TCONS_00012865 (transcript) - C. hemisphaerica

Overview
NameTCONS_00012865
Unique NameTCONS_00012865
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length961

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00012865 ID=TCONS_00012865|Name=TCONS_00012865|organism=Clytia hemisphaerica|type=transcript|length=961bp
AAATATGTCGGATTAACTGCCAGGGtaattttcggaaattttttaggttt
aatttttattatttgttgCTATTTCCCATGTGTACATCGATTGTGTGTTA
AGgtaagaaacaaaaaaatcatggtgaagccttaaaaacaaattaaaaat
ataaCTTTAATAAAACACAACTTCCACAATGTATGACCGTGCACCTCGTC
TTATCTCCCTGGGAACATCTAGCACCACTGATGAAGTTGGCCCTGGTAAA
TATGATCCTGATCTCACCAATAGAAGAAAGCAAGATGGATATGCGCCTTT
CCTCTCTATGTCAATGCGAAACTCCTTCCTAGCCGTCAAAAGTGATATTG
CAGCTGTACCTGGACCTGGAGCCTATAATCCACGAATATACGAAACTATT
TCTGGGGGATCCGCATTAGCCAATCAAAGCATGCGTTTTCACGATAAACC
ACGTGACACGCCAGGCCCTGGAACCTACAATTTATCTAAACcgtctgatt
ggttgaaagagcAAAAATATAGATGCGAGGATGGTGTTCAGTCTTTTAAA
AAGgatAACAAAACTAGTCAAGTAAACATCCACTATCAACGCAAATCTGC
TCCTCCGTCCATCCCATCACCTGGTCAAGCTTACGGTTACGAAGAAAATA
AAGATGGCCGCctacaaaaacaaaagatcCCAGCCAAAGATTGTTCTCTC
GGACCAGCATATTATAAAATCAACTATGACGATACAAAGGCTGTACAGAA
ATACAAGGGAATTCACTTCGGAAACATGACATCCAAGCGAACCAGTATCA
AAAAAGTGGAAGACCTACCAGGTCCTGGAGCATATGATCCATATAAGCCA
AAGCCTAAAGCTCCTATCGATCTTATCATGGAAGAACAGCAGAAAAATAC
GGTAGCTGCGCAGTTACCAAGATATCATGAAATTGTCACTAAACAAGAAA
CAAAGAAGGTA
Run BLAST on NCBI

protein sequence of TCONS_00012865-protein

>TCONS_00012865-protein ID=TCONS_00012865-protein|Name=TCONS_00012865-protein|organism=Clytia hemisphaerica|type=polypeptide|length=261bp
MYDRAPRLISLGTSSTTDEVGPGKYDPDLTNRRKQDGYAPFLSMSMRNSF
LAVKSDIAAVPGPGAYNPRIYETISGGSALANQSMRFHDKPRDTPGPGTY
NLSKPSDWLKEQKYRCEDGVQSFKKDNKTSQVNIHYQRKSAPPSIPSPGQ
AYGYEENKDGRLQKQKIPAKDCSLGPAYYKINYDDTKAVQKYKGIHFGNM
TSKRTSIKKVEDLPGPGAYDPYKPKPKAPIDLIMEEQQKNTVAAQLPRYH
EIVTKQETKKV
Run BLAST on NCBI

transcript from alignment at sc0000157:33570..48949+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00012865 ID=TCONS_00012865|Name=TCONS_00012865|organism=Clytia hemisphaerica|type=transcript|length=15380bp|location=Sequence derived from alignment at sc0000157:33570..48949+ (Clytia hemisphaerica)
AAATATGTCGGATTAACTGCCAGGGtaattttcggaaattttttaggttt aatttttattatttgttgCTATTTCCCATGTGTACATCGATTGTGTGTTA AGGTATGCAATTTCatattcaaataatttttctgaGCAACGATTGGTCCT TGTTTGGATCAATTTTTAAATCATACCAATTCAATTGTAGGTTTGTGAAG GGGGGAGTTTTCAGATTTAGAAGAGACATATCTAATACTTTTTACTGTGA CATACGTGAAgtagggtaacttgcatcagtggagcgaaacttgcatagcc ctcaaattaaAGACCTGGCttgtcattaaaataaaaatttaaatcaaaac aaaatggtaaagaagagctgcgagcggagctgtaGACCAGACCcctgcgc tcgataggatcgatcatcggaacggctcgatgacggatcgatatgtgatc gatggattacttatcgatccggataggagatcNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttttttaagct tatgattagttatcgatctatcatcgatctatcatcgatctatcatcgat ctatcatcgatcttttatcgatcttatcgaccctatcgactatcgatgca taatcgatttataatcgatgacgaatcgattaacaatcgatgacgaatcg attaacaatcgatgacgaatcgattaactatcgatgacgaatcgattaac gatcgatgacgaatcgattaacgatcgatgacgaatcgattaactaacga tcgatgacgaatcgattaacgatcgatgacgaatcgattaacgatcgatg acgaatcgattaacgatcgatgacgaatcgattaacgatcgatgacgaat cgattaacgatcgatgacgaatcgatatactcgattgaaatacNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNataatggatcaacgaaggatcgatactcaagacttttt aatggctgaatcttccatcgatctcctatccggatcgataagtaaNNctt ccgatgatcgatcctatcgagcgcgggggtctggtgTAGAGTCAGTTcgc cagtgcacgaacggccccagtgcacgaacgagcgtctttgaacttgaaaa aaacaaccaaaaacaaacttctataaaattttttttgtgcagcagaatcc tcaaactattccttgcaatctctccaaaaattaaaataaacggagcacta gaacaacaccaaacctattttgaacgaggccaagtaaaaaaatcacgaaa ttcgggatttttgtaaatatggcTGATCgtgagagaaaatgttttttaga agaaaatttgcgcaagaagagttctgaaaatgactttcctcttttaaaaa ccttttatcttccatcacacaaaatttcattgaaacatgttagctcattg attcaaaatcaatagaaacatatcaccagtagttgatataaaaaaggttc cAATCCGCGAACAATCCgaacaccatattcaaaatgaagatattgcaacg tcaaaacattcgaaagcgctggcgatctcaattaaaaaagaagacactac attgccgcgcttttcgatgagcaaaacttgaaaaggaaaacaaacaaaaa aatggacgacaagaaaatatttacaaaaataaacaggttagtgtaaaaca ctaaagttcttataaaaaagacgctttttcagtgaaaaagcgcgtggttt tgaaaagttcaaatacccctgtatcatctcgGAAGAGAGTTAAAGCGAGC AgagctctaattttttctttcaaaagatcgttcGCGAACTGGTTTCTCGT TCGCGGACTGGGTTCGAATAGCGCTCGCTTTAACGATTTATTATCCCAAG aagaagctttcaaataaagtgaaaacaaactgaaagaaggacttcaagct tgtttacgagatggtcaaaaaggatttatgtaaaaaccagaagtaagtga gaaaagtgaaaaataagtttgccgttcgtgcactgTGCACCCCCCTCTAT TTGTTNGAAGTAAgtgagaaaagtgaaaaataagtttgccgttcgtgcac tgTGCACCCCCCTctatttgttttgaatttctgcTGCCTGCTTTGTTtgg ttggtcagtcatttgatagGCTATGCTATGGCAAGTTTCCTTCCGCTCAT GCAAGTTACCCCACTTCACGGTATAGAATATCAATatgataaaattcaaa aatgtctGACAGTTTTCTACAACAGCACAGGCCACAGCAGCATTCTGTAC TAGACAACCACATGAAGTATTTCACACAGCGCAGCAGGGAAATCTATCTg tctgtatgtctgtctgAGTTGAGGATTTATCCTTTTAATAGCATGCTTAG CCTACGTGTCGTGTGGCCCTTATATAGAGACCGATTCCGTGTGATgtcat tttcacccacgatcagccatttttctaagaaattgcaGAAAGTATATATG TGTGTACAGGATATTTAACACGTTGCTTAGCTCcaagcagttacatcaat atgccttcttacctgtctttaaaaatataaataaaagtaatcacggaaaa ggacgcaaaaaaaaaagacataagtgtgagatcaaagtaatcaaactcgt tagaaaaagtaccattagaagtcataaaaaaNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNtatttaggaggctgagttttaaacaaattgtcaagttgaaacg aacgataaatgtatcaaggtctgttttatttaccccctggtgacttaaca aaagagacttgtAAAGGCAGGCCACTGctaacaaaacctttaatccaAAC TTGGTGAAACGAGAATCGACTCAATTGAATAAACATAAAACATTATATTT TCCAACAGGTGAAAAACTGTGATTTCACCACGTACGCTCTCTGAGCATAG CTCACACAATATTGCTCTTACAAAGTCTcttatttatacaaaaaatcTAT AAATTTCTAAATGCAATTTAAATCCCAAAGGAAAATACTAAAACTAAAAC GTGTAATTACAGAACATAAAGGCGATAAAAGACAATTAACTATATacaat aaaaatgataattctCACGAGNAAGGCGATAAAAGACAATTAACTATATa caataaaaatgataattctCACGAGACACAtttgaaaatatacaaattaA TTACTGCACTGCGGCAGTAACAAGACTTAacttcagttaggaacatttgg cgagttcctgtacgccgCCGCaaccaaaaaaatcataacatcactcatta aaaaatggcgttcgtgtctttttcgcattttttttagcctagacgatgta agcaaacatagtaagtataagcacactgtgcttttaattggctgagattt ttttttgcgtcagaaaaactttttcaaactttcagcaatgattgaccaaa ctgttacaatgaaaattatccagcgcattttttatcttcttaccttcttc attttcaatgaagcactcaaagtttactgaaggtaaGTACATAAAATATT CTtgtaattaatgatattcattgaaacacgcttcgttgtgcgctgcggtg gagtgcatgacgtaactcgcgcggcaattaacttgccttctgttggaaga tcatattgggcgttttgtcGTTACCACCCTCATAGCAGCGGGCGCCTTTG TCTTTCcccaactctttccaccattttagatggccttaacaatagatcca aaagggcgccataatcttggaagataatttgttttggtctccggctttgg gaagtagcaatgtttttggttgttttcgatggaaaatgtaagaaacttaa gttacaagtgtcatttagtttttgctggcttatagaatggcaggatcctg gatggtttccctaactgaacttgatgttacaatccaattattgaaagttt gtctcaacctttttataatgagcgagacatacgttctctgattacgcaat tttcatattgacattttcaagGCACTTTGATGTAACTTTAAGCGCTTTCT TGTTTGACCTGGCAGCTGCGCATATAgctttctgtttgtttttttatttt gtggatGAAACttagtcagttaggaacatGCAACTTGCTTTGAGATTTGG TTGAAGATAGAGTGCCTACTGTAACTGGATCTTGCTGAATCAGTCTTATA CAAAtgcaaaaatctatttttcctCGTTTGACCACCACAGTTTTTCCTGT TTGAAGAAAAACTGCACCTATTACACCTTGGTTTCCCCCTGCAGGGCGAA AAAATAAAGCGTACTACAGCAAAATAACAATATAGAAATTTGAGTGACAA GGATTGGCAGGtccaaaaatgcataaaacataatgcatatatAACATGAT TATACATTATAtagttgaaaaatttgaattttagagGGGCTATAATAGGG AGAATTAGAGAGATAATGCTGTCAATAAAACAAATGTACCATTTTCTACT GGAAAATGGGTGCTTTTGTGGATGCTTTTTGTTTATTATTTGATAGCTGA CATAAATGAAAGAGGTTAATGCTATCTTTTTAATCTTCTTTTTATTTAAT CTGAGGGAAAACACTTTCCTTTTGTTTTTCATTCGGATTTGAAAAGTAAA AACTTTAAATGGTAATCACAAGAAGGATCACCTGTGAGAAGAGGAGAGAA ATCTTTCTCTGATTGGAATGTTTATTTATTCATACCTATATACTAGAAAC TTTTAAAACAGGTTTTTGCTTCTTTAAAGGGGGAGTGTTGGAAAAAATAA AATCTTTCTGTAAATTGATTTCACTATACTATTATTATGCATTATTATCT GATGTGCGTAAATAGCGACATTTGATTGGCTTCTTTGCTGTCCAATATTT TTTACATAGCTTCCATGGAGACTACATATTTCAAAAATTGATATCAAACA ACGAGTTCAATGACAATTGAGCATCTCTTTTTGACGTTACGTCACAAAAT AAAAATAAGACTTTTGAAAAAAACTTCCAAGAAACCAGATTTATGACGTT ATAAATTGGAATTTGAATATTTTTGTTTGCATATTGGATCCGACTTTGTG CAATAACTGCTTAGTATGTTTTGTGTTTTATGCATTTTTAGACCTGCAGG TTTCTAAGTCATTTTAGTTTTGGTTTGATTGCTGCCAGACAAAAGAGAGG CTTGTAAAAGATAAAAGACTATTTTAtagtctgaattgcagacctctatA CTATGGACATAATTCCCAAAAGAAACTCTTATTATctatttttgaagctt ttttaatCAATGCAATGCAATGGTGTAATTGcctatttctaattttgaaa aaatcagatTGTCGCTGAAAACTTGCCAGACTTAAGCTCTCCCACATTTT AGTGAGGTGAAATTGGCTGCTAGGTATTACAAGGCATTATTCCATGATGA TGTAcatatatttttcttgttaACTGGCTTCTAAGTAGGGTGTTCGGGTC CCCTTTTTCTCAAAGGAAGAGAGTATATCTGGCACTATAGAGGGATTGGT GGTCCCTTTTTTCCTCAATAAAAGCATACCAGTTACTTTAAAAGGGGTCA AATTCTCTTAAATAAAGTTTGTATCTTATTAAGTTTGCTTACAGGTAAGT GTCTTTTGGCAGTAATGCCTTGACTACAATCagtgtcataatatattggc acttttggctgatttaccatttttcgaaaattgaagttcgagtgagaatg taaatttttaggccttcaacttgatttcaacgattatttcgatctgggag ggatttattggtttctaggctatatttcaagccctactggaccatttttg aacttttggattaagtctagcgttaaaactcagagttaaaactctaccct tcgaaacctactttagagcactttcaaatcgattgtggtttcaaaacacc ccgatgaatttcccttttgtgccaagtattttgtcactgattgtctgaag aaaattggagttgccACTGTGAACAGAGTGAAGACAGCATCAGAAAcaga aacaacaaaaagaatCTTGCTAACATAAAAATGActtaaaagtttttgac ttttgcctTGAAGGAAAGGAGGAagcagggtgtctacgggaccttgaaaa ccttgaaaaccttgaaaaccttgaaaatgaaccagccaaccttgaaaacc ttgaaaactatcaattttctgggaaaaaccttgaaaaccttgaaaaatcg ttaaaaaccttgaaaagcaccctccagtcattcgaaaagtaagaataagt aaaaaaccgcctagagaattccatatttccctgtttctgttgcgattctg ttgcaacgaatgcaacatattcttttatcattagctgagtttttgtcact aattttccATCTGCATGAGCCCTAAGAAATCGACTgttccccaattttca aatcacttcagggcgtcttggaataatggccgttcatcaataaaatttcg aggatttcttaaaacaactcttttggcaattgattttgtaaaaaacaaaa tcaaaaacaaggcgttttttagccatttgaaagagtcaaaatcaaaattt tctctcttcggcgcaaaccatggttgggccTCCTCGGTCGCAATTGGTTt tgcttctaattctttatttctacagttgGAAGACTAGGGAGCTGGAGTAT TTCTTTTTGTGGTATTCTTCTCGAGAGGGAGATAGGAATTTAANNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTTAACCTCATGAATTCCACCTTTCTTGTG GGAAATCTCTAACCTTTTTTAGACAAGCTTGATATTTGAAGCCTTTTTGA TAACTGCCTAACAATTTTTTCCCCAATAATACAATGAGGGTCTCTATATT TTGAGGTTAACAAGAGTATATAAATTGTCAAATTAACCTCAAATAAGAaa cctttttcaagttttttttttcatttttgggtaTAAGCCATCAGTTATGA CCAAccctcaaaatttcaacctttttagataaaaaatgaagattttatgG CCAATAATgtaaattttccactttttcctcaaaaaaattaactaTTTCTT AGGCGAAATTGACTTGAGATTGTCCTTTTGCAACATGCAGCATTGCAGTA AAAGCCACAGTAAAGGTTATCCTTTGTTTGCCAaggtaaattattttctt tggaTGTGCCATAGTAGCTCATTTTAGATGAATTCTAGAATTGTGAAAct ttgattaatacttttttatgtttttatatattcATGTGTCATCTTGTTGA CTGTAATAGTTCATTGTTTgacaatttcaatttcttgttCTAATGTTCTC TCTGAAATGCAAAGTAAACattgaagtgaatacagtcgctctcatttCTC CCAATTCACCGTCTCTGAGAAGTCAGTAGACAATAATTCGNCATCTTTCC AGGTCTTCATCAAATCTATGCAGAGACTACCAATTACAATTTATAATGAG AATGTTCAACAGTTGAGATATGAGGTAGTTGAAAAAACATATCCTCCTGG TACTGTTATTATTAAGGAAGGTGATAAACCTTTGGGCATTTTTGTTGTTA TCAAAGGTATTTTCAATGTTATTGGAAGTGATGGTAAAACTGTTATTCGG CAGTTGAAACGTGGAGATTTCTTTGGTGAATTATCTAGTCTTTATGGTAA GCCATGTACATGCACTGTTTCTGTTGATAATCAGAGTGAATGTCATTTTG CAATGTTACCACATTCAAATGTGAAAAAGATTCTTCTTGATAATGAACCT TCAATAGATGTCAAGTCTTATTTCATCAAACAAGGATATCTTGATTCATC AAATCTTTTTCTATCGATCGATATACCAAGAGCTATATTACAGAGTCGTT TACATGAATGCCCATTGTTTTATGAATGGTCCAAAGAGGCTGTAATGGAA TTGACAAACCAACTATCAAAACAATTCATTGAGGTTCATCCAACCAATAC ACTGCTCACATTTGAGAATGAATCAAACAGTTCTTTGTTTTTGATCTTGG AAGGAACAGTTGAACTGTTGAGAAAGGTTGCATTTGCAGAAGTGGAGTGC AGTGGTTCTTGTACTGCTTTTTGTGAGGAAAATTTATTGGGTAATACCAA CAATATGCTGTATTCTTCTAAAGTGAAACAAACATGTCATTGCGTCACAC TTCATCAATGGCATTTTGAAGCATTGCTGAAAAACTATCCTATTGAATGT GCTAAATTTATGGAATGGAAAAAGATCTGGCAAGTCTTTTTGGAATCGAC AGCTGAATTAAACAATGAGCAGTTAGCATATTTGCATCCAAGCCATGTGC TCAACCTTATcaaagaacaaaagaattttattGATTTACCACGTGTTTTT CTTTACGAAATGGTTCTGAAAATGGATTATACAGTTGCTGAAACTAATGA AGTCATTTTTGAGATTGACTCCAGTTACCAGCATGACCCTTTCACATTCA TTGTTTTGAAAGGTGAGCTAGCAGTTGAAGCACCATCCAACTCTGACATT ATTGTGAAAACAAATGAGACTTTCTACTTGAATCCCAAATttccattaaa aacaaaattaaaagcaTTATCACCATTAATTGTCAGTGTTTTCAATACTT CGACCATTAAATTGTTGGAATTCAAATATGATGTGCAATCTGGATTTTGA AATACCTTCCAAATATACCAGGTAAAAGGGAAGGTCGTTTGGTTTGTTGG TTGTGTATATCAaggtttttcagtttttaaacaAAGACCATGATGATCCA CCAAAATTATCtaaaattcttaaatttttccaaCATTCATATAAattgaa gataatttttttgtccTATTCTTGATCAATCAaagttgtttcattttttt gtatcGTAAAAGTTTTAAGAATTATTAGATCACCAAAAGCAGCAAAGAGG TCAAATATAAGGGAAATATCATCCTTGAAGTACTTTTGGCAACTTTTTTC CAGACCATTAAAATTTCTTCCATATGGTTTTTTTTAGTCTAATGGTTTAT CAATTGTAAAATactgatttaaaaaatattgtatATAGCAAAGATTATGT AATTTTATGAAAGAAGTACTTGAAATCATTCAGTTTACTGACTTCTTTCA TCAGCTATAGCAAATTCTCTGCCTTCTCTTTTATATTCgggcaaaaattt tctttaaacagttttaatgaatttcttgtAATGAGAACTAGAATTTAATT CAGAAACATTTCTTTCGTTTTAggtaagaaacaaaaaaatcatggtgaag ccttaaaaacaaattaaaaatataaCTTTAATAAAACACAACTTCCACAA TGTATGACCGTGCACCTCGTCTTATCTCCCTGGGAACATCTAGCACCACT GATGAAGTTGGCCCTGGTAAATATGATCCTGATCTCACCAATAGAAGAAA GCAAGGTAACAAAAATTCCATTATAATCTTTATACAGAAATTGATCATAA ATCTTTTACATTGAATTATTGAAAGTAAAGGAATGAATATTGTTTTGATA ACTGATTCAAAAGCTAAGATTATCATGCTTTTTTAAGACTTCTCCACGAA TACGTTTACCATTTTGAGATTTTCTATTTCAGAGCTCGGTGCTCGTCACT TTGAAGAATGGAGATTAGAGTTTAGATTACAAAGTGCATTTTCTCCAATG TTTTCAGCCAGCTACAGTTCCTAAAATTGCAATGCAAGTTTTGCATGTGC CTTGGTGTTTTGTGAAGTTCTTTTAGCATTAAGGGCTCTCTGGCCCTCTT GGACTCTTTTTCCTCTGCTTTAAAAGAGTCTTATGATCAAGTCGAAAAGC CTGGAAAGAACATCTGAATACTATTATTTGAAGACAACTGTTTCCAAAGC TCAGATGATCAAGCTTTTTAGAATATGGTCTACAAATTAAAGTATAGATT GAAAATGATGTCTTGTTGTTATACTGTTTAGATGGATATGCGCCTTTCCT CTCTATGTCAATGCGAAACTCCTTCCTAGCCGTCAAAAGTGATATTGCAG CTGTACCTGGACCTGGAGCCTATAATCCACGAATATACGAAACTATTTCT GGGGGATCCGCATTAGCCAATCAAAGCATGCGTTTTCACGATAAACCACG TGACACGCCAGGCCCTGGAACCTACAATTTATCTAAACcgtctgattggt tgaaagagcAAAAATATAGATGCGAGGATGGTGTTCAGTCTTTTAAAAAG GTATACTAAAATGTATCCACTTTGATTTCGTATCCAAGAATtttactttt ctctttttttattctATTGAAAACCTGTCTCCCTAGTTGATACACATACA TTTCCAGGTTGTAAGCCTACagtttcaaacatttttaagctCTGAGATAT GACATAGTCTAGTCTTCTAAAGAAGCTACCtaacataaatttttttgaaa tgtaaaTGTGGAGATGTTGCTGTTTTGGTACTTTACACTTAAATTCAAAT CacactttgaaaatttgacctATCTTTATCATTtaacattattttttatt ttaggatAACAAAACTAGTCAAGTAAACATCCACTATCAACGCAAATCTG CTCCTCCGTCCATCCCATCACCTGGTCAAGCTTACGGTTACGAAGAAAAT AAAGATGGCCGCctacaaaaacaaaagatcCCAGCCAAAGATTGTTCTCT CGGACCAGCATATTATAAAATCAACTATGTAAGCAGCGTCGTTAAAGGAC TACGCTTAACGTATTTGCTTGCAcagtattttaaaaattaaagaaaaata gattcttttcttttcacaCCTTCCAAGCACAGATTTTAAGAAATTCTATT CTTTAtcctgctttgtcagcatagtgACACTTTCTATGACATGagaaaga atatctttaaatgTATAGAATCTTTGTTCGAAATATCAAGTGAGCCTCAA GAAAGTATAAGTGTTttatcatagtataagaaagctaTAGCTGGACagct tatgatttttttaatcgacCAGTGGCAGCTTTTCAGTCGCGgcgctttct tatactatggtttgaTTGCTCCATTATAGTGCTCtacaaagccttagaat gttctttaATTTCTTAGCCTCGAAGCCTTAAACTCTTACATACCTTATCC TTATATGATTGTATTAGATATAGGATCTGTGTACTTTGTGTGAGAAGAAT TTAATTTCCATCTCTTTATATTACCTAGGACGATACAAAGGCTGTACAGA AATACAAGGGAATTCACTTCGGAAACATGACATCCAAGCGAACCAGTATC AAAAAAGGTTAGCATTTTAAAATTTGTCCGACGAGTAAAGCTTTTTTCAG TCTAGGCATAACTGTTTGCCCGttttaaacacccctgtatcagtgataCG TCATATCAGCACCGGTGGACAACCCAGTGAAAAATCTCACCAGACTGATA TCTTTTCTACCACTAATAAAATGAACGATTCATTTCGGACGTTTGCGTtc gcgacgacgggaaccgacGTTTAATCTACTCTaatcaacttttttattct tattCGTAGTGGAAGACCTACCAGGTCCTGGAGCATATGATCCATATAAG CCAAAGCCTAAAGCTCCTATCGATCTTGTAAGTATGACCTATATTGTAAT TGTTTATACTGNAAAGCCCCTATCGATCTTGTAAGTATGACCTTATTGTA ACCGTTTCAACCACCCTCCTTTCTTTACATGAAgtatttgtaaatatttt tactttctttctCGATGCTCGTTTTCCTGATTTTAGGATGGTTTAGTTTG CCGAATATGGGTCTACGAATGAAATGTTTGACCGGAGAATCCttactttt ttcattttgttgggTCAAATTAAGGGTAAGACCTCTTTCATTAACTTCTT TTGATATGTTCAATTCGTATTTTGTAGATCATGGAAGAACAGCAGAAAAA TACGGTAGCTGCGCAGGTATGctcattttgttttcattttttacacaTCA CTACCCACTGTGTCGTTGTAACACGGTAAGGAATATTTAGTCAGTGGGTA TAAGATTAAGGGGTAAATGCCAATGGAGACTGAGAATGTCTTGTGTTTAG GTGGTgagaattttgaagttttttattattatatactATTACAGCCTTAA TATCCTAATTCTAGTGTTATTGTTTGCGGAGAGAGACTTCAGTTTTGTTC TCTAAAATAGGGGTGAAATTTCAAGGTACTTTTCTTGTACGATTCTTTGG ATAACTTTTTCTGGTGGCTAGACTNTAATCAACATCAATTTTAATTGAtg atttatattgaaatctTATTCCAGAGATTTTCAAACGCCTACGATTCCAC ACCTTCACCTGGGATGTATAATGATCCACGCCGCGCCCTTGAAATCTGTA ACAGGTAGGTACTGTTTGGTTTTTATGCTCCTTCGAAGCTAGGTTAAGAC TTTCCAcattacaaaatttttgaatacttcggatatttttaatttctttt gaaatgctcctaatttcaccattttgtaagtatttttatgCAATTCCTTA AGACATTGGATGTTTTAGTGCCCTTAAgcctttaaaatattcttaacttg atCTTAGTATTTCAGCCATTTTAGCCTGATGATCATAGATANTAAATATC GCTGTAACAACAAATTTACGTAATATATATAAACATGTGTATACGTAATT GAAAAAGGACGCAAAATTAGGGCTATTAGCCAATAAGATAATGAGAAATT TTAACTAATCTGAGAAAACCTTTTTCATTTAGTTACCAAGATATCATGAA ATTGTCACTAAACAAGAAACAAAGAAGGTA

Coding sequence (CDS) from alignment at sc0000157:33570..48949+

>TCONS_00012865 ID=TCONS_00012865|Name=TCONS_00012865|organism=Clytia hemisphaerica|type=CDS|length=5481bp|location=Sequence derived from alignment at sc0000157:33570..48949+ (Clytia hemisphaerica)
ATGTATGACCGTGCACCTCGTCTTATCTCCCTGGGAACATCTAGCACCAC
TGATGAAGTTGGCCCTGGTAAATATGATCCTGATCTCACCAATAGAAGAA
AGCAAGATGGATATGCGCCTTTCCTCTCTATGTCAATGCGAAACTCCTTC
CTAGCCGTCAAAAGTGATATTGCAGCTGTACCTGGACCTGGAGCCTATAA
TCCACGAATATACGAAACTATTTCTGGGGGATCCGCATTAGCCAATCAAA
GCATGCGTTTTCACGATAAACCACGTGACACGCCAGGCCCTGGAACCTAC
AATTTATCTAAACcgtctgattggttgaaagagcAAAAATATAGATGCGA
GGATGGTGTTCAGTCTTTTAAAAAGgatAACAAAACTAGTCAAGTAAACA
TCCACTATCAACGCAAATCTGCTCCTCCGTCCATCCCATCACCTGGTCAA
GCTTACGGTTACGAAGAAAATAAAGATGGCCGCctacaaaaacaaaagat
cCCAGCCAAAGATTGTTCTCTCGGACCAGCATATTATAAAATCAACTATG
ACGATACAAAGGCTGTACAGAAATACAAGGGAATTCACTTCGGAAACATG
ACATCCAAGCGAACCAGTATCAAAAAAGTGGAAGACCTACCAGGTCCTGG
AGCATATGATCCATATAAGCCAAAGCCTAAAGCTCCTATCGATCTTATCA
TGGAAGAACAGCAGAAAAATACGGTAGCTGCGCAGTTACCAAGATATCAT
GAAATTGTCACTAAACAAGAAACAAAGAAGGTAATGTATGACCGTGCACC
TCGTCTTATCTCCCTGGGAACATCTAGCACCACTGATGAAGTTGGCCCTG
GTAAATATGATCCTGATCTCACCAATAGAAGAAAGCAAGATGGATATGCG
CCTTTCCTCTCTATGTCAATGCGAAACTCCTTCCTAGCCGTCAAAAGTGA
TATTGCAGCTGTACCTGGACCTGGAGCCTATAATCCACGAATATACGAAA
CTATTTCTGGGGGATCCGCATTAGCCAATCAAAGCATGCGTTTTCACGAT
AAACCACGTGACACGCCAGGCCCTGGAACCTACAATTTATCTAAACcgtc
tgattggttgaaagagcAAAAATATAGATGCGAGGATGGTGTTCAGTCTT
TTAAAAAGgatAACAAAACTAGTCAAGTAAACATCCACTATCAACGCAAA
TCTGCTCCTCCGTCCATCCCATCACCTGGTCAAGCTTACGGTTACGAAGA
AAATAAAGATGGCCGCctacaaaaacaaaagatcCCAGCCAAAGATTGTT
CTCTCGGACCAGCATATTATAAAATCAACTATGACGATACAAAGGCTGTA
CAGAAATACAAGGGAATTCACTTCGGAAACATGACATCCAAGCGAACCAG
TATCAAAAAAGTGGAAGACCTACCAGGTCCTGGAGCATATGATCCATATA
AGCCAAAGCCTAAAGCTCCTATCGATCTTATCATGGAAGAACAGCAGAAA
AATACGGTAGCTGCGCAGTTACCAAGATATCATGAAATTGTCACTAAACA
AGAAACAAAGAAGGTAATGTATGACCGTGCACCTCGTCTTATCTCCCTGG
GAACATCTAGCACCACTGATGAAGTTGGCCCTGGTAAATATGATCCTGAT
CTCACCAATAGAAGAAAGCAAGATGGATATGCGCCTTTCCTCTCTATGTC
AATGCGAAACTCCTTCCTAGCCGTCAAAAGTGATATTGCAGCTGTACCTG
GACCTGGAGCCTATAATCCACGAATATACGAAACTATTTCTGGGGGATCC
GCATTAGCCAATCAAAGCATGCGTTTTCACGATAAACCACGTGACACGCC
AGGCCCTGGAACCTACAATTTATCTAAACcgtctgattggttgaaagagc
AAAAATATAGATGCGAGGATGGTGTTCAGTCTTTTAAAAAGgatAACAAA
ACTAGTCAAGTAAACATCCACTATCAACGCAAATCTGCTCCTCCGTCCAT
CCCATCACCTGGTCAAGCTTACGGTTACGAAGAAAATAAAGATGGCCGCc
tacaaaaacaaaagatcCCAGCCAAAGATTGTTCTCTCGGACCAGCATAT
TATAAAATCAACTATGACGATACAAAGGCTGTACAGAAATACAAGGGAAT
TCACTTCGGAAACATGACATCCAAGCGAACCAGTATCAAAAAAGTGGAAG
ACCTACCAGGTCCTGGAGCATATGATCCATATAAGCCAAAGCCTAAAGCT
CCTATCGATCTTATCATGGAAGAACAGCAGAAAAATACGGTAGCTGCGCA
GTTACCAAGATATCATGAAATTGTCACTAAACAAGAAACAAAGAAGGTAA
TGTATGACCGTGCACCTCGTCTTATCTCCCTGGGAACATCTAGCACCACT
GATGAAGTTGGCCCTGGTAAATATGATCCTGATCTCACCAATAGAAGAAA
GCAAGATGGATATGCGCCTTTCCTCTCTATGTCAATGCGAAACTCCTTCC
TAGCCGTCAAAAGTGATATTGCAGCTGTACCTGGACCTGGAGCCTATAAT
CCACGAATATACGAAACTATTTCTGGGGGATCCGCATTAGCCAATCAAAG
CATGCGTTTTCACGATAAACCACGTGACACGCCAGGCCCTGGAACCTACA
ATTTATCTAAACcgtctgattggttgaaagagcAAAAATATAGATGCGAG
GATGGTGTTCAGTCTTTTAAAAAGgatAACAAAACTAGTCAAGTAAACAT
CCACTATCAACGCAAATCTGCTCCTCCGTCCATCCCATCACCTGGTCAAG
CTTACGGTTACGAAGAAAATAAAGATGGCCGCctacaaaaacaaaagatc
CCAGCCAAAGATTGTTCTCTCGGACCAGCATATTATAAAATCAACTATGA
CGATACAAAGGCTGTACAGAAATACAAGGGAATTCACTTCGGAAACATGA
CATCCAAGCGAACCAGTATCAAAAAAGTGGAAGACCTACCAGGTCCTGGA
GCATATGATCCATATAAGCCAAAGCCTAAAGCTCCTATCGATCTTATCAT
GGAAGAACAGCAGAAAAATACGGTAGCTGCGCAGTTACCAAGATATCATG
AAATTGTCACTAAACAAGAAACAAAGAAGGTAATGTATGACCGTGCACCT
CGTCTTATCTCCCTGGGAACATCTAGCACCACTGATGAAGTTGGCCCTGG
TAAATATGATCCTGATCTCACCAATAGAAGAAAGCAAGATGGATATGCGC
CTTTCCTCTCTATGTCAATGCGAAACTCCTTCCTAGCCGTCAAAAGTGAT
ATTGCAGCTGTACCTGGACCTGGAGCCTATAATCCACGAATATACGAAAC
TATTTCTGGGGGATCCGCATTAGCCAATCAAAGCATGCGTTTTCACGATA
AACCACGTGACACGCCAGGCCCTGGAACCTACAATTTATCTAAACcgtct
gattggttgaaagagcAAAAATATAGATGCGAGGATGGTGTTCAGTCTTT
TAAAAAGgatAACAAAACTAGTCAAGTAAACATCCACTATCAACGCAAAT
CTGCTCCTCCGTCCATCCCATCACCTGGTCAAGCTTACGGTTACGAAGAA
AATAAAGATGGCCGCctacaaaaacaaaagatcCCAGCCAAAGATTGTTC
TCTCGGACCAGCATATTATAAAATCAACTATGACGATACAAAGGCTGTAC
AGAAATACAAGGGAATTCACTTCGGAAACATGACATCCAAGCGAACCAGT
ATCAAAAAAGTGGAAGACCTACCAGGTCCTGGAGCATATGATCCATATAA
GCCAAAGCCTAAAGCTCCTATCGATCTTATCATGGAAGAACAGCAGAAAA
ATACGGTAGCTGCGCAGTTACCAAGATATCATGAAATTGTCACTAAACAA
GAAACAAAGAAGGTAATGTATGACCGTGCACCTCGTCTTATCTCCCTGGG
AACATCTAGCACCACTGATGAAGTTGGCCCTGGTAAATATGATCCTGATC
TCACCAATAGAAGAAAGCAAGATGGATATGCGCCTTTCCTCTCTATGTCA
ATGCGAAACTCCTTCCTAGCCGTCAAAAGTGATATTGCAGCTGTACCTGG
ACCTGGAGCCTATAATCCACGAATATACGAAACTATTTCTGGGGGATCCG
CATTAGCCAATCAAAGCATGCGTTTTCACGATAAACCACGTGACACGCCA
GGCCCTGGAACCTACAATTTATCTAAACcgtctgattggttgaaagagcA
AAAATATAGATGCGAGGATGGTGTTCAGTCTTTTAAAAAGgatAACAAAA
CTAGTCAAGTAAACATCCACTATCAACGCAAATCTGCTCCTCCGTCCATC
CCATCACCTGGTCAAGCTTACGGTTACGAAGAAAATAAAGATGGCCGCct
acaaaaacaaaagatcCCAGCCAAAGATTGTTCTCTCGGACCAGCATATT
ATAAAATCAACTATGACGATACAAAGGCTGTACAGAAATACAAGGGAATT
CACTTCGGAAACATGACATCCAAGCGAACCAGTATCAAAAAAGTGGAAGA
CCTACCAGGTCCTGGAGCATATGATCCATATAAGCCAAAGCCTAAAGCTC
CTATCGATCTTATCATGGAAGAACAGCAGAAAAATACGGTAGCTGCGCAG
TTACCAAGATATCATGAAATTGTCACTAAACAAGAAACAAAGAAGGTAAT
GTATGACCGTGCACCTCGTCTTATCTCCCTGGGAACATCTAGCACCACTG
ATGAAGTTGGCCCTGGTAAATATGATCCTGATCTCACCAATAGAAGAAAG
CAAGATGGATATGCGCCTTTCCTCTCTATGTCAATGCGAAACTCCTTCCT
AGCCGTCAAAAGTGATATTGCAGCTGTACCTGGACCTGGAGCCTATAATC
CACGAATATACGAAACTATTTCTGGGGGATCCGCATTAGCCAATCAAAGC
ATGCGTTTTCACGATAAACCACGTGACACGCCAGGCCCTGGAACCTACAA
TTTATCTAAACcgtctgattggttgaaagagcAAAAATATAGATGCGAGG
ATGGTGTTCAGTCTTTTAAAAAGgatAACAAAACTAGTCAAGTAAACATC
CACTATCAACGCAAATCTGCTCCTCCGTCCATCCCATCACCTGGTCAAGC
TTACGGTTACGAAGAAAATAAAGATGGCCGCctacaaaaacaaaagatcC
CAGCCAAAGATTGTTCTCTCGGACCAGCATATTATAAAATCAACTATGAC
GATACAAAGGCTGTACAGAAATACAAGGGAATTCACTTCGGAAACATGAC
ATCCAAGCGAACCAGTATCAAAAAAGTGGAAGACCTACCAGGTCCTGGAG
CATATGATCCATATAAGCCAAAGCCTAAAGCTCCTATCGATCTTATCATG
GAAGAACAGCAGAAAAATACGGTAGCTGCGCAGTTACCAAGATATCATGA
AATTGTCACTAAACAAGAAACAAAGAAGGTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007217XLOC_007217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012865-exon-sc0000157-1491911889:33570..33671TCONS_00012865-exon-sc0000157-1491911889:33570..33671Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:33570..33671TCONS_00012865-exon-sc0000157-1510915933:33570..33671Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:33570..33671TCONS_00012865-exon-sc0000157-1575043694:33570..33671Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:45393..45574TCONS_00012865-exon-sc0000157-1491911889:45393..45574Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:45393..45574TCONS_00012865-exon-sc0000157-1510915933:45393..45574Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:45393..45574TCONS_00012865-exon-sc0000157-1575043694:45393..45574Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:46101..46369TCONS_00012865-exon-sc0000157-1491911889:46101..46369Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:46101..46369TCONS_00012865-exon-sc0000157-1510915933:46101..46369Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:46101..46369TCONS_00012865-exon-sc0000157-1575043694:46101..46369Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:46674..46847TCONS_00012865-exon-sc0000157-1491911889:46674..46847Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:46674..46847TCONS_00012865-exon-sc0000157-1510915933:46674..46847Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:46674..46847TCONS_00012865-exon-sc0000157-1575043694:46674..46847Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:47348..47426TCONS_00012865-exon-sc0000157-1491911889:47348..47426Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:47348..47426TCONS_00012865-exon-sc0000157-1510915933:47348..47426Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:47348..47426TCONS_00012865-exon-sc0000157-1575043694:47348..47426Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:47679..47746TCONS_00012865-exon-sc0000157-1491911889:47679..47746Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:47679..47746TCONS_00012865-exon-sc0000157-1510915933:47679..47746Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:47679..47746TCONS_00012865-exon-sc0000157-1575043694:47679..47746Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:48047..48085TCONS_00012865-exon-sc0000157-1491911889:48047..48085Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:48047..48085TCONS_00012865-exon-sc0000157-1510915933:48047..48085Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:48047..48085TCONS_00012865-exon-sc0000157-1575043694:48047..48085Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1491911889:48902..48949TCONS_00012865-exon-sc0000157-1491911889:48902..48949Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1510915933:48902..48949TCONS_00012865-exon-sc0000157-1510915933:48902..48949Clytia hemisphaericaexon
TCONS_00012865-exon-sc0000157-1575043694:48902..48949TCONS_00012865-exon-sc0000157-1575043694:48902..48949Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00012865-proteinTCONS_00012865-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000157supercontigsc0000157:33570..48949 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.5923 37.2647 13.5145 8.88426 141.623 105.929 57.8038 56.6137 25.5233 43.2363 26.9578 27.3984 2.29048 1.56407 3.16112 4.8873 5.38327 5.59028 5.01511 3.72605 5.42809 7.74266 16.2821 14.9995 203.928 124.182 18.5014 19.6761 9.5302 10.9368
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt
Blast
BLAST of TCONS_00012865 vs. Swiss-Prot (Human)
Match: STPG2 (Sperm-tail PG-rich repeat-containing protein 2 OS=Homo sapiens GN=STPG2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.225e-26
Identity = 84/261 (32.18%), Postives = 116/261 (44.44%), Query Frame = 2
Query:  179 MYDRAPRLISLGTSSTTD-EVGPGKYDPDLTNRRKQDGYAPFLSMSMRNSFLAVKSDIAAVPGPGAYNPRIYETISGGSALANQSMRFHDKPRDTPGPGTYNLSKPSDWLKEQKYRCEDGVQSFKKDNKTSQVNIHYQRKSAPPSIPSPGQAYGYEENKDGRLQKQKIPAKDCSLGPAYYKINYDDTKAVQKYKGIHFGNMTSKRTSIKKVEDLXXXXXXXXXXXXXXXXIDLIMEEQQKNTVAAQLPRYHEIVTKQETKK 958
            MYDRAPRL+ L    +T+  VGPG Y      ++     APFLS++ R S   + S I                                  +  PGPG YN+S+       QK          +    T  V++        PSIPS G++YGY  N DG + K   PA D +LGPAYYK  +D + A  KYKGIHFGN + ++   KK    PG       K      +++  ++QQ     + +PR +EI+  QE KK
Sbjct:    1 MYDRAPRLLKLAEGGSTEAHVGPGSYQVPFLKQQATGSNAPFLSLTARESTFTIASSIE---------------------------------KAVPGPGHYNVSE------AQKIS--------RSPTLTRSVDV--------PSIPSCGKSYGYHINDDGSIIKCFPPACDSTLGPAYYKPQFDVSNATLKYKGIHFGNSSGRQELPKKSGPGPGQYDIVQKKTSYYENVNIKRDQQQ--NYCSFIPRLYEIIVLQEKKK 204          
The following BLAST results are available for this feature:
BLAST of TCONS_00012865 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
STPG25.225e-2632.18Sperm-tail PG-rich repeat-containing protein 2 OS=... [more]
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