TCONS_00027980-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00027980-protein
Unique Name	TCONS_00027980-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	576

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00027980-protein ID=TCONS_00027980-protein|Name=TCONS_00027980-protein|organism=Clytia hemisphaerica|type=polypeptide|length=576bp
MLLELFKISLLIAMVKTQGNSNLDSLVTIGSLKRTSPKQISCKYTNRNGG
TSISRTTFCPEDSSCVALRLYKHQPSTGWVEEREYKGCLPTFSQNKKLYK
DMVCPKKPDLTGFCYLQKLTAYVQKDSNRQYLYCCCRGNNCNKLLVTNPQ
TQWPETTLEPKSKQEKTKNSTMFLTAIISSVTFFLIVFCFAVVYTTHKIS
KRRRQPNRDNQSLMMRTELLLPSPKTMSDEALDNIMRGNLIHQGTISAVR
LATLDGKEVSVKIYQPRSKNQWTNEKEIYELLGEHPNVAKFITSERIPQD
FGFEGIIVMEYYTQGSLLNYLRNNTLSWVQMIRLACCISKGLSFLHRETN
KDGSSKVSIAHRDLTSRNVLMKKDGTCVLADFGYALRLKGKYLNGKFPLV
GSPRYMAPEMLDGSIMQRDWVTAFKQADCYGLALLLWELSRRCRDIIDID
GEVPECLLPFEEELGSGPSVNKVHGYVCVKQYRPQFPSQWIQNNMALELL
KQTITECWDQEADARLTPSCVLNRLKQMIDSEQNSYHDSSNSSRECLMLI
SQNTDLVVPSSRSDVYDPKLVTTVKS

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_015832	XLOC_015832	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00027980	TCONS_00027980	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000333	TGFB_receptor
IPR001245	Ser-Thr/Tyr_kinase_cat_dom
IPR000719	Prot_kinase_dom
IPR011009	Kinase-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004702	signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0005524	ATP binding
GO:0004672	protein kinase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0006468	protein phosphorylation

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0007178	transmembrane receptor protein serine/threonine kinase signaling pathway
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0004702	signal transducer, downstream of receptor, with serine/threonine kinase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000333	Ser/Thr protein kinase, TGFB receptor	PRINTS	PR00653	ACTIVIN2R	coord: 372..393 score: 40.61 coord: 496..515 score: 52.0 coord: 122..145 score: 37.78
None	No IPR available	GENE3D	3.30.200.20		coord: 148..328 e-value: 1.3E-13 score: 50.4
None	No IPR available	GENE3D	1.10.510.10		coord: 329..536 e-value: 3.2E-31 score: 107.6
IPR001245	Serine-threonine/tyrosine-protein kinase, catalytic domain	PFAM	PF07714	Pkinase_Tyr	coord: 241..521 e-value: 1.9E-24 score: 86.3
IPR000719	Protein kinase domain	PROSITE	PS50011	PROTEIN_KINASE_DOM	coord: 235..529 score: 31.255
IPR011009	Protein kinase-like domain	SUPERFAMILY	56112	Protein kinase-like (PK-like)	coord: 209..525

Blast

[Close]

BLAST of TCONS_00027980-protein vs. Swiss-Prot (Human)
Match: BMPR2 (Bone morphogenetic protein receptor type-2 OS=Homo sapiens GN=BMPR2 PE=1 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 7.560e-77
Identity = 154/414 (37.20%), Postives = 228/414 (55.07%), Query Frame = 0

Query:  128 NRQYLYCCCRGNNCNKLLVTNPQTQWPETTLEPKSKQEK-TKNSTMFLT-AIISSVTFFLIVFCFAVVYTTHKISKRRRQPNRDNQSLMMRTELLLPSPKTMSDEALDNIMRGNLIHQGTISAVRLATLDGKEVSVKIYQPRSKNQWTNEKEIYEL-LGEHPNVAKFITS-ERIPQDFGFEGIIVMEYYTQGSLLNYLRNNTLSWVQMIRLACCISKGLSFLHRETNKDGSSKVSIAHRDLTSRNVLMKKDGTCVLADFGYALRLKGKYL-------NGKFPLVGSPRYMAPEMLDGSIMQRDWVTAFKQADCYGLALLLWELSRRCRDIIDIDGE-VPECLLPFEEELGSGPSVNKVHGYVCVKQYRPQFPSQWIQNNMALELLKQTITECWDQEADARLTPSCVLNRLKQMI 529
            N  Y +CCC  + CN     N    +P     P S      ++ T+ +  A +S +   ++  CF     T     R++  +  N   MM      PS        LDN+    LI +G   AV   +LD + V+VK++   ++  + NEK IY + L EH N+A+FI   ER+  D   E ++VMEYY  GSL  YL  +T  WV   RLA  +++GL++LH E  +    K +I+HRDL SRNVL+K DGTCV++DFG ++RL G  L       N     VG+ RYMAPE+L+G++  RD  +A KQ D Y L L+ WE+  RC D+    GE VPE  + F+ E+G+ P+   +   V  ++ RP+FP  W +N++A+  LK+TI +CWDQ+A+ARLT  C   R+ +++
Sbjct:  110 NGTYRFCCCSTDLCNVNFTEN----FPPPDTTPLSPPHSFNRDETIIIALASVSVLAVLIVALCFGYRMLT---GDRKQGLHSMN---MMEAAASEPSLD------LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLCKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDCESALKQVDMYALGLIYWEIFMRCTDL--FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQCAEERMAELM 505

The following BLAST results are available for this feature:

BLAST of TCONS_00027980-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00027980-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
BMPR2	7.560e-77	37.20	Bone morphogenetic protein receptor type-2 OS=Homo...	[more]

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TCONS_00027980-protein (polypeptide) - C. hemisphaerica