TCONS_00065632-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00065632-protein
Unique NameTCONS_00065632-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length194

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00065632-protein ID=TCONS_00065632-protein|Name=TCONS_00065632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=194bp
PIVVQKFKTFSRNVQQKSACRQNVPVLALSATIDLDLQSLVKSSCNLSKS
VKIISTCSNRDNIFLGVKKVPKQENIECLQWIVNLLSVKGFDTPKIVVFC
RSVDTAGLVYNELKRFLSKRNSEIDPKELIGIFHSNTKPKKKEVVMTTLT
TLDCPMRVVVATSSLGCGINMKNVKYIVHFGLAYHLVDYCQQIG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041120XLOC_041120Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00065632TCONS_00065632Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 111..194
e-value: 0.006
score: 25.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 83..194
e-value: 4.3E-10
score: 39.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 77..194
score: 9.672
NoneNo IPR availableGENE3D3.40.50.300coord: 60..194
e-value: 9.4E-16
score: 57.3
NoneNo IPR availableCDDcd00079HELICccoord: 70..194
e-value: 2.30598E-10
score: 53.7809
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..51
score: 6.988
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 17..194

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00065632-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top