TCONS_00024273-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024273-protein
Unique NameTCONS_00024273-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length651

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024273-protein ID=TCONS_00024273-protein|Name=TCONS_00024273-protein|organism=Clytia hemisphaerica|type=polypeptide|length=651bp
MSFVKKVKRLSRFMADENITTKMADAHDEIEEKSNLSSSDEIDETDSPDA
ENWDISLRHGTLSKELKALEYFTANGLRQAFNVLDPKGTGKVTKTQLQIL
CINLCNVINVQFSPEDIMKFKDGEKELQFQDFIAYIGSKLLRKMDEKVVD
STKLDEISWTIVEKQRKAFLTGDKKLTDNELFMIWQAFNKINIDNTVNID
IEETALFLEEFMTAMGTPWTRGPLDDFANGKIKLTFWEFIDCLENKYILS
TPKSVYQFGLDKVNDVYVKEIMKTGLLTKKGHKVKSMKERFFVLSPQLLT
YYEGKSSNGKRKGVIFVAKQSKVEGIDDSKTSKCRFSILCAQKNVPYEME
ACDPKTKNEWIAKVQRCIDCGNLTPLMRELKDRSLERMKRRKKIADEEKS
RLEQEELIRRQLEELELIRLARDEAQAQAENEAALKEEERTRREELELLK
AEYEKLLQEEKQAREVENQVREKQQQILEEEMLKRQELEKIKNEQDRILE
EERKAREGLEELSKEQKKALDDERERLSQLEKARKRAEEQVETFHLKMKE
AEEERRQAALKVELAKEKTRQMKVPVGLAKPLTLEQKMLITHRGAGSFVE
QDFSKRPLYQQTDQPAAEIVNQRKLDEGERTEIVESNLVKPSEGSKHFEV
I
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013625XLOC_013625Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024273TCONS_00024273Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH_dom-like
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 385..568
NoneNo IPR availableGENE3D1.10.238.10coord: 28..157
e-value: 9.4E-7
score: 27.9
NoneNo IPR availableGENE3D1.10.238.10coord: 164..248
e-value: 0.11
score: 11.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 505..526
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..51
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 271..371
e-value: 3.6E-8
score: 43.2
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 272..368
e-value: 1.1E-9
score: 38.6
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 270..369
score: 11.735
IPR011993PH domain-likeGENE3D2.30.29.30coord: 265..373
e-value: 2.3E-16
score: 58.9
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 267..369
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 179..214
score: 5.894
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 72..107
score: 8.265
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 77..146
coord: 183..243

Blast
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BLAST of TCONS_00024273-protein vs. Swiss-Prot (Human)
Match: SWP70 (Switch-associated protein 70 OS=Homo sapiens GN=SWAP70 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.433e-48
Identity = 168/597 (28.14%), Postives = 289/597 (48.41%), Query Frame = 0 
Query:   60 GTLSKELKALEYFTANGLRQAFNVLDPKGTGKVTKTQLQILCINLCNVINVQFSPEDIMKF--KDGEKELQFQDFIAYIGSKLLRKMDEKVVDSTKLDEISWTIVEKQRKAFLTGDKKL-TDNELFMIWQAFNKINIDNTVNIDI-EETALFLEEFMTAMGTPWTRGPLD----DFANGKIKLTFWEFIDCLEN-KYILSTPKSVYQFGLDKVNDVYVKEIMKTGLLTKKGHKVKSMKERFFVLSPQLLTYYEGKSSNGKRKGVIFVAKQSKVEGIDDSKTSKCRFSILCAQKNVPYEMEACDPKTKNEWIAKVQRCIDCGNL--TPLMRELKDRSLERMKRRKKIADEE-------------KSRLEQEELIRRQLE--------------------------ELELIRLARDEAQAQAENEAALKEEERTRREELELLKAEYEKLLQEEKQAREVENQVREKQQQILEEEMLKRQELEKIKNEQDRILEEERKAREGLEELSKEQKKALDDERERLSQLEKARKRAEEQVETFHLKMKEAEEERRQAALKVELAKEKTRQMKVPVGLAKPLTLEQKMLITHRGAGSFVEQDFSKR 606
            G+L +EL          +  AF  LD   +GKV+K+QL++L  NLC V+ V   P  + +    D E  +  Q ++ Y+   +L K+ +   D  + + + WT+  K+    LT +  L T+ + F IW  FN ++ D    I + EE    L++   AMG  W +   +    +F + K  L+ WE I+ + N ++     +      +++V +  + +++K G + KKGH+ K+  ER+FVL P +++YY  +    K KG I + +   VE + D    KC F + C  K   +E+ A D K K EWI  +   I    L   P  +E + R  E   R+K++A++E             +S+ ++ E +R++LE                          ELE  +L R + + Q   +++  E+   R  ELE +  + ++ L++E+QAR+ E  VR+ Q ++LEEE  KR ELEK   EQ + ++     ++ LE     +++AL +  E+L QLE  RK+A EQ E       E +++   A  K +  K+K    +  + L +P + +   LIT+ G  +F E +  +R
Sbjct:    2 GSLKEEL-------LKAIWHAFTALDQDHSGKVSKSQLKVLSHNLCTVLKVPHDPVALEEHFRDDDEGPVSNQGYMPYLNRFILEKVQDNF-DKIEFNRMCWTLCVKKN---LTKNPLLITEEDAFKIWVIFNFLSEDKYPLIIVSEEIEYLLKKLTEAMGGGWQQEQFEHYKINFDDSKNGLSAWELIELIGNGQFSKGMDRQTVSMAINEVFNELILDVLKQGYMMKKGHRRKNWTERWFVLKPNIISYYVSEDLKDK-KGDILLDENCCVESLPDKDGKKCLFLVKCFDKT--FEISASDKKKKQEWIQAIHSTIHLLKLGSPPPHKEARQRRKEL--RKKQLAEQEELERQMKELQAANESKQQELEAVRKKLEEAASRAAEEEKKRLQTQVELQARFSTELEREKLIRQQMEEQVAQKSSELEQYLQRVRELEDMYLKLQEALEDERQARQDEETVRKLQARLLEEESSKRAELEKWHLEQQQAIQTTEAEKQELENQRVLKEQALQEAMEQLEQLELERKQALEQYE-------EVKKKLEMATNKTKSWKDKVAHHEGLIRLIEPGS-KNPHLITNWGPAAFTEAELEER 574
The following BLAST results are available for this feature:
BLAST of TCONS_00024273-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SWP709.433e-4828.14Switch-associated protein 70 OS=Homo sapiens GN=SW... [more]
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