Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00008981 ID=TCONS_00008981|Name=TCONS_00008981|organism=Clytia hemisphaerica|type=transcript|length=3026bpRun BLAST on NCBI transcript from alignment at sc0000089:237290..243723+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00008981 ID=TCONS_00008981|Name=TCONS_00008981|organism=Clytia hemisphaerica|type=transcript|length=6434bp|location=Sequence derived from alignment at sc0000089:237290..243723+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2 Blast
BLAST of TCONS_00008981 vs. Swiss-Prot (Human)
Match: FACE2 (CAAX prenyl protease 2 OS=Homo sapiens GN=RCE1 PE=1 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.798e-52 Identity = 120/244 (49.18%), Postives = 151/244 (61.89%), Query Frame = -2 Query: 2225 GRLLKNIMAGFAIISCLVLAVSYVGSLYLTKSTLPRDHPKTIKERILRVSIVCILGPIFVYFVMEEGKRNIFWMLLGLHGNRXX---XXXXXXXXXXXXXXAGPLVLYFV------LEGFQGVKADIFSTEYYTDLKWYRTLVVAPVSEELIFRACMLPLLVPDYGNSAGIFIAPLFFGVAHFHHIREKLKAGNELV-PVLLSSFFQFSYTTLFGAYSAFLFLRTGHLIGPVICHAFCNMMEFP 2926 G L + ++ SCL LA SYVGSLY+ KS LPRDHP IK R V +V L P+ V E LL L G R+ AA+ PL+LT+ILF GPL+ + +G + V A TD++W R V+AP++EEL+FRACMLP+L P G +F PLFFGVAHFHHI E+L+ V + LS+ FQFSYT +FGAY+AFLF+RTGHLIGPV+CH+FCN M FP Sbjct: 27 GGLGPGLCCWVSVFSCLSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQPGTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCMGLGPAVFTCPLFFGVAHFHHIIEQLRFRQSSVGNIFLSAAFQFSYTAVFGAYTAFLFIRTGHLIGPVLCHSFCNYMGFP 270 The following BLAST results are available for this feature:
BLAST of TCONS_00008981 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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