TCONS_00023299-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023299-protein
Unique NameTCONS_00023299-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length179

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023299-protein ID=TCONS_00023299-protein|Name=TCONS_00023299-protein|organism=Clytia hemisphaerica|type=polypeptide|length=179bp
GIVGEKNEDDVLYMWTHKKFEIGYNGDQIVEINLTSENKVKVEEGGDLPF
TYQVTWKQSQMTYEKRYEKYLDPGFFQHRIHWFSIFNSFMMVIFLVGLVS
MILMRTLRKDYARYSKEDDLDDMERDLGDEYGWKQVHGDVFRMPSYPTIL
CSLIGSGYHLAAVTMCVIGFVIMGDLYMG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013103XLOC_013103Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023299TCONS_00023299Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004240Nonaspanin (TM9SF)PFAMPF02990EMP70coord: 6..175
e-value: 8.1E-49
score: 166.5

Blast
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BLAST of TCONS_00023299-protein vs. Swiss-Prot (Human)
Match: TM9S3 (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.421e-79
Identity = 118/178 (66.29%), Postives = 146/178 (82.02%), Query Frame = 0 
Query:    1 GIVGEKNED-DVLYMWTHKKFEIGYNGDQIVEINLTSENKVKVEEGGDLPFTYQVTWKQSQMTYEKRYEKYLDPGFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEDDLDDMERDLGDEYGWKQVHGDVFRMPSYPTILCSLIGSGYHLAAVTMCVIGFVIMGDLY 177
            GIVGE +E+ +  Y+WT+KK EIG+NG++IV++NLTSE KVK+     +  +Y V WK+S + +E R++KYLDP FFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKE+++DDM+RDLGDEYGWKQVHGDVFR  S+P I  SLIGSG  + AV++ VI   ++ DLY
Sbjct:  141 GIVGEADENGEDYYLWTYKKLEIGFNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIFNSFMMVIFLVGLVSMILMRTLRKDYARYSKEEEMDDMDRDLGDEYGWKQVHGDVFRPSSHPLIFSSLIGSGCQIFAVSLIVIIVAMIEDLY 318
The following BLAST results are available for this feature:
BLAST of TCONS_00023299-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM9S31.421e-7966.29Transmembrane 9 superfamily member 3 OS=Homo sapie... [more]
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