TCONS_00046219-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00046219-protein
Unique NameTCONS_00046219-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length306

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00046219-protein ID=TCONS_00046219-protein|Name=TCONS_00046219-protein|organism=Clytia hemisphaerica|type=polypeptide|length=306bp
MADNFRMLYYDTLGLKNVDQKKTLELLLSENPLSTDKLKHFSHKFTLPAI
YRSLVWKVQLGISPTCKESSEFVNTQRQGHYEDLKQALITMQMLNDHGET
NRSNLNPRDIVLMYLLDFGQLSVLHGNILKRDGHKVFVLESISQAVCGVV
SDECDCFWITKHLYNRQEQLYESFSKLPQYVKYYSQLEDQRLFEHLCEIQ
LFKVLPYDRWFQTYFASVFADCLEYLERILDKIVAGSCNILLFVCVALLL
TFSLKLKQVRSSEEALKMISHLQEEAGLAVVDKTMELWEQHRNSLCAEIG
CHNHDH
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_029518XLOC_029518Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00046219TCONS_00046219Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000195Rab-GTPase-TBC_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 149..255
e-value: 2.7E-8
score: 33.6
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 46..237
score: 10.402
IPR000195Rab-GTPase-TBC domainSUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 187..274

Blast
[Close]
BLAST of TCONS_00046219-protein vs. Swiss-Prot (Human)
Match: TBCD7 (TBC1 domain family member 7 OS=Homo sapiens GN=TBC1D7 PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.466e-59
Identity = 108/289 (37.37%), Postives = 167/289 (57.79%), Query Frame = 0 
Query:    4 NFRMLYYDTLGLKNVDQKKTLELLLSENPLSTDKLKHFSHKFTLPAIYRSLVWKVQLGISPTCKESSEFVNTQRQGHYEDLKQALITMQMLNDHGETNRSNLNPRDIVLMYLLDFGQLSVLHGNILKRDGHKVFVLESISQAVCGVVSDECDCFWITKHLYNRQEQLY-ESFSKLPQYVKYYSQLEDQRLFEHLCEIQLFKVLPYDRWFQTYFASVFADCLEYLERILDKIVAGSCNILLFVCVALLLTFSLKLKQVRSSEEALKMISHLQEEAGLAVVDKTMELWEQH 291
            NFR +YY+ +G + V++KK+LE+LL ++ L T+KL  FS +F LP++YR+LVWKV LGI P   ES   V   R+  Y D+  AL  ++ ++D        L       MY L+ G+L       L+ D     V  +I++A+  +V D  DC+WIT+   N+    Y +S  +LP+  + Y  LED RL  HL        LPYD WF+  FA    +    L+R+ DK+V+GSC IL+FV V +LLTF +K+  + S+E+  K + ++ +++  A+V K ++LW +H
Sbjct:    8 NFRSVYYEKVGFRGVEEKKSLEILLKDDRLDTEKLCTFSQRFPLPSMYRALVWKVLLGILPPHHESHAKVMMYRKEQYLDVLHALKVVRFVSDATPQAEVYLR------MYQLESGKLPRSPSFPLEPDDE---VFLAIAKAMEEMVEDSVDCYWITRRFVNQLNTKYRDSLPQLPKAFEQYLNLEDGRLLTHLRMCSAAPKLPYDLWFKRCFAGCLPE--SSLQRVWDKVVSGSCKILVFVAVEILLTFKIKVMALNSAEKITKFLENIPQDSSDAIVSKAIDLWHKH 285
The following BLAST results are available for this feature:
BLAST of TCONS_00046219-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TBCD76.466e-5937.37TBC1 domain family member 7 OS=Homo sapiens GN=TBC... [more]
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