TCONS_00023714-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00023714-protein
Unique NameTCONS_00023714-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length229

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00023714-protein ID=TCONS_00023714-protein|Name=TCONS_00023714-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
MTLFHFGNCLALSIGPYFLLYKSSGLSEYQTVWKLAKAGSAYFLTQLCKM
LVLATFFPMSEGTQQPQMDVVGEFMKSTMDLSDLLGLHLLMLRIPGRGEM
KVLVAGLGWATAEYLTTKLIPLWVGARAIEFNWIHTQLSFDANISLILYL
SVAALIWLWSRTDLQKMYTPVVFVLLMFCSYRPLVLEIVSFAFGLSSWNL
LFFKAIYTSVIGAITLHIYIGLVKTLKTY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013323XLOC_013323Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00023714TCONS_00023714Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019164DUF2053_membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019164Protein of unknown function DUF2053, membranePFAMPF09767DUF2053coord: 2..161
e-value: 8.6E-59
score: 198.2

Blast
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BLAST of TCONS_00023714-protein vs. Swiss-Prot (Human)
Match: TM147 (Transmembrane protein 147 OS=Homo sapiens GN=TMEM147 PE=1 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 2.445e-75
Identity = 109/224 (48.66%), Postives = 149/224 (66.52%), Query Frame = 0 
Query:    1 MTLFHFGNCLALSIGPYFLLYKSSGLSEYQTVWKLAKAGSAYFLTQLCKMLVLATFFPMSEGTQQPQMDVVGEFMKSTMDLSDLLGLHLLMLRIPGRGEMKVLVAGLGWATAEYLTTKLIPLWVGARAIEFNWIHTQLSFDANISLILYLSVAALIWLWSRTDLQKMYTPVVFVLLMFCSYRPLVLEIVSFAFGLSSWNLLFFKAIYTSVIGAITLHIYIGLVK 224
            MTLFHFGNC AL+  PYF+ YK SGLSEY   WK  +AG  Y   QLCKML LATFFP  EG      D +GEFMK+++D++DL+GL+L+M R  G+GE K++VA LGWATAE + ++ IPLWVGAR IEF+W + Q+S D+NISL+ Y+  +A +W+ +R DL   + P V +L+    Y+  V+E       L SW  L  +A+ T ++   TL +Y+ +V 
Sbjct:    1 MTLFHFGNCFALAYFPYFITYKCSGLSEYNAFWKCVQAGVTYLFVQLCKMLFLATFFPTWEGGIY---DFIGEFMKASVDVADLIGLNLVMSRNAGKGEYKIMVAALGWATAELIMSRCIPLWVGARGIEFDWKYIQMSIDSNISLVHYIVASAQVWMITRYDLYHTFRPAVLLLMFLSVYKAFVMETFVHLCSLGSWAALLARAVVTGLLALSTLALYVAVVN 221
The following BLAST results are available for this feature:
BLAST of TCONS_00023714-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TM1472.445e-7548.66Transmembrane protein 147 OS=Homo sapiens GN=TMEM1... [more]
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