TCONS_00045668-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00045668-protein
Unique NameTCONS_00045668-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length485

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00045668-protein ID=TCONS_00045668-protein|Name=TCONS_00045668-protein|organism=Clytia hemisphaerica|type=polypeptide|length=485bp
KHEDEECKVPCDYWQYGCHEMIHKRHMERHLANSARRHIELVKAYYDRIV
AEKEKRLVMKNKAIAEKDKLLGEKNSSLVEKDKSLAEKDKLLVGKDESLT
EKNRLLAEKDKSLAEKDKLLVEKDESLTEKNRSLAEKDKSLAEKNRSLAE
KEKSLAEKNRSIIGGEGQIIGRKKSIDYWRRRTNHWPKKIDRLLAEKDKS
LAEKNRSIIGGEGQIIGRKKSIDYWRRRTNHWPKKIDRLLAEKDKEIGLN
TTIVLQSERITELEGNKIPIATGGSKPTEKQQVTKPKPLPRTGIQLYDSQ
EQVTPKPAQPTTTKWDGKKIHEIVFQGKRLSFDDVWKILSEKNFTKFEEI
FQQNPNIVNSLRDSFDQTLLMKAVYEDRFDVFVHLMDYPHDFSLVDNDGE
NVLHFVGSHGTVRYLEKFDQQTIKMLINGRDKSNNDTPLHYAASWNKHDV
IRWLLAKGANPELKNNRGQRPDERGCCDGVTKEIF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029195XLOC_029195Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00045668TCONS_00045668Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..290
NoneNo IPR availableCDDcd00204ANKcoord: 362..471
e-value: 7.46789E-18
score: 78.5794
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 365..394
e-value: 320.0
score: 8.7
coord: 434..463
e-value: 5.2E-6
score: 36.0
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 434..466
score: 12.823
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 331..475
e-value: 5.2E-22
score: 77.6
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 370..465
e-value: 1.7E-10
score: 41.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 365..471
score: 17.714
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 342..471

Blast
[Close]
BLAST of TCONS_00045668-protein vs. Swiss-Prot (Human)
Match: MAP1A (Microtubule-associated protein 1A OS=Homo sapiens GN=MAP1A PE=1 SV=6)

HSP 1 Score: 82.8037 bits (203), Expect = 1.402e-16
Identity = 52/125 (41.60%), Postives = 84/125 (67.20%), Query Frame = 0 
Query:   38 HIELVKAYYDRIVAEKEKRLVMKNKAIAEKDKLLGEKNSSLVEKDKSLAEKDKLLVGKDESLTEKNRLLAEKDKSLAEKDKLLVEKDESLTEKNRSLAEKDKSLAEKNRSLAEKEKSLAEKNRSI 162
            H E+V+   D  + +K++ L +KN+A+ ++DK L +K   L +KD +L +KDK L  KD+ L EK++ L +KDK   EKDK L +KD +L +K+++L  KDK L +K+R L +KEK   EK++++
Sbjct: 1376 HKEVVEPK-DTAIYQKDEALHVKNEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKALEQKDTALEQKDKALEPKDKDLEQKDRVLEQKEKIPEEKDKAL 1499
The following BLAST results are available for this feature:
BLAST of TCONS_00045668-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAP1A1.402e-1641.60Microtubule-associated protein 1A OS=Homo sapiens ... [more]
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