TCONS_00022343-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00022343-protein
Unique Name	TCONS_00022343-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	867

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00022343-protein ID=TCONS_00022343-protein|Name=TCONS_00022343-protein|organism=Clytia hemisphaerica|type=polypeptide|length=867bp
TSNFLKLCVLKAIQSSNKHLDKIFNVDEFCRRFFAVIHSNDPIARSITLR
VFGNISCIISERKNIHHCIRTSLDSHDVEEVEAAIFATKCFAEQSRSFAS
SIWQPVTEMIKGLVTPIDIKLKLIPVLKFMYHDTNVAKEIFAICEELLSS
YPSHHFVVSALNATTQLAVPTLLHIPRQIDMLLRYTREEPRKSINHVAIN
NLLLLAKKTPHLWSEQQVQSLLEMGTDCLHLNIKIKTMNVLSLLASSCNC
HQMFTKDVLDGLEYLTNDMSLEVSSLALKIKIQALLSSTEELAEEHRTCV
QSDIQTMLAMCCAEESFNALKNCLCAMQLFVKKYHGQSEELIAFICECLN
NMNGECLLQVLHSLVTMATQIDGLCTDHVAGLMSLLKERLQGVEDKQQQD
IIVGLLTLIFQSSYTFDSTAKNDVENEILQQLASSLTDHHMYWVLYRITR
QASKLGLPNIAASLLKLLASKVASESLYFWLNSLQHFHEGESLLSQNADS
SNGKLLEKLSASHDHYQEGLTNLKAAITTDHPLYFQFKYARLRADTLRAY
SQLLACCSVFKLNPPPSNAFIQASKTGQDPYQFSRVAVQFQNCAAKFSGV
AYGYQNLHKVSFNADQTTLNTIRCLQESCQLMVEAIESLFTPINHQQQQR
GSSQGSERSEEEERKTGDNLFCRNVTKTNLHILQQLQNSKTEHLSIKNIN
VLTTIIQSQLNIAFSYPQFFYKRQQNTKIQLSVSPCNHMMEDPFLIHLNH
QMTIKVEGVILNQPQSVYFRRASEVRIQLKMRPSDNVKNPSNEHKPVQVE
DFVLKESTPPHYDFFSAQFLVPFKYVGRHTIKISTGLTDEHGVDWDAGPS
YTVFVDVQEPGAHARKR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_012528	XLOC_012528	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00022343	TCONS_00022343	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 2..708 e-value: 5.4E-16 score: 56.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 644..668
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 7..488 coord: 540..564

Blast

[Close]

BLAST of TCONS_00022343-protein vs. Swiss-Prot (Human)
Match: INT7 (Integrator complex subunit 7 OS=Homo sapiens GN=INTS7 PE=1 SV=1)

HSP 1 Score: 481.485 bits (1238), Expect = 5.761e-156
Identity = 299/883 (33.86%), Postives = 496/883 (56.17%), Query Frame = 0

Query:    2 SNFLKLCVLKAIQSSNKHLDKIFNVDEFCRRFFAVIHSNDPIARSITLRVFGNISCIISERKNIHHCIRTSLDSHDVEEVEAAIFATKCFAEQSRSFASSIWQPVTEMIKGLVTPIDIKLKLIPVLKFMYHDTNVAKEIFAICEELLSSYPSHHFVVSALNATTQLAVPTLLHIPRQIDMLLRYTREEPRKSINHVAINNLLLLAKKTPHLWSEQQVQSLLEMGTDCLHLNIKIKTMNVLSLLASSCNCHQMFTKDVLDGLEYLTNDMSLEVSSLALKI-----------KIQALLSSTEELAEEHRTCVQSD----IQTMLAMCCAEESFNALKNCLCAMQLFVKKYHGQ---SEELIAFICECLNNMNGECLLQVLHSLVTMATQIDGLCTDHVAGLMSLLKERLQGVEDKQQQDIIVGLLTLIFQSSYTFDSTAKNDVENEILQQLASSLTDHHMYWVLYRITRQASKLGLPNIAASLLKLLASKVASESLYFWLNSLQHFHEGESLLSQNADSSNGKLLEKLSASHDHYQEGLTNLKAAITTDHPLYFQFKYARLRADTLRAYSQLLACCSVFKLNPPPSNAFIQASKTGQDPYQFSRVAVQFQNCAAKFSGVAYGYQNLHKVSFNADQTTLNTIRCLQESCQLMVEAIESL-FTPINHQQQQRGSSQGSERSEEEERKTGDNLFCRNVTKTNLHILQQLQ--NSKTEHLSIKNINVLTTIIQSQLNIAFSYPQFFYKRQQNTKIQLSVSPCNHMMEDPFLIHLNHQMTIKVEGVILNQPQSVYFRRASEVRIQLKMRPSDNVKNPSNEHKPVQVEDFV--LKESTPPHYDFFSAQFLVPFKYVGRHTIKISTGLTDEHGVDWDAGPSYTVFV-DVQEP 860
            +NFL+LCVLK  Q S KHL+KI NVDEF +R F+VIHSNDP+AR+ITLR+ G+++ II ERKN HH IR SLDSHD  EVEAA+FA   F+ QS+ FA  I   ++EMI+GL TP+D+KLKLIP+L+ M+HD  +A     + ++L++SYPS   V+ +L+  T LA  +L+  P+QI +LL+Y + +PRK++  +AI +L LLA KTPH WS + +Q+L E      + ++K+  ++VLS L+ +      F+  ++ G    ++  S ++  LA +             ++ L + T    E+    ++ D    ++++L +C  ++S  A      A+   VK   G+   S+ ++  +   L++      + + H L  +A Q+  L    +  LM L K   +   DK QQ+++V L T+IF +S    S     V  + L+ +++        W +YRI RQAS++G  ++A  L + L ++VASE  YFWLNSL+ F   E  L+   + +    L  ++ S   Y +G+ +L AA T  +PL FQ ++ +LR D L+A+SQL+  C+  K +PPP+ A   A   G D  +  R++ Q +    +F  +A  Y +L++ SF+AD  TL  +   Q+SC L+  AIE+L   P +   Q+ GS+  +    E ER        R ++  N H+L++++  N K   +S  +   L   I + L +  S+ ++F+++ Q+T I+L++SP      +P  +  N Q+ +KVEGV+ +  +   FR+   V + +    S  +++ S +   + +++    +++   PH D+FS QFL+ F  +G H I + + + D +G+ W  GP  T+FV  +++P
Sbjct:   76 NNFLRLCVLKVTQQSEKHLEKILNVDEFVKRIFSVIHSNDPVARAITLRMLGSLASIIPERKNAHHSIRQSLDSHDNVEVEAAVFAAANFSAQSKDFAVGICNKISEMIQGLATPVDLKLKLIPILQHMHHDAILASSARQLLQQLVTSYPSTKMVIVSLHTFTLLAASSLVDTPKQIQLLLQYLKNDPRKAVKRLAIQDLKLLANKTPHTWSRENIQALCECALQTPYDSLKLGMLSVLSTLSGTIAIKHYFS--IVPG-NVSSSPRSSDLVKLAQECCYHNNRGIAAHGVRVLTNITVSCQEKDLLALEQDAVFGLESLLVLCSQDDSPGAQATLKIALNCMVKLAKGRPHLSQSVVETLLTQLHSAQDAARILMCHCLAAIAMQLPVLGDGMLGDLMELYKVIGRSATDK-QQELLVSLATVIFVASQKALSVESKAVIKQQLESVSNG-------WTVYRIARQASRMGNHDMAKELYQSLLTQVASEHFYFWLNSLKEFSHAEQCLTGLQEENYSSALSCIAESLKFYHKGIASLTAASTPLNPLSFQCEFVKLRIDLLQAFSQLICTCNSLKTSPPPAIATTIAMTLGNDLQRCGRISNQMKQSMEEFRSLASRYGDLYQASFDADSATLRNVELQQQSCLLISHAIEALILDPESASFQEYGSTGTAHADSEYER--------RMMSVYN-HVLEEVESLNRKYTPVSYMHTACLCNAIIALLKVPLSFQRYFFQKLQSTSIKLALSPSPRNPAEPIAVQNNQQLALKVEGVVQHGSKPGLFRKIQSVCLNV----SSTLQSKSGQDYKIPIDNMTNEMEQRVEPHNDYFSTQFLLNFAILGTHNITVESSVKDANGIVWKTGPRTTIFVKSLEDP 934

The following BLAST results are available for this feature:

BLAST of TCONS_00022343-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00022343-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
INT7	5.761e-156	33.86	Integrator complex subunit 7 OS=Homo sapiens GN=IN...	[more]

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TCONS_00022343-protein (polypeptide) - C. hemisphaerica