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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021140 ID=TCONS_00021140|Name=TCONS_00021140|organism=Clytia hemisphaerica|type=transcript|length=3594bp
GTCGAAAACAAGAAACCTGACGGAAATGAAAACAAGAACAAACGAAAATT
GACTGATTTAAATGATTCAAAAAagaataagaagaaaaaaacattccaCG
AAGAACTACTTGATGTTCAGAGAgaacaaattgattttttcaaatcttcc
gAACAAAACTACACAAAATTCATGAGAGAGTTGGTGGAAAACCAACAAAA
ACATGAcgcagaagaaaaaaaacgcgATAGAGATTTTTTCTTACAGTTAG
GAAACATTTTATCTGGTGGTCCTGGTGgtcaaaatcaaaagtgaaaatat
tttggtaacacttgtcttatgttttttttctagaaaatttaaaagttgaa
aCATTATACTGTTTTTAACGGTTTTTAGTTAATATTTTAACATTTCACTC
TCATTGAACACTACATGAAAAGTACTACTCGTTTTGttctaaatatattt
tcaatattgTTCTTGTTTCTTCTCCCAGCGGATAAATGTCTTGGTTAACT
CGTCGTTGTTGCCTTGCTCGCCTCTCGTTTCTCAGTATGTTATCTAACAT
TCCATCTTCATCGATGTATTCGTCATTCATTTCTTGACAAATATTGTGTA
AAACGCAGCAAGCGATAATCTGATCAGAAACATTTTCGACTTCAGCGTCA
AGGCGCGTTAGTAAACATCTCCACCGAGCCTTTAAAATACCAAATCCCCT
TTCCACCGTGACTCTAGCAGAGCTGAGTATTTTGTTAAACCGTTTTTCTG
ACCTCGTTAAAGCGGGAATAAAAGGATAGGGTTTGACTAGCCATGGAACC
AGAGGGTAAGCTCCATCTCCCAGTAAAAGTGGTCGTATAGTGTTGTTATC
AATCCGTTTAGTAGGATCAGTTAGAATTTCCAAGCGTTCTGCTTTTCGAA
ATAGCGACGTATGAGCTAACACTCGGGCGTCATGTATACTCCCTGGGAAC
CCAGTTGCGACATCTAGGATCTTTAGATTTCCACCAACAACTGCTTGAGT
GTTGATTGTATAGCATTGCTTACGGCTGTAGTAATCTCCCTTATGTTCGC
TTGCTGGTGCAGTTATTTTGATATGCGTTCCATCAATTGCCCCTACCACT
TGTGGAATTTTACAGTTTGTTTCCTCTTTGAATCGTCCTATTTCTTCTCT
AGTTTCATCTCTTGTAACTGGGAAATGGATAACCTGACCCGAAATCCTCG
AAAGTTCCTTGTAAAAATCCCTCGTAATTGAAACAGCAGTAGACTTTGCA
ACACCAAAAGTTTTTCCGACTGTTCTATATGCATTTCCCGTCGCTAACCT
CCATAATCCAATCGCAATCCTTTTTTCAATCGGTACAGCCCTGCGAAGTT
GCGTGTCTTGCTTTGCTAACCTTGGACTCATCAATCTTACAAGCATTTCA
AAAGTTTCCTTTTTGATTCGGAAATCTTGTCGCCATTGGCTATGACGGAC
ATTATTATCAATTTCATCTCTTCTATCCCATAGATCAGTAAACCAAAATT
CGTGTCTTTCAAGGGCCCAAATCTTTCGCTCGTTGCGAGCCAGAAACGGG
CGGTTCATCATCAAAGCTAATCTCTTCATTCGTTTGTAATGCAGCATATT
AAGAAGTGTAAAAGTACGAAATCGTTTGATTCGTTCCCATTTTTTgcgaa
gaaaatgtttgaaaattatgaaaattaataaacgtcTTGCGCTCATGTTT
ACGTCCCTTTAATGATTAGACTGCTtgatttttctcttttgaaCTTTGCC
GAAAATTGAGTTTTAAATTTAAAGTCAGACAGCGTTAAATTTGTCTAGTC
TGACCGCACTGTAATAGATTAAGTTATTCGATTAACACTTATTAACAGTT
ATTTTGTTTGACTTCTCGGAGAAGGGGGCTTTAAATTTGTATGCGATAAT
GCCTCGttcttttcttataaagaaaaccaaTTTACGTTTTTCTTCGGTGA
CTTGTACAGACAAACGCGGCACAATTTTACCACTTGACGATCTGGAACAG
AAAGAAGTATTTATAACAGAAAAAGAGCAACGCCTCATTGAGGAGGACGA
AGATGAAAAGTCTTATTCAACTATCTCGATGTGTCGAACGCCTATCCCGC
cctattatttgaaaaaaatcgagGAGGGTGGAgaagaacaaaaagaaagg
ATGGAAGACAAGCATAACGTTCGAGCGTCCGAACAAGGTCGCCCGTCACC
CGACTCACCACATTCCAGACACTTTCCGCCACCGCAAGAATACACATTTC
TTCCGATCAAACATATGGGCCACCGTGATCATGAAGTCCCATCTCGATAT
GGCTCGAGAACACCAGAATATTTCCTACCGCCAAACAATGGACCAATTAG
CCACCACTCTTATGATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCC
CCGAAGCCATCAATAACAAACATCATAAAATTCCTATCCGtcatttatat
tttaaaaacccGCCACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCT
TGTTGAATCACCCAATTCACAGATAGGATTTTGGCGACAATTACATCCTT
TAAACTACAGCCATCAGCCATCAATGGATATTGAAAATCCAACCAAAGTG
AAATCACAAGACGGAGACAGATACGGCTGCTCACAATGCGATAAAGCTTT
TAACACCGTACACGGGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTA
AGGTGCGGCCCCATCGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAA
ATCAGCTTAGAGCAACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTT
CGATTGTACCGAATGCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAA
CTCACATGCTTATCCACAGTAACACTCGCCCTTATTCTTGCGGTTATTGC
GGAAAACGATTTCACCAGAAATCGGATATGAAAAAACATACCTACGTTCA
TACGGGGGAACGTCCTTACAAATGTGGAGCTTGTAATAAATCATTCAGTC
AATCTTCAAACTTGATCACTCACATGCGAAAGCATAGTGGTTTTAAACCA
TTTCATTGTGATTTATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACG
ACGCCACTTGTTCATTCATCATAAAGACTTTATTGTCAGTAGAAATGCTA
CTGGAATAGTAGGCAACGAAAAACTTGTTCGATAGGGGAACTTATTTCGC
AAAGAATCAATTTGCCGAATTTCGCCAGAAATAATAAATTACCGACTCGT
CCAAATATGTTCCTCTCTAATTTTGAATattgttaagattatttctcgtT
ATATTTTCTCGGAGGGGGGAGGTTGGGAGTGGGCTATTTGAGGAAAGTTG
ATGAaccttaaaatcttaaaagtaACGAGTAACTTATTATATGATAATTT
AATACGGATAAAAAACATACTCTGCTATTTATGGAATTTGGGAATTTTTT
AACTAAAATGTATCATCGTGCAAGGGAATCCCCAAAAAACTCTGAAATAA
ATATAATGAAGTactaaaggtttttttttggtaatGGGGAAATTgggaat
ttagaaaaaataagaactcTTTCATTTTTGTATGAAATTATTTG Run BLAST on NCBI protein sequence of TCONS_00021140-protein >TCONS_00021140-protein ID=TCONS_00021140-protein|Name=TCONS_00021140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
MPRSFLIKKTNLRFSSVTCTDKRGTILPLDDLEQKEVFITEKEQRLIEED
EDEKSYSTISMCRTPIPPYYLKKIEEGGEEQKERMEDKHNVRASEQGRPS
PDSPHSRHFPPPQEYTFLPIKHMGHRDHEVPSRYGSRTPEYFLPPNNGPI
SHHSYDRFASYFPSPHSPEAINNKHHKIPIRHLYFKNPPPRWSPNEYDGR
LVESPNSQIGFWRQLHPLNYSHQPSMDIENPTKVKSQDGDRYGCSQCDKA
FNTVHGLEVHVRRSHAGKVRPHRCDLCGKTFGHKISLEQHKETIHSAFRS
FDCTECGKSFKRSSTLSTHMLIHSNTRPYSCGYCGKRFHQKSDMKKHTYV
HTGERPYKCGACNKSFSQSSNLITHMRKHSGFKPFHCDLCSREFYRKVDL
RRHLFIHHKDFIVSRNATGIVGNEKLVR Run BLAST on NCBI transcript from alignment at sc0000378:273296..279332- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021140 ID=TCONS_00021140|Name=TCONS_00021140|organism=Clytia hemisphaerica|type=transcript|length=6037bp|location=Sequence derived from alignment at sc0000378:273296..279332- (Clytia hemisphaerica)
GTCGAAAACAAGAAACCTGACGGAAATGAAAACAAGAACAAACGAAAATT
GACTGATTTAAATGATTCAAAAAAGAATAAGAAGAAAAAAACATTCCACG
AAGAACTACTTGATGTTCAGAGAGAACAAATTGATTTTTTCAAATCTTCC
GAACAAAACTACACAAAATTCATGAGAGAGTTGGTGGAAAACCAACAAAA
ACATGACGCAGAAGAAAAAAAACGCGATAGAGATTTTTTCTTACAGTTAG
GAAACATTTTATCTGGTGGTCCTGGTGGTCAAAATCAAAAGTGAAAATAT
TTTGGTAACACTTGTCTTATGTTTTTTTTCTAGAAAATTTAAAAGTTGAA
ACATTATACTGTTTTTAACGGTTTTTAGTTAATATTTTAACATTTCACTC
TCATTGAACACTACATGAAAAGTACTACTCGTTTTGTTCTAAATATATTT
TCAATATTGTTCTTGTTTCTTCTCCCAGCGGATAAATGTCTTGGTTAACT
CGTCGTTGTTGCCTTGCTCGCCTCTCGTTTCTCAGTATGTTATCTAACAT
TCCATCTTCATCGATGTATTCGTCATTCATTTCTTGACAAATATTGTGTA
AAACGCAGCAAGCGATAATCTGATCAGAAACATTTTCGACTTCAGCGTCA
AGGCGCGTTAGTAAACATCTCCACCGAGCCTTTAAAATACCAAATCCCCT
TTCCACCGTGACTCTAGCAGAGCTGAGTATTTTGTTAAACCGTTTTTCTG
ACCTCGTTAAAGCGGGAATAAAAGGATAGGGTTTGACTAGCCATGGAACC
AGAGGGTAAGCTCCATCTCCCAGTAAAAGTGGTCGTATAGTGTTGTTATC
AATCCGTTTAGTAGGATCAGTTAGAATTTCCAAGCGTTCTGCTTTTCGAA
ATAGCGACGTATGAGCTAACACTCGGGCGTCATGTATACTCCCTGGGAAC
CCAGTTGCGACATCTAGGATCTTTAGATTTCCACCAACAACTGCTTGAGT
GTTGATTGTATAGCATTGCTTACGGCTGTAGTAATCTCCCTTATGTTCGC
TTGCTGGTGCAGTTATTTTGATATGCGTTCCATCAATTGCCCCTACCACT
TGTGGAATTTTACAGTTTGTTTCCTCTTTGAATCGTCCTATTTCTTCTCT
AGTTTCATCTCTTGTAACTGGGAAATGGATAACCTGACCCGAAATCCTCG
AAAGTTCCTTGTAAAAATCCCTCGTAATTGAAACAGCAGTAGACTTTGCA
ACACCAAAAGTTTTTCCGACTGTTCTATATGCATTTCCCGTCGCTAACCT
CCATAATCCAATCGCAATCCTTTTTTCAATCGGTACAGCCCTGCGAAGTT
GCGTGTCTTGCTTTGCTAACCTTGGACTCATCAATCTTACAAGCATTTCA
AAAGTTTCCTTTTTGATTCGGAAATCTTGTCGCCATTGGCTATGACGGAC
ATTATTATCAATTTCATCTCTTCTATCCCATAGATCAGTAAACCAAAATT
CGTGTCTTTCAAGGGCCCAAATCTTTCGCTCGTTGCGAGCCAGAAACGGG
CGGTTCATCATCAAAGCTAATCTCTTCATTCGTTTGTAATGCAGCATATT
AAGAAGTGTAAAAGTACGAAATCGTTTGATTCGTTCCCATTTTTTGCGAA
GAAAATGTTTGAAAATTATGAAAATTAATAAACGTCTTGCGCTCATGTTT
ACGTCCCTTTAATGATTAGACTGCTTGATTTTTCTCTTTTGAACTTTGCC
GAAAATTGAGTTTTAAATTTAAAGTCAGACAGCGTTAAATTTGTCTAGTC
TGACCGCACTGTAATAGATTAAGTTATTCGATTAACACTTATTAACAGTT
ATTTTGTTTGACTTCTCGGAGAAGGGGGCTTTAAATTTGTATGCGATAAT
GCCTCGTTCTTTTCTTATAAAGAAAACCAATTTACGTTTTTCTTCGGTGA
CTTGTACAGACAAACGCGGCACAATTTTACCACTTGACGATCTGGAACAG
AAAGAAGTATTTATAACAGGTAAGCGGAAATTTGTTAAGCGGGATAGGGG
GACTAATCACGCCTTTAAACTGAAACACTCGGCCAAACTATTGTGGAGCC
CTAGAAGGAACTTGCAAAAATATTTCCCCAAATATATATATAGATGAGAT
TAGTAAGTTGAATGAATGAATTGATTGGTTTCAAAAGAATTTCTCGGAAG
ATAGAATTTATCGTCTATTTTCGTTTCTTCCAGAAAAAGAGCAACGCCTC
ATTGAGGAGGACGAAGATGAAAAGTCTTATTCAACTATCTCGATGTGTCG
AACGCCTATCCCGCCCTATTATTTGAAAAAAATCGAGGAGGGTGGAGAAG
AACAAAAAGAAAGGATGGAAGACAAGCATAACGTTCGAGCGTCCGAACAA
GGTCGCCCGTCACCCGACTCACCACATTCCAGACACTTTCCGCCACCGCA
AGAATACACATTTCTTCCGATCAAACATATGGGCCACCGTGATCATGAAG
TCCCATCTCGATATGGTGAGTCTATGTTTCTGACCGCATTCTTCATGACC
CCCGGAATCGAATTAAGGGGGCCATAAAGATATGTCGCCAACCATGGTTG
GGCGACGAAGAAAATTTTCGACTTTTCACCCTTTTCACCCCCGGTGACGG
GGGACATGATCTTGCTGTCTTTTTACTAAAATTTATTAAGGTTGTATTTA
TAGTATGCCATATTGGAAAAAAAAGATTTCAAATCTATTCTTTAGCCGTG
CAGTAAATTTTCTCACCAAATTGTACACTGTTTTGTTCAAGATATGCAAA
AATATATTTTCCTGAAGATGTTTATCTCAAAAAATGTTGAAATGGATTTT
AAGATTTTCACATCTGGTACCTTTAAGATGACATTAAACTGAAATCATTT
TCTTGATTTTTGGCATAGATAAAGTTAACAGAACTTTGGATTAAAGTTTT
CAAATTTGAAAGGAAAAAATAGATTGTGGAATGACGAATGAAGTAAAATT
TTGAGTACTTTAAGGAATTAAGTCCTGTCATAAAATATGGCAAAGTAAAT
ATTTTTTGCAAAATTTAAGTTCTTTTTTTAGTTTCTGTGGTTTCATTTTT
TTTTTTTTTCTGCAGAGAAGCGATAATTTACCCTACGATTTTGGTATTTT
TGCATTTCTATCCTTTTGAATTTGTGAAATTACTACAAATGTGAGAAAGT
ATGACCATTCACAATACAATGAAATTAGATTTTTCGGGTACTGTGCTGTT
CTTCGTAGTTTCTGCGGAAAAACTTTAATTCAAAAATCGGCGAAATTATT
TTTGCATGCATTTTTTTCTTTTTTTTCGGACACACTGTATAGTATAGAAA
TCAAATGTGATTAAATTTCATTTCATTTTAATTTTCTAAAAAAAAGTAAA
TCTCCTTTTGACAAATTTCTGTTGTAAATCTTGTCTTATAACTTTTTGAT
TTTCACAGTTAGTTACAGCTAAGATCCGGTTCCCCTTTTCTTGTGAGATT
TTATGATCTTTTTCTCCTCAGTTGGCCACTTTTTGCAACTACACGCTTTT
CATTATCTTTTTATAAGAATGGTGTAAATCCGCTTCATCAGGAATATTCT
TAACTTTTTTGGGAAGATCATCCTAAAATATTCTTACAGTATTCTTTAGG
TTAGGATCCTAATTCAGGCTAGACTTAAAATACTAATGTACTACATATGT
ACTAAATACATAGGTCTCAAGCATAAAATCGCATTTTTGTGAAAGGGGTG
AAAATGCTCTAAAAATGGCATTCTTTTAAGCTTGAGTAGCAAAATTCCAT
GATGGTGATATTCTTAATTTTTTGGCCATTTTCATCATGGACATTCTTAT
AAAGTGTATTTTTATAAAAAAAGCGTGTAGTTGAAATAGTATTCCTTTTC
TAGATAACACTCCGTCTAAGAAGTCGTTTTTTATTTGAAGGATTTCTTTC
ATTTAGAAATAGAATTATAAATCACCATGAAATACCTACAAGAGGTCAAA
CCTGTGCAAAGAAAAACAAAACAATAAAATGAAACGAAATTAAAAGACAA
TGAAAATACAATTTGATCATATACAATTTTTTTCCCGATTCTTCAAAAAC
GGGGTACTTTGAAATCGAAGAGAGAAAATATGAACCTTTTTTCCCCTGAA
ATTTTTATTATTTACTCAGATCTCAGCAGGGTTGACATGGATTCCTTACT
ATCAAACCTGCACTTTATTAAACCTATTTCTTTTACTTTTTCCATTTGCG
AAAAACTTATTTTTCACAGTTGATAGAGATTTTGTAAAAAACCGATTGCA
TTTTTTTATTTCAAATGATTTTCTTGATAACCTCGCAATGACACCTTGTT
TCCTTCCCATGAACCTTGCTAGGGTAACGGAAGCATTTACTTTACGAAGA
TCATCTCCCGCTCAAAAATAAACTGGGAGCCAGTTTTCTCTATATGCCCC
AAGACCTTGTTAGCTTTAATTTCTTTGAATGGCGGCTTTTAACTCTCTAA
AGTGGGCCTAGTATGGAAACATTGGAAGGCTGTAAATAGGGGATGTTCTG
TTTTAAGATAATTATCTATGCGTGACTGAGTAGTCAAAACAGAGTTTCTG
CATTCGATCAAAAATATATATTTAATTATTTTCATAAGGTGTAGCTTCGA
CTATCACTCAGATCTATAACATTCCTCCGTGTGCAGCTAGCTGTTAGCCC
ATTCATAGAACTATAAAGTCATTTCTATTTATCTTTCAATCCAGGCTCGA
GAACACCAGAATATTTCCTACCGCCAAACAATGGACCAATTAGCCACCAC
TCTTATGATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCCCCGAAGC
CATCAATAACAAACATCATAAAATTCCTATCCGTCATTTATATTTTAAAA
ACCCGCCACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCTTGTTGAA
TCACCCAATTCACAGATAGGATTTTGGCGACAATTACATCCTTTAAACTA
CAGCCATCAGCCATCAATGGATATTGAAAATCCAACCAAAGTGAAATCAC
AAGACGGAGACAGATACGGCTGCTCACAATGCGATAAAGCTTTTAACACC
GTACACGGGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTAAGGTGCG
GCCCCATCGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAAATCAGCT
TAGAGCAACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTTCGATTGT
ACCGAATGCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAACTCACAT
GCTTATCCACAGTAACACTCGCCCTTATTCTTGCGGTTATTGCGGAAAAC
GATTTCACCAGAAATCGGATATGAAAAAACATACCTACGTTCATACGGGG
GAACGTCCTTACAAATGTGGAGCTTGTAATAAATCATTCAGTCAATCTTC
AAACTTGATCACTCACATGCGAAAGCATAGTGGTTTTAAACCATTTCATT
GTGATTTATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACGACGCCAC
TTGTTCATTCATCATAAAGACTTTATTGTCAGTAGAAATGCTACTGGAAT
AGTAGGCAACGAAAAACTTGTTCGATAGGGGAACTTATTTCGCAAAGAAT
CAATTTGCCGAATTTCGCCAGAAATAATAAATTACCGACTCGTCCAAATA
TGTTCCTCTCTAATTTTGAATATTGTTAAGATTATTTCTCGTTATATTTT
CTCGGAGGGGGGAGGTTGGGAGTGGGCTATTTGAGGAAAGTTGATGAACC
TTAAAATCTTAAAAGTAACGAGTAACTTATTATATGATAATTTAATACGG
ATAAAAAACATACTCTGCTATTTATGGAATTTGGGAATTTTTTAACTAAA
ATGTATCATCGTGCAAGGGAATCCCCAAAAAACTCTGAAATAAATATAAT
GAAGTACTAAAGGTTTTTTTTTGGTAATGGGGAAATTGGGAATTTAGAAA
AAATAAGAACTCTTTCATTTTTGTATGAAATTATTTG Coding sequence (CDS) from alignment at sc0000378:273296..279332- >TCONS_00021140 ID=TCONS_00021140|Name=TCONS_00021140|organism=Clytia hemisphaerica|type=CDS|length=3861bp|location=Sequence derived from alignment at sc0000378:273296..279332- (Clytia hemisphaerica)
GCTCGAGAACACCAGAATATTTCCTACCGCCAAACAATGGACCAATTAGC
CACCACTCTTATGATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCCC
CGAAGCCATCAATAACAAACATCATAAAATTCCTATCCGTCATTTATATT
TTAAAAACCCGCCACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCTT
GTTGAATCACCCAATTCACAGATAGGATTTTGGCGACAATTACATCCTTT
AAACTACAGCCATCAGCCATCAATGGATATTGAAAATCCAACCAAAGTGA
AATCACAAGACGGAGACAGATACGGCTGCTCACAATGCGATAAAGCTTTT
AACACCGTACACGGGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTAA
GGTGCGGCCCCATCGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAAA
TCAGCTTAGAGCAACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTTC
GATTGTACCGAATGCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAAC
TCACATGCTTATCCACAGTAACACTCGCCCTTATTCTTGCGGTTATTGCG
GAAAACGATTTCACCAGAAATCGGATATGAAAAAACATACCTACGTTCAT
ACGGGGGAACGTCCTTACAAATGTGGAGCTTGTAATAAATCATTCAGTCA
ATCTTCAAACTTGATCACTCACATGCGAAAGCATAGTGGTTTTAAACCAT
TTCATTGTGATTTATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACGA
CGCCACTTGTTCATTCATCATAAAGACTTTATTGTCAGTAGAAATGCTAC
TGGAATAGTAGGCAACGAAAAACTTGTTCGATAGAAAAAGAGCAACGCCT
CATTGAGGAGGACGAAGATGAAAAGTCTTATTCAACTATCTCGATGTGTC
GAACGCCTATCCCGCCCTATTATTTGAAAAAAATCGAGGAGGGTGGAGAA
GAACAAAAAGAAAGGATGGAAGACAAGCATAACGTTCGAGCGTCCGAACA
AGGTCGCCCGTCACCCGACTCACCACATTCCAGACACTTTCCGCCACCGC
AAGAATACACATTTCTTCCGATCAAACATATGGGCCACCGTGATCATGAA
GTCCCATCTCGATATGATGCCTCGTTCTTTTCTTATAAAGAAAACCAATT
TACGTTTTTCTTCGGTGACTTGTACAGACAAACGCGGCACAATTTTACCA
CTTGACGATCTGGAACAGAAAGAAGTATTTATAACAGGCTCGAGAACACC
AGAATATTTCCTACCGCCAAACAATGGACCAATTAGCCACCACTCTTATG
ATCGATTCGCCTCTTATTTCCCATCGCCGCACAGCCCCGAAGCCATCAAT
AACAAACATCATAAAATTCCTATCCGTCATTTATATTTTAAAAACCCGCC
ACCGCGCTGGAGCCCTAATGAATATGATGGCCGCCTTGTTGAATCACCCA
ATTCACAGATAGGATTTTGGCGACAATTACATCCTTTAAACTACAGCCAT
CAGCCATCAATGGATATTGAAAATCCAACCAAAGTGAAATCACAAGACGG
AGACAGATACGGCTGCTCACAATGCGATAAAGCTTTTAACACCGTACACG
GGCTAGAAGTTCACGTTCGGCGCTCACACGCCGGTAAGGTGCGGCCCCAT
CGTTGCGACTTATGCGGGAAAACGTTCGGTCATAAAATCAGCTTAGAGCA
ACACAAGGAGACAATTCATTCTGCTTTCCGTAGTTTCGATTGTACCGAAT
GCGGGAAATCATTCAAGCGCTCTTCAACGCTTTCAACTCACATGCTTATC
CACAGTAACACTCGCCCTTATTCTTGCGGTTATTGCGGAAAACGATTTCA
CCAGAAATCGGATATGAAAAAACATACCTACGTTCATACGGGGGAACGTC
CTTACAAATGTGGAGCTTGTAATAAATCATTCAGTCAATCTTCAAACTTG
ATCACTCACATGCGAAAGCATAGTGGTTTTAAACCATTTCATTGTGATTT
ATGCTCAAGAGAATTTTACAGGAAAGTTGATCTACGACGCCACTTGTTCA
TTCATCATAAAGACTTTATTGTCAGTAGAAATGCTACTGGAATAGTAGGC
AACGAAAAACTTGTTCGATAGAAAAAGAGCAACGCCTCATTGAGGAGGAC
GAAGATGAAAAGTCTTATTCAACTATCTCGATGTGTCGAACGCCTATCCC
GCCCTATTATTTGAAAAAAATCGAGGAGGGTGGAGAAGAACAAAAAGAAA
GGATGGAAGACAAGCATAACGTTCGAGCGTCCGAACAAGGTCGCCCGTCA
CCCGACTCACCACATTCCAGACACTTTCCGCCACCGCAAGAATACACATT
TCTTCCGATCAAACATATGGGCCACCGTGATCATGAAGTCCCATCTCGAT
ATGATGCCTCGTTCTTTTCTTATAAAGAAAACCAATTTACGTTTTTCTTC
GGTGACTTGTACAGACAAACGCGGCACAATTTTACCACTTGACGATCTGG
AACAGAAAGAAGTATTTATAACAGGCTCGAGAACACCAGAATATTTCCTA
CCGCCAAACAATGGACCAATTAGCCACCACTCTTATGATCGATTCGCCTC
TTATTTCCCATCGCCGCACAGCCCCGAAGCCATCAATAACAAACATCATA
AAATTCCTATCCGTCATTTATATTTTAAAAACCCGCCACCGCGCTGGAGC
CCTAATGAATATGATGGCCGCCTTGTTGAATCACCCAATTCACAGATAGG
ATTTTGGCGACAATTACATCCTTTAAACTACAGCCATCAGCCATCAATGG
ATATTGAAAATCCAACCAAAGTGAAATCACAAGACGGAGACAGATACGGC
TGCTCACAATGCGATAAAGCTTTTAACACCGTACACGGGCTAGAAGTTCA
CGTTCGGCGCTCACACGCCGGTAAGGTGCGGCCCCATCGTTGCGACTTAT
GCGGGAAAACGTTCGGTCATAAAATCAGCTTAGAGCAACACAAGGAGACA
ATTCATTCTGCTTTCCGTAGTTTCGATTGTACCGAATGCGGGAAATCATT
CAAGCGCTCTTCAACGCTTTCAACTCACATGCTTATCCACAGTAACACTC
GCCCTTATTCTTGCGGTTATTGCGGAAAACGATTTCACCAGAAATCGGAT
ATGAAAAAACATACCTACGTTCATACGGGGGAACGTCCTTACAAATGTGG
AGCTTGTAATAAATCATTCAGTCAATCTTCAAACTTGATCACTCACATGC
GAAAGCATAGTGGTTTTAAACCATTTCATTGTGATTTATGCTCAAGAGAA
TTTTACAGGAAAGTTGATCTACGACGCCACTTGTTCATTCATCATAAAGA
CTTTATTGTCAGTAGAAATGCTACTGGAATAGTAGGCAACGAAAAACTTG
TTCGATAGAAAAAGAGCAACGCCTCATTGAGGAGGACGAAGATGAAAAGT
CTTATTCAACTATCTCGATGTGTCGAACGCCTATCCCGCCCTATTATTTG
AAAAAAATCGAGGAGGGTGGAGAAGAACAAAAAGAAAGGATGGAAGACAA
GCATAACGTTCGAGCGTCCGAACAAGGTCGCCCGTCACCCGACTCACCAC
ATTCCAGACACTTTCCGCCACCGCAAGAATACACATTTCTTCCGATCAAA
CATATGGGCCACCGTGATCATGAAGTCCCATCTCGATATGATGCCTCGTT
CTTTTCTTATAAAGAAAACCAATTTACGTTTTTCTTCGGTGACTTGTACA
GACAAACGCGGCACAATTTTACCACTTGACGATCTGGAACAGAAAGAAGT
ATTTATAACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021140-exon-sc0000378-1575043694:277314..279332 | TCONS_00021140-exon-sc0000378-1575043694:277314..279332 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1575043694:276818..277099 | TCONS_00021140-exon-sc0000378-1575043694:276818..277099 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1575043694:273296..274588 | TCONS_00021140-exon-sc0000378-1575043694:273296..274588 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1510915933:277314..279332 | TCONS_00021140-exon-sc0000378-1510915933:277314..279332 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1510915933:276818..277099 | TCONS_00021140-exon-sc0000378-1510915933:276818..277099 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1510915933:273296..274588 | TCONS_00021140-exon-sc0000378-1510915933:273296..274588 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1491911889:277314..279332 | TCONS_00021140-exon-sc0000378-1491911889:277314..279332 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1491911889:276818..277099 | TCONS_00021140-exon-sc0000378-1491911889:276818..277099 | Clytia hemisphaerica | exon |
| TCONS_00021140-exon-sc0000378-1491911889:273296..274588 | TCONS_00021140-exon-sc0000378-1491911889:273296..274588 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000378 | supercontig | sc0000378:273296..279332 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR013087 | Znf_C2H2_type |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003676 |
nucleic acid binding |
Blast
BLAST of TCONS_00021140 vs. Swiss-Prot (Human)
Match: GFI1B (Zinc finger protein Gfi-1b OS=Homo sapiens GN=GFI1B PE=1 SV=1) HSP 1 Score: 252.677 bits (644), Expect = 1.002e-74 Identity = 129/213 (60.56%), Postives = 156/213 (73.24%), Query Frame = 3
Query: 2469 RWSPNEYDGRLVESPNSQIGFWRQLHPLNYSHQPSMDIENPTKVKSQDGDRYGCSQCDKAFNTVHGLEVHVRRSHAGKVRPHRCDLCGKTFGHKISLEQHKETIHSAFRSFDCTECGKSFKRSSTLSTHMLIHSNTRPYSCGYCGKRFHQKSDMKKHTYVHTGERPYKCGACNKSFSQSSNLITHMRKHSGFKPFHCDLCSREFYRKVDLRRH 3107
R +P+ +E S G PL S +P++D + S D Y C +C+K F+T HGLEVHVRRSH+G RP CD+CGKTFGH +SLEQH +HS RSF+C CGK+FKRSSTLSTH+LIHS+TRPY C +CGKRFHQKSDMKKHTY+HTGE+P+KC C K+FSQSSNLITH RKH+GFKPF C+LC++ F RKVDLRRH
Sbjct: 120 RQAPSTMQSAFLEHSVSLYG-----SPLVPSTEPALDF---SLRYSPGMDAYHCVKCNKVFSTPHGLEVHVRRSHSG-TRPFACDICGKTFGHAVSLEQHTH-VHSQERSFECRMCGKAFKRSSTLSTHLLIHSDTRPYPCQFCGKRFHQKSDMKKHTYIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFSCELCTKGFQRKVDLRRH 322
The following BLAST results are available for this feature:
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