TCONS_00023298-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023298-protein
Unique NameTCONS_00023298-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length231

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023298-protein ID=TCONS_00023298-protein|Name=TCONS_00023298-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
MIVSASFIPGLVCGSTFLINFVAMYYKASRAIPFGTMVAIAAICLFVILP
LTLVGTVLGRNIMGQPNNPCRVNPVARPIPEKKWFMEPSVIIFLGGILPF
GSIFIEMYFIFTSFWAYKIYYVYGFMLLVFLILATVTVCVTIVCSYFLLN
AEDYRWQWTSFLSAASTAIYVYMYSFYYFFFKTKMFGFFQTVFYFGYMAL
FSAALGIMCGTFGYIGTSLFVWKIYSTVKID
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013102XLOC_013102Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023298TCONS_00023298Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PFAMPF02990EMP70coord: 1..188
e-value: 7.0E-66
score: 222.8

Blast
[Close]
BLAST of TCONS_00023298-protein vs. Swiss-Prot (Human)
Match: TM9S3 (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2)

HSP 1 Score: 358.221 bits (918), Expect = 5.842e-122
Identity = 185/231 (80.09%), Postives = 203/231 (87.88%), Query Frame = 0 
Query:    1 MIVSASFIPGLVCGSTFLINFVAMYYKASRAIPFGTMVAIAAICLFVILPLTLVGTVLGRNIMGQPNNPCRVNPVARPIPEKKWFMEPSVIIFLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFLILATVTVCVTIVCSYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYFFFKTKMFGFFQTVFYFGYMALFSAALGIMCGTFGYIGTSLFVWKIYSTVKID 231
            M + A  IP +VCG+ F INF+A+YY ASRAIPFGTMVA+  IC FVILPL LVGT+LGRN+ GQPN PCRVN V RPIPEKKWFMEP+VI+ LGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFM+LV +IL  VTVCVTIVC+YFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYY+FFKTKM+G FQT FYFGYMA+FS ALGIMCG  GY+GTS FV KIY+ VKID
Sbjct:  359 MFIGAFLIPAMVCGTAFFINFIAIYYHASRAIPFGTMVAVCCICFFVILPLNLVGTILGRNLSGQPNFPCRVNAVPRPIPEKKWFMEPAVIVCLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMMLVLVILCIVTVCVTIVCTYFLLNAEDYRWQWTSFLSAASTAIYVYMYSFYYYFFKTKMYGLFQTSFYFGYMAVFSTALGIMCGAIGYMGTSAFVRKIYTNVKID 589
The following BLAST results are available for this feature:
BLAST of TCONS_00023298-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM9S35.842e-12280.09Transmembrane 9 superfamily member 3 OS=Homo sapie... [more]
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