TCONS_00017665 (transcript) - C. hemisphaerica

Overview
NameTCONS_00017665
Unique NameTCONS_00017665
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1001

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00017665 ID=TCONS_00017665|Name=TCONS_00017665|organism=Clytia hemisphaerica|type=transcript|length=1001bp
TGGGATCTACAACACAAACGATCATTGGAATCTATTGCTTATATTTCCAA
AACAAAAGCAACTTTGGTTGGCTAACCCACTTGGTGAAGGAACAATTGAA
CAACAAAATATTGTCAGGACATGGGAATCGATAATGGCTTTGAACTTTAA
AGAATCCACTCCTTGGACAATATATTCGCAGCAACATGCAATTCAAGAGG
ATGCTGTCTCGTGTGGTGTTTTCTGTCTGAAGTTTTTAGAATCATTCCTC
CAGAGTAGGACATTACCGTCAAATTTTGAGTTAAAAGACGTATTTGCGTA
CCGTCAAAGAATTGGGTCGCAACTTCTCCGCAGTGGAGGTTATGGAACTT
GGACCAAACGGATATGTAGGATTTGTGGTAGAAATGATCCACCAAGATGT
AATTTTTCAAGTGTTCCCAAACGTACGAAATGGATTGAATGTGAAAACTG
CAAGCCAAAAAGATGGTTCCACCTCTTATGCCTTGGATCGGACGAATCAT
CCAAGGATATGTCCTTCGATTGTGATAAGGAAATAAAAGTAGCAGTTAAG
CATTCGTTAAAACCCGGACAGCTTCTTTTGAAACGACGAATGAACAAAAA
GATCAAAGTTTGCGGGAAGAAAAGAAAAGGATGCACGAAAGGGCAGATCT
CCGACTTGCCTTTAACGTCACCACATAACCTAATCTTTATGAAGAAGGAG
CGCAGACCGAAACGGTCTAAACATTGGTCATCAGCCGACGAAAGCGACTT
TGTTTTGGCTGACGTTCATTATCATATCGAATGTGCCGAAAAATCGAATG
GTCCTATTGTGTTGGCGGAAAATGTAAATCCTCTTACAGAAGAAGAGATT
GTACTTCTCAAAGAGAAAGGATTTACTCTATAAAGCGATTAAGTAAATTT
CGGATGTTGGTTATTATCACATATTTATAAAGCCTGAATGGCTAGATGGC
GTGCTtaggctgaaaagtgtgccgtattTCGATAGGAAATCCTGACACGT
G
Run BLAST on NCBI

protein sequence of TCONS_00017665-protein

>TCONS_00017665-protein ID=TCONS_00017665-protein|Name=TCONS_00017665-protein|organism=Clytia hemisphaerica|type=polypeptide|length=293bp
GIYNTNDHWNLLLIFPKQKQLWLANPLGEGTIEQQNIVRTWESIMALNFK
ESTPWTIYSQQHAIQEDAVSCGVFCLKFLESFLQSRTLPSNFELKDVFAY
RQRIGSQLLRSGGYGTWTKRICRICGRNDPPRCNFSSVPKRTKWIECENC
KPKRWFHLLCLGSDESSKDMSFDCDKEIKVAVKHSLKPGQLLLKRRMNKK
IKVCGKKRKGCTKGQISDLPLTSPHNLIFMKKERRPKRSKHWSSADESDF
VLADVHYHIECAEKSNGPIVLAENVNPLTEEEIVLLKEKGFTL
Run BLAST on NCBI

transcript from alignment at sc0000273:63955..67886+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00017665 ID=TCONS_00017665|Name=TCONS_00017665|organism=Clytia hemisphaerica|type=transcript|length=3932bp|location=Sequence derived from alignment at sc0000273:63955..67886+ (Clytia hemisphaerica)
TGGGATCTACAACACAAACGATCATTGGAATCTATTGGtaagaatgaaat
ttttcattctATGGTGATGAAATGCTTGAGTTTACAAATGCTAACAATTT
GTTTccaataaaaaaatgattttgattttcgatttttgataatgaaatgt
ttttgaaaatctctATCTTTCTTTATCTTTGTAGCTTATATTTCCAAAAC
AAAAGCAACTTTGGTTGGCTAACCCACTTGGTGAAGGAACAATTGAACAA
CAAAATATTGTCAGGACATGGGAGTaggttttgtttataaatattaGACA
GTTTCTCAGTTAGTATTTTATGGTATGTGGTATTTAACAAGCTGTTCTGT
CTTTCGTAAGAGACTTTCTCTGATTATTGCCTACCTAAAAATGTTAAACA
TGCCTTTTTTCCTGTAAATATCATTTGCAAGTTCACTATCTTGTTACATT
GTTTATAGGCCTCAAAATGGAGAACGTGTTGACCATGAGAGTTGAGTTAT
GTTAACTTAGTCTGTTTCATTCTAAGAGAGATGGTGTATTCACTGAGCTT
TATAAAAATCCGTGCTGAAAATTTGTACCCAGCAAGCAAGTACTACTAAG
CACAAGAGNCcatattcttttttaattgtcaagaggaaaggcaaacttaa
accTTGGCGCATTAGCTCTTTAGAATTTGTACAGTAGttctcaagttata
agcttttgaagtcaaaattttttgaaaaagtccaaaaacacgtcacaaaa
ggggtatcaaatgaagcattttttaaaactgttcactaattttttttaga
tgcctcaaattattgattttctatttttcactgccttatcggggaaaact
tcgtcggggaaaagtgacgaaattttggataaatgacgaatattttcccc
gacgaagttttccctgaATTTTTCcggacgaagttttccccgataaggta
taactttttttaggataattgataaaaatcaGCTGAGATCATTAATTGAG
TCGTGAATAGTGAAAATGTGAGGCTTTCTGCATAGAATTGCGTTAAGTCT
GTTCTTAAAATGATAGTCCGCACATTTTGACTCCTTGCTCTGAGAAGAGA
CAAGATTTATCAAAAAGGAATACCTCGCCGGAAANTTGAAAATTTGTACC
CAGCAAGCAAGTACTACTAAGCACAAGAGCGTTTGGAGattgaaattttc
taattttttcctaGTGAGTAATAAAGAATGACTTTTTTTTAGATCGATAA
TGGCTTTGAACTTTAAAGAATCCACTCCTTGGACAATATATTCGCAGCAA
CATGCAATTCAAGAGGATGCTGTCTCGTGTGGTGTTTTCTGTCTGAAGGT
AATTGCTTGAGTGTTTGCATTTTTGTGCAAAGCCACCTAGCCAGCTCGAC
CTGGTTAAGCAAACGTCCATTTGTcgctttgaaatttttcttttgaaaaa
ttgaaagatggAAAAGAATAAAATTAAGATTCTTCGTTTAAATTATTCTC
CTTATTCtattgttattctgaaaatatctttccaacggtgtataactttc
TAGCATAGCATAAATGGGTCCcgagaaaatgctcaaaaaactaaattgtc
cacatacttttgagacagacttttttTCAATACACCACCTTTCTTGCTTG
AGTCCTCATAGGGACTTTCTTCATGATAATCTCGAAAGggcggggggtac
tagggttggcggttgaggggtatgtgcggacgagACCTCCAAAAACCAAA
CCTTAGAGTCCAAATTTTAGAGAAGAAGTCACCCTTAGATAGAATTTTAC
TATTTACtctcgaaattaaaaaaaaatccaaaaaatgttgaatttcCCAA
CCCTTGCaggaattgatttgaaattttctgatttttgtaacccttagaga
ggtCAGcgcatacccagcacccatttttgcctaagtacccccactCCGTG
ATGTTAATTTATCTTTCCAGTTTTTAGAATCATTCCTCCAGAGTAGGACA
TTACCGTCAAATTTTGAGTTAAAAGACGTATTTGCGTACCGTCAAAGAAT
TGGGTCGCAACTTCTCCGCAGTGGAGGTATGATTTTAGGCTCTTTTTTTC
CAAACAGTACTTCTATCCACCATTTTCAAGCTAACTTATATTCACACACA
GAGTTTTATTAAAACTCTGAAGGGTCTTTTAACCGTTTTTTTTATCGGGT
ACACTGACATTACATGATATGGGTCAGCTCGTCCACTAACACAAAAATGT
TTTAGAGGGAAGGTGTTATGTTTTTTCATTActgttgttttgatgtttct
tacCTAGTTTGTTCGGTTGATTCTAATAGGTTATGGAACTTGGACCAAAC
GGATATGTAGGATTTGTGGTAGAAATGATCCACCAAGATGTAATTTTTCA
AGTGTTCCCAAACGTACGAAATGGGTATGTTTATAACTTTTCACATTTCT
GTAACAGCTCGAACATCCATTATCCACGATATTCTTCATtgttcaaaaaa
atgtcagataTCTTTTAAAGCTCTTACCGGTGCCTCCTTTCGCAAGGGAG
GTCGAAGTCAAAAAATATCTCTTAGATCGATTCATCTATCAGTTTGAAAT
TCCAGCTCATACCAAATGGTATGGGTGTTATAACTCCTTTTTAAAATACA
CTGTCATGTATGATTTAAATCTTCTAGATAAGATATCTAAGgtgaatatt
tttaaacaatcaCTTTCAGATTGAATGTGAAAACTGCAAGCCAAAAAGAT
GGTTCCACCTCTTATGCCTTGGATCGGACGAATCATCCAAGGATATGTCC
TTCGATTGTGATAAGGTGATTTATGTCATTTAAAATTTGAAGCTCTACCT
AGATGTTTGTGAACCTCGAGCTCGAATCGGGAAATTTTTCGCGTCGTGCA
ATAATTGAGTTAAACCAGAAACATCANGTGAACCTCGAGCTCGAATCGGG
ATTTTTTTCGCGTCGTGTGATATTTGTGTTAATCCAGAAACATCACACTA
GCGTAGATTAAAGGGCGGAAAATTTGTGTagcagatttttatgatgacat
ttatttctttttacattatgaatagataattaccatctttatataaatca
aaaagaaatcgtGCTATTTTTATTGTGTTTTTTAGTCGATTCTCTCCTAG
ATGTAACCCTACCCTAACACATTATCGAATCTTTCTATCAgattatttct
aaaatttttcccattgctccgtcataaaaaaattattgtttctaATAATC
AGAGGCACTTGCTTTCAAGTGCTCTATCCCCGTTGGAGGGCGAGGATGGG
TTACCAGGGGAATTAAGCGTACGGTTATGTGCCGCTTAcagtgtcccaaa
aaaaaattgaacacaTCTGTTTTCAGGCAAACCCCAATAACCTCTCCTGG
GATGTATCGGCGGTGATGATAACTGTTTCTTTGCTATTatattttctcta
ttttccTTAGGAAATAAAAGTAGCAGTTAAGCATTCGTTAAAACCCGGAC
AGCTTCTTTTGAAACGACGAATGAACAAAAAGATCAAAGTTTGCGGGAAG
AAAAGAAAAGGATGCACGAAAGGGCAGATCTCCGACTTGCCTTTAACGTC
ACCACATAACCTAATCTTTATGAAGAAGGAGCGCAGACCGAAACGGTCTA
AACATTGGTCATCAGCCGACGAAAGCGACTTTGTTTTGGCTGACGTTCAT
TATCATATCGAATGTGCCGAAAAATCGAATGGTCCTATTGTGTTGGCGGA
AAATGTAAATCCTCTTACAGAAGAAGAGATTGTACTTCTCAAAGAGAAAG
GATTTACTCTATAAAGCGATTAAGTAAATTTCGGATGTTGGTTATTATCA
CATATTTATAAAGCCTGAATGGCTAGATGGCGTGCTtaggctgaaaagtg
tgccgtattTCGATAGGAAATCCTGACACGTG

Coding sequence (CDS) from alignment at sc0000273:63955..67886+

>TCONS_00017665 ID=TCONS_00017665|Name=TCONS_00017665|organism=Clytia hemisphaerica|type=CDS|length=6174bp|location=Sequence derived from alignment at sc0000273:63955..67886+ (Clytia hemisphaerica)
GGGATCTACAACACAAACGATCATTGGAATCTATTGCTTATATTTCCAAA
ACAAAAGCAACTTTGGTTGGCTAACCCACTTGGTGAAGGAACAATTGAAC
AACAAAATATTGTCAGGACATGGGAATCGATAATGGCTTTGAACTTTAAA
GAATCCACTCCTTGGACAATATATTCGCAGCAACATGCAATTCAAGAGGA
TGCTGTCTCGTGTGGTGTTTTCTGTCTGAAGTTTTTAGAATCATTCCTCC
AGAGTAGGACATTACCGTCAAATTTTGAGTTAAAAGACGTATTTGCGTAC
CGTCAAAGAATTGGGTCGCAACTTCTCCGCAGTGGAGGTTATGGAACTTG
GACCAAACGGATATGTAGGATTTGTGGTAGAAATGATCCACCAAGATGTA
ATTTTTCAAGTGTTCCCAAACGTACGAAATGGATTGAATGTGAAAACTGC
AAGCCAAAAAGATGGTTCCACCTCTTATGCCTTGGATCGGACGAATCATC
CAAGGATATGTCCTTCGATTGTGATAAGGAAATAAAAGTAGCAGTTAAGC
ATTCGTTAAAACCCGGACAGCTTCTTTTGAAACGACGAATGAACAAAAAG
ATCAAAGTTTGCGGGAAGAAAAGAAAAGGATGCACGAAAGGGCAGATCTC
CGACTTGCCTTTAACGTCACCACATAACCTAATCTTTATGAAGAAGGAGC
GCAGACCGAAACGGTCTAAACATTGGTCATCAGCCGACGAAAGCGACTTT
GTTTTGGCTGACGTTCATTATCATATCGAATGTGCCGAAAAATCGAATGG
TCCTATTGTGTTGGCGGAAAATGTAAATCCTCTTACAGAAGAAGAGATTG
TACTTCTCAAAGAGAAAGGATTTACTCTATAAGGGATCTACAACACAAAC
GATCATTGGAATCTATTGCTTATATTTCCAAAACAAAAGCAACTTTGGTT
GGCTAACCCACTTGGTGAAGGAACAATTGAACAACAAAATATTGTCAGGA
CATGGGAATCGATAATGGCTTTGAACTTTAAAGAATCCACTCCTTGGACA
ATATATTCGCAGCAACATGCAATTCAAGAGGATGCTGTCTCGTGTGGTGT
TTTCTGTCTGAAGTTTTTAGAATCATTCCTCCAGAGTAGGACATTACCGT
CAAATTTTGAGTTAAAAGACGTATTTGCGTACCGTCAAAGAATTGGGTCG
CAACTTCTCCGCAGTGGAGGTTATGGAACTTGGACCAAACGGATATGTAG
GATTTGTGGTAGAAATGATCCACCAAGATGTAATTTTTCAAGTGTTCCCA
AACGTACGAAATGGATTGAATGTGAAAACTGCAAGCCAAAAAGATGGTTC
CACCTCTTATGCCTTGGATCGGACGAATCATCCAAGGATATGTCCTTCGA
TTGTGATAAGGAAATAAAAGTAGCAGTTAAGCATTCGTTAAAACCCGGAC
AGCTTCTTTTGAAACGACGAATGAACAAAAAGATCAAAGTTTGCGGGAAG
AAAAGAAAAGGATGCACGAAAGGGCAGATCTCCGACTTGCCTTTAACGTC
ACCACATAACCTAATCTTTATGAAGAAGGAGCGCAGACCGAAACGGTCTA
AACATTGGTCATCAGCCGACGAAAGCGACTTTGTTTTGGCTGACGTTCAT
TATCATATCGAATGTGCCGAAAAATCGAATGGTCCTATTGTGTTGGCGGA
AAATGTAAATCCTCTTACAGAAGAAGAGATTGTACTTCTCAAAGAGAAAG
GATTTACTCTATAAGGGATCTACAACACAAACGATCATTGGAATCTATTG
CTTATATTTCCAAAACAAAAGCAACTTTGGTTGGCTAACCCACTTGGTGA
AGGAACAATTGAACAACAAAATATTGTCAGGACATGGGAATCGATAATGG
CTTTGAACTTTAAAGAATCCACTCCTTGGACAATATATTCGCAGCAACAT
GCAATTCAAGAGGATGCTGTCTCGTGTGGTGTTTTCTGTCTGAAGTTTTT
AGAATCATTCCTCCAGAGTAGGACATTACCGTCAAATTTTGAGTTAAAAG
ACGTATTTGCGTACCGTCAAAGAATTGGGTCGCAACTTCTCCGCAGTGGA
GGTTATGGAACTTGGACCAAACGGATATGTAGGATTTGTGGTAGAAATGA
TCCACCAAGATGTAATTTTTCAAGTGTTCCCAAACGTACGAAATGGATTG
AATGTGAAAACTGCAAGCCAAAAAGATGGTTCCACCTCTTATGCCTTGGA
TCGGACGAATCATCCAAGGATATGTCCTTCGATTGTGATAAGGAAATAAA
AGTAGCAGTTAAGCATTCGTTAAAACCCGGACAGCTTCTTTTGAAACGAC
GAATGAACAAAAAGATCAAAGTTTGCGGGAAGAAAAGAAAAGGATGCACG
AAAGGGCAGATCTCCGACTTGCCTTTAACGTCACCACATAACCTAATCTT
TATGAAGAAGGAGCGCAGACCGAAACGGTCTAAACATTGGTCATCAGCCG
ACGAAAGCGACTTTGTTTTGGCTGACGTTCATTATCATATCGAATGTGCC
GAAAAATCGAATGGTCCTATTGTGTTGGCGGAAAATGTAAATCCTCTTAC
AGAAGAAGAGATTGTACTTCTCAAAGAGAAAGGATTTACTCTATAAGGGA
TCTACAACACAAACGATCATTGGAATCTATTGCTTATATTTCCAAAACAA
AAGCAACTTTGGTTGGCTAACCCACTTGGTGAAGGAACAATTGAACAACA
AAATATTGTCAGGACATGGGAATCGATAATGGCTTTGAACTTTAAAGAAT
CCACTCCTTGGACAATATATTCGCAGCAACATGCAATTCAAGAGGATGCT
GTCTCGTGTGGTGTTTTCTGTCTGAAGTTTTTAGAATCATTCCTCCAGAG
TAGGACATTACCGTCAAATTTTGAGTTAAAAGACGTATTTGCGTACCGTC
AAAGAATTGGGTCGCAACTTCTCCGCAGTGGAGGTTATGGAACTTGGACC
AAACGGATATGTAGGATTTGTGGTAGAAATGATCCACCAAGATGTAATTT
TTCAAGTGTTCCCAAACGTACGAAATGGATTGAATGTGAAAACTGCAAGC
CAAAAAGATGGTTCCACCTCTTATGCCTTGGATCGGACGAATCATCCAAG
GATATGTCCTTCGATTGTGATAAGGAAATAAAAGTAGCAGTTAAGCATTC
GTTAAAACCCGGACAGCTTCTTTTGAAACGACGAATGAACAAAAAGATCA
AAGTTTGCGGGAAGAAAAGAAAAGGATGCACGAAAGGGCAGATCTCCGAC
TTGCCTTTAACGTCACCACATAACCTAATCTTTATGAAGAAGGAGCGCAG
ACCGAAACGGTCTAAACATTGGTCATCAGCCGACGAAAGCGACTTTGTTT
TGGCTGACGTTCATTATCATATCGAATGTGCCGAAAAATCGAATGGTCCT
ATTGTGTTGGCGGAAAATGTAAATCCTCTTACAGAAGAAGAGATTGTACT
TCTCAAAGAGAAAGGATTTACTCTATAAGGGATCTACAACACAAACGATC
ATTGGAATCTATTGCTTATATTTCCAAAACAAAAGCAACTTTGGTTGGCT
AACCCACTTGGTGAAGGAACAATTGAACAACAAAATATTGTCAGGACATG
GGAATCGATAATGGCTTTGAACTTTAAAGAATCCACTCCTTGGACAATAT
ATTCGCAGCAACATGCAATTCAAGAGGATGCTGTCTCGTGTGGTGTTTTC
TGTCTGAAGTTTTTAGAATCATTCCTCCAGAGTAGGACATTACCGTCAAA
TTTTGAGTTAAAAGACGTATTTGCGTACCGTCAAAGAATTGGGTCGCAAC
TTCTCCGCAGTGGAGGTTATGGAACTTGGACCAAACGGATATGTAGGATT
TGTGGTAGAAATGATCCACCAAGATGTAATTTTTCAAGTGTTCCCAAACG
TACGAAATGGATTGAATGTGAAAACTGCAAGCCAAAAAGATGGTTCCACC
TCTTATGCCTTGGATCGGACGAATCATCCAAGGATATGTCCTTCGATTGT
GATAAGGAAATAAAAGTAGCAGTTAAGCATTCGTTAAAACCCGGACAGCT
TCTTTTGAAACGACGAATGAACAAAAAGATCAAAGTTTGCGGGAAGAAAA
GAAAAGGATGCACGAAAGGGCAGATCTCCGACTTGCCTTTAACGTCACCA
CATAACCTAATCTTTATGAAGAAGGAGCGCAGACCGAAACGGTCTAAACA
TTGGTCATCAGCCGACGAAAGCGACTTTGTTTTGGCTGACGTTCATTATC
ATATCGAATGTGCCGAAAAATCGAATGGTCCTATTGTGTTGGCGGAAAAT
GTAAATCCTCTTACAGAAGAAGAGATTGTACTTCTCAAAGAGAAAGGATT
TACTCTATAAGGGATCTACAACACAAACGATCATTGGAATCTATTGCTTA
TATTTCCAAAACAAAAGCAACTTTGGTTGGCTAACCCACTTGGTGAAGGA
ACAATTGAACAACAAAATATTGTCAGGACATGGGAATCGATAATGGCTTT
GAACTTTAAAGAATCCACTCCTTGGACAATATATTCGCAGCAACATGCAA
TTCAAGAGGATGCTGTCTCGTGTGGTGTTTTCTGTCTGAAGTTTTTAGAA
TCATTCCTCCAGAGTAGGACATTACCGTCAAATTTTGAGTTAAAAGACGT
ATTTGCGTACCGTCAAAGAATTGGGTCGCAACTTCTCCGCAGTGGAGGTT
ATGGAACTTGGACCAAACGGATATGTAGGATTTGTGGTAGAAATGATCCA
CCAAGATGTAATTTTTCAAGTGTTCCCAAACGTACGAAATGGATTGAATG
TGAAAACTGCAAGCCAAAAAGATGGTTCCACCTCTTATGCCTTGGATCGG
ACGAATCATCCAAGGATATGTCCTTCGATTGTGATAAGGAAATAAAAGTA
GCAGTTAAGCATTCGTTAAAACCCGGACAGCTTCTTTTGAAACGACGAAT
GAACAAAAAGATCAAAGTTTGCGGGAAGAAAAGAAAAGGATGCACGAAAG
GGCAGATCTCCGACTTGCCTTTAACGTCACCACATAACCTAATCTTTATG
AAGAAGGAGCGCAGACCGAAACGGTCTAAACATTGGTCATCAGCCGACGA
AAGCGACTTTGTTTTGGCTGACGTTCATTATCATATCGAATGTGCCGAAA
AATCGAATGGTCCTATTGTGTTGGCGGAAAATGTAAATCCTCTTACAGAA
GAAGAGATTGTACTTCTCAAAGAGAAAGGATTTACTCTATAAGGGATCTA
CAACACAAACGATCATTGGAATCTATTGCTTATATTTCCAAAACAAAAGC
AACTTTGGTTGGCTAACCCACTTGGTGAAGGAACAATTGAACAACAAAAT
ATTGTCAGGACATGGGAATCGATAATGGCTTTGAACTTTAAAGAATCCAC
TCCTTGGACAATATATTCGCAGCAACATGCAATTCAAGAGGATGCTGTCT
CGTGTGGTGTTTTCTGTCTGAAGTTTTTAGAATCATTCCTCCAGAGTAGG
ACATTACCGTCAAATTTTGAGTTAAAAGACGTATTTGCGTACCGTCAAAG
AATTGGGTCGCAACTTCTCCGCAGTGGAGGTTATGGAACTTGGACCAAAC
GGATATGTAGGATTTGTGGTAGAAATGATCCACCAAGATGTAATTTTTCA
AGTGTTCCCAAACGTACGAAATGGATTGAATGTGAAAACTGCAAGCCAAA
AAGATGGTTCCACCTCTTATGCCTTGGATCGGACGAATCATCCAAGGATA
TGTCCTTCGATTGTGATAAGGAAATAAAAGTAGCAGTTAAGCATTCGTTA
AAACCCGGACAGCTTCTTTTGAAACGACGAATGAACAAAAAGATCAAAGT
TTGCGGGAAGAAAAGAAAAGGATGCACGAAAGGGCAGATCTCCGACTTGC
CTTTAACGTCACCACATAACCTAATCTTTATGAAGAAGGAGCGCAGACCG
AAACGGTCTAAACATTGGTCATCAGCCGACGAAAGCGACTTTGTTTTGGC
TGACGTTCATTATCATATCGAATGTGCCGAAAAATCGAATGGTCCTATTG
TGTTGGCGGAAAATGTAAATCCTCTTACAGAAGAAGAGATTGTACTTCTC
AAAGAGAAAGGATTTACTCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_009880XLOC_009880Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017665-proteinTCONS_00017665-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00017665-exon-sc0000273-1491911889:63955..63991TCONS_00017665-exon-sc0000273-1491911889:63955..63991Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:63955..63991TCONS_00017665-exon-sc0000273-1510915933:63955..63991Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:63955..63991TCONS_00017665-exon-sc0000273-1575043694:63955..63991Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1491911889:64139..64227TCONS_00017665-exon-sc0000273-1491911889:64139..64227Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:64139..64227TCONS_00017665-exon-sc0000273-1510915933:64139..64227Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:64139..64227TCONS_00017665-exon-sc0000273-1575043694:64139..64227Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1491911889:65197..65302TCONS_00017665-exon-sc0000273-1491911889:65197..65302Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:65197..65302TCONS_00017665-exon-sc0000273-1510915933:65197..65302Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:65197..65302TCONS_00017665-exon-sc0000273-1575043694:65197..65302Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1491911889:65925..66030TCONS_00017665-exon-sc0000273-1491911889:65925..66030Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:65925..66030TCONS_00017665-exon-sc0000273-1510915933:65925..66030Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:65925..66030TCONS_00017665-exon-sc0000273-1575043694:65925..66030Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1491911889:66284..66378TCONS_00017665-exon-sc0000273-1491911889:66284..66378Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:66284..66378TCONS_00017665-exon-sc0000273-1510915933:66284..66378Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:66284..66378TCONS_00017665-exon-sc0000273-1575043694:66284..66378Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1491911889:66674..66769TCONS_00017665-exon-sc0000273-1491911889:66674..66769Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:66674..66769TCONS_00017665-exon-sc0000273-1510915933:66674..66769Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:66674..66769TCONS_00017665-exon-sc0000273-1575043694:66674..66769Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1491911889:67415..67886TCONS_00017665-exon-sc0000273-1491911889:67415..67886Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1510915933:67415..67886TCONS_00017665-exon-sc0000273-1510915933:67415..67886Clytia hemisphaericaexon
TCONS_00017665-exon-sc0000273-1575043694:67415..67886TCONS_00017665-exon-sc0000273-1575043694:67415..67886Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000273supercontigsc0000273:63955..67886 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.40523	0.457604	0.295507	0	1.19133	1.03635	0.507874	1.09241	0.319744	0.973432	1.27371	0.292298	0.595182	0.457608	0.459444	0.416087	0.533809	0.854796	0.339694	0.274883	0.895215	0.46444	0.508445	0.616812	0.22096	0.817368	0.117795	0.251541	0.0627031	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR003653Peptidase_C48_C
IPR011011Znf_FYVE_PHD
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008234cysteine-type peptidase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017665 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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