TCONS_00026052-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00026052-protein
Unique Name	TCONS_00026052-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1216

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00026052-protein ID=TCONS_00026052-protein|Name=TCONS_00026052-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1216bp
MATKSKSTSSSRISMVIHSLTVTWAEFCHLLKDNHKDSARHLSDLNTSCS
KLQQLLSTQEKCCRMLFSGHKADIPLLFDILQYFSKVDHIICTCILDCLH
CLCNTAKRVTYLSEMGLVCVLSDCLVNATNTFFNLHEASSLEDLFYFFHY
ILNKLAKDKRLVTISRLSGAVSASVVVLKNYDSSGKVFHVVLNVMKIYSS
SPASCSIMARGSVIPALIKLIPSCGNRKIQLLKMSLELLSTLCKSKTGAK
KAVCMGAIPTLLELYHEWQKVDHRNRQISLRKAILNVIKTLIGYAFGRKS
FSSADGFRTLYFLGLEGIESRECEPLIKIVSVILRKCVKSKKIALTKQSS
VYSVTLPQSMESLLSASEGFGEDRSASDSDAMDEDIQPASSDEEEAYTED
EMEHPPTTPVQSSTALAAHLTTATTFQEPSYNANTEHNSKNHYSNNSDDV
TAIASHHSSSSTSTAGGSNESESSLHSLCDTERFREFLQELDLYEDDDVH
QSIHIPTASLETSFQSVEKANSLNGNCDFDGKTTCSHQLITTSEKNNKSN
ASGGGSSPLLERLKKFHIGRNHGKSTEPEEISSFRDRPRTTVHSTARMWS
VEQSRVCPTLHNDSTSSVLNQSGSTFNQLNCRIQHVSEFVKIPEPTTLGH
YPPSTLEPLLPRKTNLQKQMLFTDLSRQIFPDRVIKRVVYDLDELTKNTP
PVTPNVSATNLLSSPPTSTNRIVPVLRKSQSAPKLSIHHLNAATLQRISK
EDVANSKPLSFESRFECGNLRKAIQIRQYEYDLILNSDTNTCGHHQWFYF
QVQNMEVNVEYRFNIINCEKPNSQFNYGMTSLMYSVVNAKRGNPSWHRTG
TNVCYYRNYFVRGVGSSKSYFTATFTISFPHKNDTCFLAYHYPYSLSMLK
MDVLRMEASLCQHIIYSNQVLCQTLGGNDVNLLTITNPSISATRRDIIKR
PYVVLTARVHPGESNSSWIMKGILDFLTSSDTLARQLRSIYIFKIVPMLN
PDGVVNGCHRCSLTGQDLNRQWKHPDPILHPSIYHVKTLIQSMTAAGKKP
MLFVDFHGHSRKKNVFMYGCQEKQPETTLSATDERGDSLQTSCNSSSKSK
GSTSMSSTTFRDDRSSYCSNLDFYNEDSVIKLFPRILSSVSPYFSLQNCN
YAMEKSKEATARIVGFRELGIDRSYTLESSYSGMDQGEYAITIAKWMSAR
EFLNIDQKWRPRPATR

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_014658	XLOC_014658	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00026052	TCONS_00026052	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000834	Peptidase_M14
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0004181	metallocarboxypeptidase activity
GO:0005488	binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0005488	binding
molecular_function	GO:0004181	metallocarboxypeptidase activity
molecular_function	GO:0008270	zinc ion binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000834	Peptidase M14, carboxypeptidase A	PFAM	PF00246	Peptidase_M14	coord: 921..1102 e-value: 1.6E-13 score: 51.0
None	No IPR available	GENE3D	3.40.630.10		coord: 887..1205 e-value: 3.3E-50 score: 170.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 570..589
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1077..1112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 368..413
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 454..477
None	No IPR available	SUPERFAMILY	53187	Zn-dependent exopeptidases	coord: 885..1069 coord: 1118..1185
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 23..355 e-value: 1.1E-9 score: 37.4
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 42..311

Blast

[Close]

BLAST of TCONS_00026052-protein vs. Swiss-Prot (Human)
Match: CBPC1 (Cytosolic carboxypeptidase 1 OS=Homo sapiens GN=AGTPBP1 PE=1 SV=3)

HSP 1 Score: 482.256 bits (1240), Expect = 9.959e-150
Identity = 262/603 (43.45%), Postives = 343/603 (56.88%), Query Frame = 0

Query:  600 SVEQSRV----CPTLHNDSTSSVLNQSGSTFNQLNCRIQHVSEFVKIPEPTTLGHYPPSTLEPLLPRKTNLQKQMLFTDLSRQIFPDRVIKRVVYDLDELTKNTPPVTPNVSATNLLSSPPTSTNRIVPVLRKSQSAPKLSIHHLNAATLQRISKEDVANSKPLSFESRFECGNLRKAIQIRQYEYDLILNSDTNTCGHHQWFYFQVQNMEVNVEYRFNIINCEKPNSQFNYGMTSLMYSVVNAKRGNPSWHRTGTNVCYYRNYFVR-----GVGSSKSYFTATFTISFPHKNDTCFLAYHYPYSLSMLKMDVLRME-ASLCQHIIYSNQVLCQTLGGNDVNLLTITNPSISATRRDII---KRPYVVLTARVHPGESNSSWIMKGILDFLTSSDTLARQLRSIYIFKIVPMLNPDGVVNGCHRCSLTGQDLNRQWKHPDPILHPSIYHVKTLIQSMTAAGKKPMLFVDFHGHSRKKNVFMYGCQEKQPETTLSATDERGDSLQTSCNSSSKSKGSTSMSSTTFRDDRSSYCSNLDFYNEDSVIKLFPRILSSVSPYFSLQNCNYAMEKSKEATARIVGFRELGIDRSYTLESSYSGMDQGEY 1189
            SVEQ+ V     PTLH+             + ++    + V E+ ++  P   GH PP   EP+L R   +Q+  +  D+ R I    +I RVVYD                    L +P    N  +P                         + D+     L F S+FE GNLRK IQIR+ EYDLILNSD N+  +HQWFYF+V  M   V YRFNIINCEK NSQFNYGM  LMYSV  A    P W R GT++CYY+N+F R     G    KSY+T TFT++FPHK+D C+ AYHYPY+ S L+M + ++E A   Q I +   VLC+TL GN   L+TIT    S     I     RPYV L+ARVHPGE+N+SW+MKG L++L S++  A+ LR  YIFKIVPMLNPDGV+NG HRCSL+G+DLNRQW+ P P LHP+IYH K L+Q + A  + P+++ D+HGHSRKKNVFMYGC  K  ET     D       TSC+                               ED+  +  P+ILS ++P F + +C++ +EKSKE+TAR+V +RE+G+ RSYT+ES+  G DQG+Y
Sbjct:  610 SVEQASVEVPDGPTLHDPDL----------YIEIVKNTKSVPEYSEVAYPDYFGHIPPPFKEPILERPYGVQRTKIAQDIERLIHQSDIIDRVVYD--------------------LDNP----NYTIP------------------------EEGDI-----LKFNSKFESGNLRKVIQIRKNEYDLILNSDINSNHYHQWFYFEVSGMRPGVAYRFNIINCEKSNSQFNYGMQPLMYSVQEALNARPWWIRMGTDICYYKNHFSRSSVAAGGQKGKSYYTITFTVNFPHKDDVCYFAYHYPYTYSTLQMHLQKLESAHNPQQIYFRKDVLCETLSGNSCPLVTITAMPESNYYEHICHFRNRPYVFLSARVHPGETNASWVMKGTLEYLMSNNPTAQSLRESYIFKIVPMLNPDGVINGNHRCSLSGEDLNRQWQSPSPDLHPTIYHAKGLLQYLAAVKRLPLVYCDYHGHSRKKNVFMYGCSIK--ETVWHTNDN-----ATSCDVV-----------------------------EDTGYRTLPKILSHIAPAFCMSSCSFVVEKSKESTARVVVWREIGVQRSYTMESTLCGCDQGKY 1113

HSP 2 Score: 139.428 bits (350), Expect = 3.864e-33
Identity = 99/353 (28.05%), Postives = 180/353 (50.99%), Query Frame = 0

Query:    8 TSSSRISMVIHSLTVTWAEFCHLLKDNHKDSARHLSDLNTSCSKLQQLLSTQEKCCRMLFSGHKADIPLLFDILQYFSKVDHIICTCILDCLHCLCNTA--KRVTYLSEMGLVCVLSDCLVNATNTFFNLHEASSLEDLFYFFHYILNKLA-KDKRLVTISRLSGAVSASVVVLKNYDSSGKVFHVVLNVMKIYSSSPASCSIMARGSVIPALIKLIPSCGNRKIQLLKMSLELLSTLCKSKTGAKKAVCMGAIPTLLELYHEWQKVDHRNRQISLRKAILNVIKTLIGYAFGRKSFSSADGFRTLYFLGLEGIESRECEPLIKIVSVILRKCVKSKKIALTKQSSVYSVTLP 357
            T++SRI  ++  L    AE       +  D+AR+++      SK+  L  +QEK  R + +     + +L   L+  +  D      IL  L  L +    +RV++L   G   +L   L+NA+       E+   EDL    H IL K+  KDK+    +R++GA++ ++ ++K    + ++    L ++++YS++  +   + +  V+  + K+I     +   L+K++L+ L+ L KSKT A++AV  G +  LL +Y +W + D+R+R + +RK IL  +K++     GRK+F  A+G + LY    E +  R  +PL+   S+I+RKC    ++ L    S +   LP
Sbjct:   13 TNNSRIVGLLAQLEKINAE------PSESDTARYVT------SKILHLAQSQEKTRREMTAKGSTGMEILLSTLE--NTKDLQTTLNILSILVELVSAGGGRRVSFLVTKGGSQILLQLLMNASK------ESPPHEDLMVQIHSILAKIGPKDKKFGVKARINGALNITLNLVKQNLQNHRLVLPCLQLLRVYSANSVNSVSLGKNGVVELMFKIIGPFSKKNSSLIKVALDTLAALLKSKTNARRAVDRGYVQVLLTIYVDWHRHDNRHRNMLIRKGILQSLKSVTNIKLGRKAFIDANGMKILYNTSQECLAVRTLDPLVNTSSLIMRKCFPKNRLPLPTIKSSFHFQLP 345

The following BLAST results are available for this feature:

BLAST of TCONS_00026052-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00026052-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CBPC1	9.959e-150	43.45	Cytosolic carboxypeptidase 1 OS=Homo sapiens GN=AG...	[more]

You are here

TCONS_00026052-protein (polypeptide) - C. hemisphaerica