TCONS_00023273-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00023273-protein
Unique Name	TCONS_00023273-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	651

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00023273-protein ID=TCONS_00023273-protein|Name=TCONS_00023273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MASKGPKKKESKDQVPSTTKELSQSSNTSQVNDDKTSAKKKSPIPLWPEW
TDQEIANEKWDLAKKEKERGRSPNAAAHYFDDPEGLIDLPITLKTKVHAW
KRPVDIIPDEIVPVVIEPSNTSCSQLDILTPNEHIICSEVICSIVSSITT
LHQFFMPNRDSPAFCPSKFKTNLNIKEPPKDSKADRGAGKKDGDVAAAEE
LPWKPWDLIWPKESTKPGSMPLMNSSGKYVVKLYWMGCYRKITIDDTIPC
DVDMKPLLPFTTNGNELWPMILAKALIKVASLDYFGGREGSEMGEVNFIH
CLTGWMPELIPLDGVYSDKIWKLLLQVLPNWKLPQPPSQQTEEVNTTNVT
ANTSLDVKTLQSLTENQNLGTSKLELNTKESTYKNKKDEKSKDETTKKSK
TNDKDPKTTKEKLQTPNVALKQSNLSQHLIFASFKGSPIISNMNSTTINK
DFADLKRDSAASSKLREFGLIRSLPHPVHVSVARNCPLIPPPTPVQIPRW
KLIRQKKKVETSEPSLHPKEYKEPKFVELKTPFLNFKVRPTPVSSANLIG
SRSSSHTPMASLTEEIMNKDGTIDLPQEQIPTQPNVSSDSTKDMTETKDQ
HQNLDASSNSDVKSERKLSFESQSGTAVTVAPPKSPRHSKSRIAVSSKGR
V

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_013082	XLOC_013082	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00023273	TCONS_00023273	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001300	Peptidase_C2_calpain_cat

Vocabulary: **Molecular Function**
Term	Definition
GO:0004198	calcium-dependent cysteine-type endopeptidase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0005622	intracellular
molecular_function	GO:0004198	calcium-dependent cysteine-type endopeptidase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001300	Peptidase C2, calpain, catalytic domain	PFAM	PF00648	Peptidase_C2	coord: 225..327 e-value: 3.2E-6 score: 26.3
IPR001300	Peptidase C2, calpain, catalytic domain	PROSITE	PS50203	CALPAIN_CAT	coord: 100..326 score: 10.213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 574..651
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..194
None	No IPR available	SUPERFAMILY	54001	Cysteine proteinases	coord: 221..328 coord: 40..159

Blast

[Close]

BLAST of TCONS_00023273-protein vs. Swiss-Prot (Human)
Match: ADGB (Androglobin OS=Homo sapiens GN=ADGB PE=2 SV=3)

HSP 1 Score: 280.796 bits (717), Expect = 2.802e-81
Identity = 204/571 (35.73%), Postives = 301/571 (52.71%), Query Frame = 0

Query:    1 MASKGPKKKE------------SKDQVPSTTKELSQSSNTSQVNDDKTSAKKKSPIPLWPEWTDQEIANEKWDLAKKEKER---GRSPNAAAHYFDDPEGLIDLPITLKTKVHAWKRPVDIIPDEIVPVVIEPSNTSCSQLDILTPNEHIICSEVICSIVSSITTLHQFFMPNRDSPAFCPSKFKTNLNIKEPPKDSKADRGAGKKDGDVAAAEELPWKPWDLIWPKESTKPGSMPLMNSSGKYVVKLYWMGCYRKITIDDTIPCDVDMKPLLPFTTNGNELWPMILAKALIKVASLDYFGGREGSEMGEVNFIHCLTGWMPELIPLDGVYSDKIWKLLLQVLPNWKLPQPPSQQTEEVNTTNVTANTSLDVKTLQSLTENQNLGTSK-----LELNTKESTYKNKKDEKSKDETTKKSKTNDKDPKTTKEKLQT----PNVALKQSNLSQHLIFASFKGSPIISNMNSTTI----NKDFADLKRDSAASSKLREFGLIRSLPHPVHVSVARNCPLIPPPTPVQIPRWKLIRQKKKVETSEPSLHPKEYKEPKFVELKTPFLNFKVRPTPV 543
            MASK  KKKE            SKD  P  +    QS +T Q         KK   PLWPEW++ +I +EKWD  K  KE+   G+SP    H+F+DPEG I+LP +LK  +++WKRP DI+  +  PVV++   T     D+ + NEH++CSE++  I+S I  + + F     +     + FK      EPP                     LPWKPW+ I+       G MPL NS GKYVVKLYWMGC+RKITIDD +P D D   LLP TT   ELWPM+L+KA+IK+A++D     +  E+GE   IH LTGW+PE+I L   Y DK+W+LL ++LP +KL    S +++     +       + K  + + + + +   K       L T ++  K+ K  K K +     K   KD +  K K       P+  ++ S  S     ++ + S ++     T +    NK F+ L++ + ++ KLRE+GL     HPV V+ +R+CPL+ PP P  +P WKLIRQKK+   ++ +      K  +F+E+ +PFLN+++ P  +
Sbjct:    1 MASKQTKKKEVHRINSAHGSDKSKDFYPFGSN--VQSGSTEQ---------KKGKFPLWPEWSEADINSEKWDAGKGAKEKDKTGKSP--VFHFFEDPEGKIELPPSLK--IYSWKRPQDILFSQ-TPVVVKNEIT----FDLFSANEHLLCSELMRWIISEIYAVWKIF-----NGGILSNYFKGTSG--EPPL--------------------LPWKPWEHIYSLCKAVKGHMPLFNSYGKYVVKLYWMGCWRKITIDDFLPFDEDNNLLLPATTYEFELWPMLLSKAIIKLANIDIHVA-DRRELGEFTVIHALTGWLPEVISLHPGYMDKVWELLKEILPEFKLSDEASSESKIAVLDSKLKEPGKEGKEGKEIKDGKEVKDVKEFKPESSLTTLKAPEKSDKVPKEKADARDIGKKRSKDGEKEKFKFSLHGSRPSSEVQYSVQSLSDCSSAIQTSHMVVYATFTPLYLFENKIFS-LEKMADSAEKLREYGLSHICSHPVLVTRSRSCPLVAPPKPPPLPPWKLIRQKKETVITDEAQELIVKKPERFLEISSPFLNYRMTPFTI 522

The following BLAST results are available for this feature:

BLAST of TCONS_00023273-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00023273-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ADGB	2.802e-81	35.73	Androglobin OS=Homo sapiens GN=ADGB PE=2 SV=3	[more]

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TCONS_00023273-protein (polypeptide) - C. hemisphaerica