TCONS_00028852-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00028852-protein
Unique NameTCONS_00028852-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length768

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00028852-protein ID=TCONS_00028852-protein|Name=TCONS_00028852-protein|organism=Clytia hemisphaerica|type=polypeptide|length=768bp
MSSKQEIQDVNTRFKRTRRYDTAGKYRIGPTFITKARLSYLDANKPAKLS
VIPDPSFKSLEFGLLTYLWTFTDQHDKTEIDLAFLQSLINSGVDINAADE
YGQTALHAMVRDWHPDVVSFIVRNNADVNKADKWGRTPLHLAAAINSVEI
AKILCLSGARVDLETDSEHQTPMHYAAKYNSLATMKLLIKFDGSITQRDA
QNRTVLFLAAEQGSTETAQFLLDIGAPAGIYDSEGNSCISYLLEKMPHVA
YCALHQFVVTNMSLKQSHMYLKHLENSTKGKTAMIQKSPLEIITIYDDTE
LVMHPVIQKAIDIKWKLFGRMDTVRKLFITLIYLVCWLVLAYTFRDDNTY
YRPWSSQGWKIAFELLVVAFAIYFFYKDVMIKKDAMKYHTAWVEWRQHLI
RSNYRYCHPSWPNDRENLEAETERIRSVPSLGSKEKTWFLYEWFMLIVLA
AIIATRILTMTVDSKPLFIAHKCIFGVGIIFSFLRVLKILNRFRFFAVFL
KISSLVLLTTVQVSLLYIQLYIPFTAVFWLNFGNNEVLTEIQNLDPEHTQ
HKVQWTNLKNDTNSLVGMNNIFYHVYTSSFGQGMLGYFVEVKKTEAQTLI
TLYHIFVSFIIFSVFVALITSKFTTHYSRMVAEASLLRASIVLQLEKNLK
KEDKAKLTRYYKQYCNPLVVPMEAYTETILKRNALSKLRLSERRLNGIEN
IVTEAEMRFLANDQKNQKSVLESIASVIALLQQQEKDMNSKLETNLKELT
SKQEYMNKYLPKLLKLTS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_016372XLOC_016372Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00028852TCONS_00028852Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 732..752
NoneNo IPR availableGENE3D1.10.287.70coord: 321..628
e-value: 1.6E-5
score: 23.9
NoneNo IPR availableCDDcd00204ANKcoord: 96..222
e-value: 9.10241E-32
score: 119.796
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 101..130
e-value: 0.31
score: 20.1
coord: 201..232
e-value: 1.5
score: 17.8
coord: 134..163
e-value: 0.0054
score: 25.9
coord: 168..197
e-value: 0.0062
score: 25.8
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 134..166
score: 11.648
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 168..200
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 201..233
score: 9.484
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 101..133
score: 10.766
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 84..163
e-value: 3.1E-11
score: 43.6
coord: 168..226
e-value: 1.5E-10
score: 41.4
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 78..175
e-value: 1.1E-29
score: 102.2
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 176..270
e-value: 2.8E-17
score: 62.2
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 81..237
score: 41.354
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 83..241

Blast
[Close]
BLAST of TCONS_00028852-protein vs. Swiss-Prot (Human)
Match: ANR35 (Ankyrin repeat domain-containing protein 35 OS=Homo sapiens GN=ANKRD35 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.905e-17
Identity = 51/156 (32.69%), Postives = 81/156 (51.92%), Query Frame = 0 
Query:   88 LINSGVDINAADEYGQTALHAMVRDWHPDVVSFIVRNNADVNKADKWGRTPLHLAAAINSVEIAKILCLSGARVDLETDSEHQTPMHYAAKYNSLATMKLLIKFDGSITQRDAQNRTVLFLAAEQGSTETAQFLLDIGAPAGIYDSEGNSCISYLL 243
            L+ +G DIN+ +E G TALH       P  V  ++++ A+ +  D   R+PLH AA+        +LC   A +D+  D++ +TP+  A+     A    L++    +   D  +++ L LA E+GS E A+ LL  GA AG  DS G+  + Y L
Sbjct:   73 LLANGADINSKNEDGSTALHLATISCQPQCVKVLLQHGANEDAVDAENRSPLHWAASSGCASSVLLLCDHEAFLDV-LDNDGRTPLMIASLGGHAAICSQLLQRGARVNVTDKNDKSALILACEKGSAEVAELLLSHGADAGAVDSTGHDALHYAL 227
The following BLAST results are available for this feature:
BLAST of TCONS_00028852-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR353.905e-1732.69Ankyrin repeat domain-containing protein 35 OS=Hom... [more]
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