TCONS_00024650-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00024650-protein
Unique NameTCONS_00024650-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length378

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00024650-protein ID=TCONS_00024650-protein|Name=TCONS_00024650-protein|organism=Clytia hemisphaerica|type=polypeptide|length=378bp
MDEFLNKHIQEIIANDSKSQLNFSTALTFDNLDWFSPDELFDGNPESENS
PVNVEQDFHHQQNINTNNLYPSPQRLYSSSSSTTSSVYSASEISERSPPS
PPSPTIPPLIQHQPSPPHQQPKIKCPTPPQPMEEEDIKPNPEALNSMIDV
ESFKTLQKLHNIPTVSSIEELQKYQKLGVPALLLFYPQKNTTDSTTKEED
KNKLKTPEDLFKNTKKIPVLNVSGDVIKIEPKSPKETTKTTTTANEDTRE
RIHVCPYPNCDKTYFKNSHLKTHIRSHTGEKPFKCVWPDCDRSFARSDEL
ARHKRSHTGERKFECPLCSRKFMRSDHLTKHAKRHMQAKKIPGWQREINK
LNEMASVTYQYPSIISEQTMSRNKMQIE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_013839XLOC_013839Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00024650TCONS_00024650Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 313..335
e-value: 0.012
score: 24.8
coord: 283..307
e-value: 8.7E-4
score: 28.6
coord: 253..277
e-value: 0.013
score: 24.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 315..335
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 285..307
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 255..277
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 253..282
score: 14.503
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 283..312
score: 14.898
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 313..340
score: 12.009
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 263..322
NoneNo IPR availableGENE3D3.30.160.60coord: 291..303
e-value: 7.3E-14
score: 51.0
NoneNo IPR availableGENE3D2.20.25.10coord: 304..317
e-value: 0.0054
score: 16.2
NoneNo IPR availableGENE3D3.30.160.60coord: 54..265
e-value: 3.0E-9
score: 36.3
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 313..335
e-value: 4.5E-4
score: 20.4
coord: 283..307
e-value: 2.6E-5
score: 24.3
coord: 253..277
e-value: 0.0023
score: 18.2
NoneNo IPR availableGENE3D3.30.160.60coord: 318..373
e-value: 6.0E-10
score: 38.4
NoneNo IPR availableGENE3D2.20.28.30coord: 266..290
e-value: 1.8E-11
score: 43.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..136

Blast
[Close]
BLAST of TCONS_00024650-protein vs. Swiss-Prot (Human)
Match: KLF11 (Krueppel-like factor 11 OS=Homo sapiens GN=KLF11 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 7.270e-54
Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 0 
Query:  248 TRERIHVCPYPNCDKTYFKNSHLKTHIRSHTGEKPFKCVWPDCDRSFARSDELARHKRSHTGERKFECPLCSRKFMRSDHLTKHAKRHMQAKKIPGWQREINKLNEMASV 357
            +R R +VC +P C KTYFK+SHLK H+R+HTGEKPF C W  CD+ FARSDEL+RH+R+HTGE+KF CP+C R+FMRSDHLTKHA+RHM  KKIPGWQ E+ KLN +AS 
Sbjct:  389 SRRRNYVCSFPGCRKTYFKSSHLKAHLRTHTGEKPFNCSWDGCDKKFARSDELSRHRRTHTGEKKFVCPVCDRRFMRSDHLTKHARRHMTTKKIPGWQAEVGKLNRIASA 498
The following BLAST results are available for this feature:
BLAST of TCONS_00024650-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KLF117.270e-5468.18Krueppel-like factor 11 OS=Homo sapiens GN=KLF11 P... [more]
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