|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00019267 ID=TCONS_00019267|Name=TCONS_00019267|organism=Clytia hemisphaerica|type=transcript|length=2241bp
CGGGAAATTCCGCTGTCTAAAAAATCACCAGCTGATATTTATTTGATTTG
CCATTGAAATTTCAACAAATTCGAAAATTTCCCCCAAaacatttgatgaa
aattacctaggtaataaattgaaatttctaatgcctaatttttccatttt
ttgttacaaagtcaaaagaaattcccgaagaaattggagaaaaattcCTC
TATCTTCAATCTATGATTCCACCCCAGCCTCCTTGGTCCGCATTTTGCAC
GTGTTGAGCAATAAGATTCGCAGGGCCGTGACGATCTCCTCTTGCCATCT
GCATTTCGGTTGGAGCTGATTTCGCTTAGACTTTTCTATTAAAAATGTCA
ACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaaatata
tgtTGGAAATCTTGGAACCAATGTAACCAGAGATGACTTAGTAAATTTGT
TTGGACTTGCAGCCACTCCATACTTGAAAACCTCATGTACAATTGAAATT
GCTACTTGTGAAAAAACTGGAAAATCAAAGAACTTTGCTTTTGTTAATGT
TCCTGAACATGTCCATAGTGAACTTATGAAATTGAATGGTATTGAATTTT
ATGGACGACAATTGGTTATCGAAGAAGCCAAAACAAAAGATGAtgagaaa
aatgatgaaaacaaagaaaacagaaatAAACAGCGACCTTACAACAACAA
CAGACGTGGACGTGGTGGTTATAATAGAAACAATGGTAGAGGTGGTAACA
GATATGACCAACGAAAAAAATACACTGTTCCAGCCATAGAAGCAGATCAA
GTTTTTTCTTTGGTTGATGGCGGATGCAATTTAACAAATCCAAGATTCAA
CCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTATTCAAA
AAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAGTTGTC
ATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATTCATCC
ACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAATCGAGG
AGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTTTGGAT
TTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTCAAGGA
ACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCATGACC
GTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTGATGCC
CTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAAATTAA
AGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCTTTGTA
AAGaaaaatatggcGGCAGTCTTCGTGAAGCAATCAAAGACGGTACTCTT
CCATTAGACAAAATTATCGTTCAAACAAATTCTCCTTACATGACACCATC
TGTACCACAAGCAGAAATTGATCCAATCAGTCAAACATTACTCAATTCGT
GTTGTGCAGATAACGAACCGTGCACGTTGTCAGTCATCGTCCGTTACATT
GCAAGGCTTATTTCACAAGAGCCGAGTCAAGTTGCAGATGTCACAACTGC
TACAGCTATGAAATTATTCAGATTCACCAAAAGCGAAAATTAAtgaatat
ataatataaatacAGACAATTTTAGCTTTTAAATTAAGATCAAAATGCAG
ATGGCAGGTAAAATGATGCAGTCATAAATTCTCTTAGAATTTGAAGCATT
CGTGATTACATTTTTGTGTTGGATATTTTTGGAAAGAGCCatcgaaattt
ttctttttcgtgtttttatgagatttttattcgagatttctttattcttt
tcaTACCACTTTTCATTTCTTGTTGTGTTCGTTCCAActgaaaagttgtt
ttttttgtttcattttgattcTTCTTGGAGATTTATATAAGTCATATAAA
AACCTTTCCAAAGTCGGTTACTGCATCAATTTACGGTGGTGGACAGGGTA
GCCTCACACCAACAGGTGTGTGGTCGCTATTTCTACCAGACATTTGATTA
CCGTGGGTATAGCAATTTTTACCAGTTTTTGCAATATGCACAGTAATTGA
ATTAATATATTCCCTAGTGAGTTTATTTTGCTAGGGTAGGTATGTATTTT
ATGACTATTTCATCCTTGTCAAAGATACAGACCGCTATGGAAATGCTTTC
CtttcagattattttgcttTCCCCACCTTTTGGACCTGCCG Run BLAST on NCBI protein sequence of TCONS_00019267-protein >TCONS_00019267-protein ID=TCONS_00019267-protein|Name=TCONS_00019267-protein|organism=Clytia hemisphaerica|type=polypeptide|length=432bp
MSTGTTVAAPDAPTNKKIYVGNLGTNVTRDDLVNLFGLAATPYLKTSCTI
EIATCEKTGKSKNFAFVNVPEHVHSELMKLNGIEFYGRQLVIEEAKTKDD
EKNDENKENRNKQRPYNNNRRGRGGYNRNNGRGGNRYDQRKKYTVPAIEA
DQVFSLVDGGCNLTNPRFNQFIDYVIARALKGGIQKMVVTGLKMNGCKSA
VVMSKTRPNILYAAVGIHPHFVKDDWTDKSLNQIEELVKDPCVVAIGECG
LDFNKDYSPRELQETAFKEQINLAVRYKKTLLVHDRDAHQSILDILEPFT
DALPPVIIHCFTGTKDQIKAYIDRGYYIGVTGYLCKEKYGGSLREAIKDG
TLPLDKIIVQTNSPYMTPSVPQAEIDPISQTLLNSCCADNEPCTLSVIVR
YIARLISQEPSQVADVTTATAMKLFRFTKSEN Run BLAST on NCBI transcript from alignment at sc0000323:375334..382460+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00019267 ID=TCONS_00019267|Name=TCONS_00019267|organism=Clytia hemisphaerica|type=transcript|length=7127bp|location=Sequence derived from alignment at sc0000323:375334..382460+ (Clytia hemisphaerica)
CGGGAAATTCCGCTGTCTAAAAAATCACCAGCTGATATTTATTTGATTTG
CCATTGAAATTTCAACAAATTCGAAAATTTCCCCCAAaacatttgatgaa
aattacctaggtaataaattgaaatttctaatgcctaatttttccatttt
ttgttacaaagtcaaaagaaattcccgaagaaattggagaaaaattcCTC
TATCTTCAATCTATGATTCCACCCCAGCCTCCTTGGTCCGCATTTTGCAC
GTGTTGAGCAATAAGATTCGCAGGGCCGTGACGATCTCCTCTTGCCATCT
GCATTTCGGTTGGAGCTGATTTCGCTTAGACTTTTCTATTAAAAATGTCA
ACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaaatata
tgtTGGTAAGTTTGTTCTTCTAAAgtatgatgatttttgatattttttat
aacatAAATTGTGGCTTACTCATTAGCATATGTAACCAGCAAATTGTAAC
TATTAACTGCCCATTTATGGATCTGCACGTGTTAAATCAGATCATGTTAT
GACTTAGCAGGTTTTACTTCAAAAGCTGAAGCTCAACCACTTTTTTCCTT
TAACAATTTTGATAcaccatcattcaaatcagaaagtgAAGATAGTATAC
TACATGCTCTGATGAGCAGGTTTTGGCCTACTTGAAGTTAAAAATTTCAC
ATTGTCGATTGGTTTAGATCTACTAACCTGCAAATTGAACTAGTCAAGTT
AAGACCATACTGTATTTTATCATGTGCCAAAAAGTATTAAATtaaaccag
acggtgtcaatcgaacgaatcgaacgccgaatcaattgatcACAGTCGAA
TAATTGCGNcaaattaaatttttttctttttatggccaatttttcacaat
ttaccaCTGATATCAATGTTTTCAGCCTGATTTCAGATTTAAAAATCTGG
CATCCGCCAAATcaaattctcgccaaaataagctTTTTCCAtgatccacc
aaattaaattctcgccaaaataagctTTTTCGGCCATCTGCCAAAtgaaa
ttcctgccaaaatttcttcctgtaCAATACCATAGTGTCCTCAACCCATT
TAAAAAGGGGATTCTGATTTGGCCCCATTTTTTAAGGTatggggaaaatg
aaaaatttaaataataaagAGGATGAAAACCAGAAATTTTGATTGGGGGA
ATTTCACTGATCTCAAGGCGATCTCGTAGAAGacctgtttaagcaataaa
atcagcaaaccTTACTtgaaccaaactaatttttcaacaaaacttCATTT
TTCAAGCAGTTTCAAGGCTatcattttcaagatttctaaaactttaaact
tgataaggcatttttatgttaaaatAATGTTAAATTTATGTTAACCAAAC
AGGGGAACTGCAAAATTGTCATATAACCAGGCGATGCCAATTGAACTGTT
CGATTACCAAACCAAATCAAACAGTCATTGAACCGAGATTTTCTGGTTTG
ATTACTGCTCGATCAGGTTCGGTATTTCATGCGAAGAAATTCTGGTTCGA
TTACAAAAATTGATTCGATGGAAATAAttgggggaaagcaaaaaaagaGG
GGTGGaccaaataaaattttaatatgGCGGGGATAAAAAAGAGGGGCACT
GTCTGACTTTCTTTCTTTtggtgaaaaatcttaaaattcaataaaaccTC
TAAAAAGTTTTCGCTTTCGCCGGCCGTCGTACAGCTTTACCGAAAAATTT
GTCACTTTTCAACTTCCAGATGAGGAAAAATCTTCCCAAATGGGCAGAAA
AAATCTGAGTAAATTCTTCCCATCTAGGAAGTTTTCCCAATTCGGAAGAA
TCTTACCGATCAGGTTAATGTAGACTGTTAGAGCTGTAGCATCAACGGCT
GCCAATACCCCAATTGGAAAATTGGATATGAGCAGGCGCATTTTAGTACT
GCATGAGACAGGAGTGATTAATGAGAGCAAATGCAACTGAAGCCATCGAA
CAGCAATTCCTGGGTGATATCGATTAcgatttgattgcgttcaacaatca
aatgacaatttctttgattgcgttcaatttACACTGGCAGAATTAACTGA
ACCCTTTTGTGCAATTGTGCGATTTTGAACTCTTTCAAAGTCTGGAACAT
GACCTGAACTTGTCAGCACATGTTTTGTGGGGGGTGTTCAGGTCAGGTTT
TTGGAGGCAAAATCCAAAATCTTGTAGCTGAAACTTTGCTTGAATATTGT
TCTTTTAATGAACCTTTGCAAGGCATATTTTATATCAcaattttcatcag
aatttcatgcCCTTTTCCCTGGGACCagcagattttgaatattttcgaaG
AATTAAAAGTTTTGGTTTGATTGAAAGGTCGACAATATTTCAGGAATGGT
CACGCATGTGCAGTAAGTATGCAATGCGTAAGTAAAAACAAGTGCAAGAT
AATAAATCTTTTTCACACAAAAGAATGTTTCCATGCATATATAGTAAAAT
TGAAGGTTTTTCTGTATTTTGTatcaaaaaattatattgtaaattcgttt
gaaatcaactttgctattttttgtttgtttacaaaaacaatagaatgaga
ggtcacatctcgaaacaactttcaatttttcattttgctttGAGATTATT
GTTGTTTAAAGAAGTAGCTTTTATCTATCTGACTAAGCACTGAGGTGTCG
CCCTTTCTGGTGCTTCCTTTCCTCcaaataccgggtgacccagaAAAAGT
ATAAGGGTTTGGAGATTAACTGTGTCTGAAATAATTTGAACTTTTACGTA
ATTCTTTTCACATTGTAAAGATGAAAGGCATACTTAAACTTTGTATAACT
TTTTTAGATTTAGTTAGTGGTTCTCAAGTTttaagcttttgaagtcaaaa
ttccctttgaaaaatgtcaaaaatcatcaaaaaatttggTATCAAATTTA
ATTATAATGCTAAGCAAACCTGAGAAATATTTCTCCCACCGGGCCAGTCT
GGAAATAGTGCACAATACTTAAATCTATTGATAAAattgttttgcttaaa
atttctgTTATGATTTAATCTTATTAAGCTGGGTGTCCACTGAAAAAAAG
TAAGTTAGTCTCAAATACCTATTGACAACAAATAAATCCAGACATATGTC
Tggaattaaaaaatcttttgttctttttaaatacaaagtaaaaaataaac
agtatagaataaaatgttttcattttttcatcacTTATTTTTTTCGCCCT
ATcgcaaataaaacaaaaagtatttAATTGTctggaattatttttttgcg
aCAAACAAATTTGcgacaaacttattttttccagTGGACACACAGCTTTA
AAAAGCAAATTCCCGGtaggggtcactagtggccgcccatagcagtgcct
atagaccaagagtgaGGCCTAAAAGCCATATTTAATCAGTGTGATAAACA
ATGCTGAAGGCGTCTGGAAAGGATGGCTTTGTTCATTTGCAAGGGCTCAG
TAGAGGGCTCTCTAGTAAAGGTCTTATGTAAATCCTATGGAGGTTTGCTG
GAGAAAAACCTGTCCTACCTAGGGATTGGTTAGGGATAAATCTAGATTTC
CAGGTCAAGAAATGTTTTGATAGCCTAGCAAGTCAAAAAGGTTTTCATGT
TCATGTCTGAGACCAGCTGAGACAAATAACTTTGCTGTGATGTTTTTTCC
ATTATCATCCATCTTAATTATTGAATTCTTTATTTTGTGTTTAGGAAATC
TTGGAACCAATGTAACCAGAGATGACTTAGTAAATTTGTTTGGACTTGCA
GCCACTCCATACTTGAAAACCTCATGTACAATTGAAATTGCTACTTGTGA
AAAAACTGGAAAATCAAAGAACTTTGCTTTTGTTAATGTTCCTGAACATG
TCCATAGTGAACTTATGAAATTGAATGGTATTGAATTTTATGGACGACAA
TTGGTTATCGAAGAAGCCAAAACAAAAGATGAtgagaaaaatgatgaaaa
caaagaaaacagaaatAAACAGCGACCTTACAACAACAACAGACGTGGAC
GTGGTGGTTATAATAGAAACAATGGTAGAGGTGGTAACAGATATGACCAA
CGAAAAAAATACACTGTTCCAGCCATAGAAGCAGATCAAGTTTTTTCTTT
GGTTGATGGCGGATGCAATTTAACAAATCCAAGGTTTCCTCAAATTTAAA
TCTAAGATTTCCTCATTTAAAGAAACTGAACTGACAAGCTTGTGTAGTGC
TAGAGTTCCAGAGACAAATTTTAAGAGCTGCCGTATTACTTTGACAAAGT
TTGCCTGCAAATGTTTAACTTTGAGATGTAgaaataggtcaaaatcagtt
aaaaTACTATAATAGTACGTTTGCTACTGTTTGGTATCATATATATCATA
CTTCCTTTTagctacttgtttcaaataaactcCCCTCTATAGGAGGGGTT
ATTCAAAGGGGCATTTATGGAaaaatttttcctcaaaaaatgtGTTTATT
TATAAAGTAACGGTAATGTTCTAACAAACCAAAATTGTTGTAAGCAAAAT
AGACCAGAATAGACATGAAACTTCTCAATTTTATTAAAATGCTGGAACAG
CTGATGATACTGAAATCTTGGAATACTGATCTTAGAAGCGAAGGACATTC
TACTATTCGTCTGAGCAATAGCTATAAAGTCTATCTATCATTTTAGATTC
AACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTATTCA
AAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAGTTG
TCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATTCAT
CCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAATCGA
GGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTTTGG
ATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTCAAG
GAACAGGTAACCTTTACATGCTGAATTGCGTAAAGCTATATGAGAAGTTT
GAGATTCAATTGGCTTGAGAGTGTCTTGAAAATAGCTTCTCGTCAAGCTA
CATTCACACATTGAAAATTGAagagtttgaatttttcttaatttttgttt
cACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCATGAC
CGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTGATGC
CCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAAATTA
AAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCTTTGT
AAAGGTATGATCTTGCTTTGAACCAGATTCTTTTCTTTGGATTTCATCCT
ATTTTTCTGATTCTTTTCACATCTAGGTATTAATCTATTTCTTTCCCGAG
GAATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttttttgtacattaggag
taatgttcaagctctatcaatacttttacctaaataattcaaagaaataa
aattatgacggaatattgtcggattttttataccaatgttgaaatacagg
cggcaacgaagctcgcttcaaagagacaataaaagatagatgtccagtcg
tttatatgttcatgctatAACCAAACAGTTAAAGTTAACCTGCAGTCCCG
TTTTTCGCTGTCCACTcttctcatttttttcaatttcagaaaaatatggc
GGCAGTCTTCGTGAAGCAATCAAAGACGGTACTCTTCCATTAGACAAAAT
TATCGTTCAAACAAATTCTCCTTACATGACACCATCTGTACCACAAGCAG
AAATTGATCCAATCAGTCAAACATTACTCAATTCGTGTTGTGCAGATAAC
GAACCGTGCACGTTGTCAGTCATCGTCCGTTACATTGCAAGGCTTATTTC
ACAAGAGCCGAGTCAAGTTGCAGATGTCACAACTGCTACAGCTATGAAAT
TATTCAGATTCACCAAAAGCGAAAATTAAtgaatatataatataaatacA
GACAATTTTAGCTTTTAAATTAAGATCAAAATGCAGATGGCAGGTAAAAT
GATGCAGTCATAAATTCTCTTAGAATTTGAAGCATTCGTGATTACATTTT
TGTGTTGGATATTTTTGGAAAGAGCCatcgaaatttttctttttcgtgtt
tttatgagatttttattcgagatttctttattcttttcaTACCACTTTTC
ATTTCTTGTTGTGTTCGTTCCAActgaaaagttgttttttttgtttcatt
ttgattcTTCTTGGAGATTTATATAAGTCATATAAAAACCTTTCCAAAGT
CGGTTACTGCATCAATTTACGGTGGTGGACAGGGTAGCCTCACACCAACA
GGTGTGTGGTCGCTATTTCTACCAGACATTTGATTACCGTGGGTATAGCA
ATTTTTACCAGTTTTTGCAATATGCACAGTAATTGAATTAATATATTCCC
TAGTGAGTTTATTTTGCTAGGGTAGGTATGTATTTTATGACTATTTCATC
CTTGTCAAAGATACAGACCGCTATGGAAATGCTTTCCtttcagattattt
tgcttTCCCCACCTTTTGGACCTGCCG Coding sequence (CDS) from alignment at sc0000323:375334..382460+ >TCONS_00019267 ID=TCONS_00019267|Name=TCONS_00019267|organism=Clytia hemisphaerica|type=CDS|length=6495bp|location=Sequence derived from alignment at sc0000323:375334..382460+ (Clytia hemisphaerica)
ATGTCAACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaa
aatatatgtTGGAAATCTTGGAACCAATGTAACCAGAGATGACTTAGTAA
ATTTGTTTGGACTTGCAGCCACTCCATACTTGAAAACCTCATGTACAATT
GAAATTGCTACTTGTGAAAAAACTGGAAAATCAAAGAACTTTGCTTTTGT
TAATGTTCCTGAACATGTCCATAGTGAACTTATGAAATTGAATGGTATTG
AATTTTATGGACGACAATTGGTTATCGAAGAAGCCAAAACAAAAGATGAt
gagaaaaatgatgaaaacaaagaaaacagaaatAAACAGCGACCTTACAA
CAACAACAGACGTGGACGTGGTGGTTATAATAGAAACAATGGTAGAGGTG
GTAACAGATATGACCAACGAAAAAAATACACTGTTCCAGCCATAGAAGCA
GATCAAGTTTTTTCTTTGGTTGATGGCGGATGCAATTTAACAAATCCAAG
ATTCAACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTA
TTCAAAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCA
GTTGTCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCAT
TCATCCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAA
TCGAGGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGT
TTGGATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTT
CAAGGAACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTC
ATGACCGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACT
GATGCCCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCA
AATTAAAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATC
TTTGTAAAGaaaaatatggcGGCAGTCTTCGTGAAGCAATCAAAGACGGT
ACTCTTCCATTAGACAAAATTATCGTTCAAACAAATTCTCCTTACATGAC
ACCATCTGTACCACAAGCAGAAATTGATCCAATCAGTCAAACATTACTCA
ATTCGTGTTGTGCAGATAACGAACCGTGCACGTTGTCAGTCATCGTCCGT
TACATTGCAAGGCTTATTTCACAAGAGCCGAGTCAAGTTGCAGATGTCAC
AACTGCTACAGCTATGAAATTATTCAGATTCACCAAAAGCGAAAATTAAA
TGTCAACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaa
atatatgtTGGAAATCTTGGAACCAATGTAACCAGAGATGACTTAGTAAA
TTTGTTTGGACTTGCAGCCACTCCATACTTGAAAACCTCATGTACAATTG
AAATTGCTACTTGTGAAAAAACTGGAAAATCAAAGAACTTTGCTTTTGTT
AATGTTCCTGAACATGTCCATAGTGAACTTATGAAATTGAATGGTATTGA
ATTTTATGGACGACAATTGGTTATCGAAGAAGCCAAAACAAAAGATGAtg
agaaaaatgatgaaaacaaagaaaacagaaatAAACAGCGACCTTACAAC
AACAACAGACGTGGACGTGGTGGTTATAATAGAAACAATGGTAGAGGTGG
TAACAGATATGACCAACGAAAAAAATACACTGTTCCAGCCATAGAAGCAG
ATCAAGTTTTTTCTTTGGTTGATGGCGGATGCAATTTAACAAATCCAAGA
TTCAACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTAT
TCAAAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAG
TTGTCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATT
CATCCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAAT
CGAGGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTT
TGGATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTC
AAGGAACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCA
TGACCGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTG
ATGCCCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAA
ATTAAAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCT
TTGTAAAGaaaaatatggcGGCAGTCTTCGTGAAGCAATCAAAGACGGTA
CTCTTCCATTAGACAAAATTATCGTTCAAACAAATTCTCCTTACATGACA
CCATCTGTACCACAAGCAGAAATTGATCCAATCAGTCAAACATTACTCAA
TTCGTGTTGTGCAGATAACGAACCGTGCACGTTGTCAGTCATCGTCCGTT
ACATTGCAAGGCTTATTTCACAAGAGCCGAGTCAAGTTGCAGATGTCACA
ACTGCTACAGCTATGAAATTATTCAGATTCACCAAAAGCGAAAATTAAAT
GTCAACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaaa
tatatgtTGGAAATCTTGGAACCAATGTAACCAGAGATGACTTAGTAAAT
TTGTTTGGACTTGCAGCCACTCCATACTTGAAAACCTCATGTACAATTGA
AATTGCTACTTGTGAAAAAACTGGAAAATCAAAGAACTTTGCTTTTGTTA
ATGTTCCTGAACATGTCCATAGTGAACTTATGAAATTGAATGGTATTGAA
TTTTATGGACGACAATTGGTTATCGAAGAAGCCAAAACAAAAGATGAtga
gaaaaatgatgaaaacaaagaaaacagaaatAAACAGCGACCTTACAACA
ACAACAGACGTGGACGTGGTGGTTATAATAGAAACAATGGTAGAGGTGGT
AACAGATATGACCAACGAAAAAAATACACTGTTCCAGCCATAGAAGCAGA
TCAAGTTTTTTCTTTGGTTGATGGCGGATGCAATTTAACAAATCCAAGAT
TCAACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTATT
CAAAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAGT
TGTCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATTC
ATCCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAATC
GAGGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTTT
GGATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTCA
AGGAACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCAT
GACCGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTGA
TGCCCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAAA
TTAAAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCTT
TGTAAAGaaaaatatggcGGCAGTCTTCGTGAAGCAATCAAAGACGGTAC
TCTTCCATTAGACAAAATTATCGTTCAAACAAATTCTCCTTACATGACAC
CATCTGTACCACAAGCAGAAATTGATCCAATCAGTCAAACATTACTCAAT
TCGTGTTGTGCAGATAACGAACCGTGCACGTTGTCAGTCATCGTCCGTTA
CATTGCAAGGCTTATTTCACAAGAGCCGAGTCAAGTTGCAGATGTCACAA
CTGCTACAGCTATGAAATTATTCAGATTCACCAAAAGCGAAAATTAAATG
TCAACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaaat
atatgtTGGAAATCTTGGAACCAATGTAACCAGAGATGACTTAGTAAATT
TGTTTGGACTTGCAGCCACTCCATACTTGAAAACCTCATGTACAATTGAA
ATTGCTACTTGTGAAAAAACTGGAAAATCAAAGAACTTTGCTTTTGTTAA
TGTTCCTGAACATGTCCATAGTGAACTTATGAAATTGAATGGTATTGAAT
TTTATGGACGACAATTGGTTATCGAAGAAGCCAAAACAAAAGATGAtgag
aaaaatgatgaaaacaaagaaaacagaaatAAACAGCGACCTTACAACAA
CAACAGACGTGGACGTGGTGGTTATAATAGAAACAATGGTAGAGGTGGTA
ACAGATATGACCAACGAAAAAAATACACTGTTCCAGCCATAGAAGCAGAT
CAAGTTTTTTCTTTGGTTGATGGCGGATGCAATTTAACAAATCCAAGATT
CAACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTATTC
AAAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAGTT
GTCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATTCA
TCCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAATCG
AGGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTTTG
GATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTCAA
GGAACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCATG
ACCGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTGAT
GCCCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAAAT
TAAAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCTTT
GTAAAGaaaaatatggcGGCAGTCTTCGTGAAGCAATCAAAGACGGTACT
CTTCCATTAGACAAAATTATCGTTCAAACAAATTCTCCTTACATGACACC
ATCTGTACCACAAGCAGAAATTGATCCAATCAGTCAAACATTACTCAATT
CGTGTTGTGCAGATAACGAACCGTGCACGTTGTCAGTCATCGTCCGTTAC
ATTGCAAGGCTTATTTCACAAGAGCCGAGTCAAGTTGCAGATGTCACAAC
TGCTACAGCTATGAAATTATTCAGATTCACCAAAAGCGAAAATTAAATGT
CAACTGGTACAACAGTTGCAGCACCTGATGCACCtacaaataagaaaata
tatgtTGGAAATCTTGGAACCAATGTAACCAGAGATGACTTAGTAAATTT
GTTTGGACTTGCAGCCACTCCATACTTGAAAACCTCATGTACAATTGAAA
TTGCTACTTGTGAAAAAACTGGAAAATCAAAGAACTTTGCTTTTGTTAAT
GTTCCTGAACATGTCCATAGTGAACTTATGAAATTGAATGGTATTGAATT
TTATGGACGACAATTGGTTATCGAAGAAGCCAAAACAAAAGATGAtgaga
aaaatgatgaaaacaaagaaaacagaaatAAACAGCGACCTTACAACAAC
AACAGACGTGGACGTGGTGGTTATAATAGAAACAATGGTAGAGGTGGTAA
CAGATATGACCAACGAAAAAAATACACTGTTCCAGCCATAGAAGCAGATC
AAGTTTTTTCTTTGGTTGATGGCGGATGCAATTTAACAAATCCAAGATTC
AACCAGTTCATTGACTACGTTATTGCCCGTGCATTGAAAGGTGGTATTCA
AAAAATGGTTGTCACAGGACTTAAAATGAATGGATGTAAATCAGCAGTTG
TCATGTCTAAAACAAGACCAAATATTTTGTATGCAGCTGTAGGCATTCAT
CCACATTTTGTAAAGGATGACTGGACGGATAAATCACTTAATCAAATCGA
GGAGCTAGTGAAAGATCCTTGTGTTGTTGCCATTGGTGAATGTGGTTTGG
ATTTCAATAAAGACTATTCCCCAAGAGAATTACAAGAAACTGCCTTCAAG
GAACAGATCAATTTGGCTGTTCGCTACAAGAAAACTTTACTTGTTCATGA
CCGTGACGCTCATCAAAGTATTTTGGATATTCTTGAACCTTTCACTGATG
CCCTTCCACCAGTTATTATTCATTGCTTCACTGGAACTAAAGATCAAATT
AAAGCTTATATCGACCGTGGATATTATATTGGAGTAACTGGCTATCTTTG
TAAAGaaaaatatggcGGCAGTCTTCGTGAAGCAATCAAAGACGGTACTC
TTCCATTAGACAAAATTATCGTTCAAACAAATTCTCCTTACATGACACCA
TCTGTACCACAAGCAGAAATTGATCCAATCAGTCAAACATTACTCAATTC
GTGTTGTGCAGATAACGAACCGTGCACGTTGTCAGTCATCGTCCGTTACA
TTGCAAGGCTTATTTCACAAGAGCCGAGTCAAGTTGCAGATGTCACAACT
GCTACAGCTATGAAATTATTCAGATTCACCAAAAGCGAAAATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00019267-exon-sc0000323-1491911889:375334..375738 | TCONS_00019267-exon-sc0000323-1491911889:375334..375738 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1510915933:375334..375738 | TCONS_00019267-exon-sc0000323-1510915933:375334..375738 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1575043694:375334..375738 | TCONS_00019267-exon-sc0000323-1575043694:375334..375738 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1491911889:379078..379516 | TCONS_00019267-exon-sc0000323-1491911889:379078..379516 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1510915933:379078..379516 | TCONS_00019267-exon-sc0000323-1510915933:379078..379516 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1575043694:379078..379516 | TCONS_00019267-exon-sc0000323-1575043694:379078..379516 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1491911889:380030..380339 | TCONS_00019267-exon-sc0000323-1491911889:380030..380339 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1510915933:380030..380339 | TCONS_00019267-exon-sc0000323-1510915933:380030..380339 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1575043694:380030..380339 | TCONS_00019267-exon-sc0000323-1575043694:380030..380339 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1491911889:380489..380687 | TCONS_00019267-exon-sc0000323-1491911889:380489..380687 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1510915933:380489..380687 | TCONS_00019267-exon-sc0000323-1510915933:380489..380687 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1575043694:380489..380687 | TCONS_00019267-exon-sc0000323-1575043694:380489..380687 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1491911889:381573..382460 | TCONS_00019267-exon-sc0000323-1491911889:381573..382460 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1510915933:381573..382460 | TCONS_00019267-exon-sc0000323-1510915933:381573..382460 | Clytia hemisphaerica | exon |
| TCONS_00019267-exon-sc0000323-1575043694:381573..382460 | TCONS_00019267-exon-sc0000323-1575043694:381573..382460 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000323 | supercontig | sc0000323:375334..382460 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0016788 | hydrolase activity, acting on ester bonds |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0016788 |
hydrolase activity, acting on ester bonds |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00019267 vs. Swiss-Prot (Human)
Match: TATD1 (Putative deoxyribonuclease TATDN1 OS=Homo sapiens GN=TATDN1 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 5.003e-29 Identity = 88/297 (29.63%), Postives = 149/297 (50.17%), Query Frame = 3
Query: 804 FSLVDGGCNLTNPRFNQF----------IDYVIARALKGGIQKMVVTGLKMNGCKSAVVMSKTRPNILYAAVGIHP----HFVKD--DWTDKSLNQIEELVKDPCVVAIGECGLDFNK-DYSPRELQETAFKEQINLAVRYKKTLLVHDRDAHQSILDILEPFTDALPPVIIHCFTGTKDQIKAYIDRGYYIGVTGYLCKEKYGGSLREAIKDGTLPLDKIIVQTNSPYMTPSVPQAEIDPISQTL-------LNSCCAD-NEPCTLSVIVRYIARLISQEPSQVADVTTATAMKLF 1619
F +D G NLT+P F + VI RA++ G++K ++TG + K A+ +++T + ++ VG HP F K+ D K L + E K VVAIGECGLDF++ + P++ Q F++Q L+ + K + +H R++H LDI++ D ++H F GTK+ A ID YIG G C K +L E +K ++P +K++++T++P+ A I C D NEPC + I+ ++ + ++P ++A+ +K+F
Sbjct: 4 FKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQTN-GMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGK-VVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLDLYIGFNG--CSLKTEANL-EVLK--SIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF 293
The following BLAST results are available for this feature:
|
