postives = 89/168 (52.98%), Query Frame = 0 
Query:  236 KIHILGSKSVGKTALTVRFLTGRYIHEYKSAAEETYTRVMKYEDEEVNVKILINDIESMENDIE----LGQNSGIMILYSIVDRTSYDYAKFVLNYLSENNITGYYPVMLMGTKRDLSRMRQVDRKESFKVATQYNCTPFDVSSASNR-RVTESFHAMFRQIEIRNLL 398
            K+ I G   VGK+AL VRFLT R+I EY    E TY      +DE V+++IL  D    E+ I+    +    G +++Y I DR S++    + N L E        ++L+G K DL   RQV  +E  K+AT+  C  ++ S+ +    +TE F+ + R++  R ++
Sbjct:    8 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDEVVSMEIL--DTAGQEDTIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILDEIKKPKNVTLILVGNKADLDHSRQVSTEEGEKLATELACAFYECSACTGEGNITEIFYELCREVRRRRMV 173
The following BLAST results are available for this feature:
BLAST of TCONS_00021916-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RERG2.576e-2133.33Ras-related and estrogen-regulated growth inhibito... [more]
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