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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00022092 ID=TCONS_00022092|Name=TCONS_00022092|organism=Clytia hemisphaerica|type=transcript|length=2948bp
CTTAAATTGAGCAGGAAGCCGGGGCCAAAACTAAACACCCAGAAAGTGTT
GACACATTTATTCATTCAAACTTCTTGATATACTTGTTAAAACTCTTGTA
CTAAAACCTTTGAGGGTTTGGATTTTGATcagttttttgcttgaaaagtt
GTTCTTCGACCTTTCCGCTTGGTAAAATACTCAAAATGTCCAGGTGgggt
aaaaaacaaaaacttccaGAGGTTTTCAACTCTGTGGCTGAAGGCCTGCA
GAAACTTTACAAGGAGAAATTACTTCCCCTTGAAGAAGCCTATAAATTCC
ATGAATTTCACTCACCCAAACTTGAAGACAGTGATTTCTTTGCAAAGCCT
ATGGTACTTTTGGTTGGTCAATATTCTACTGGTAAAACAACCTTTATCAA
ATATTTACTTGAGCAAGATTTCCCAGGAATCAGAGTCGGCCCTGAACCCA
CAACTGATACCTTCACATGTGTTATGCACGGTAATCATGATCGTGTTGTT
CCTGGAAATGCACTTGTTGTAGATTCATCAAAATCCTTCAGATCACTGTC
CGCCTTTGGTAATGCTTTCTTGAACAGATTTGCCTGTTCAGAAACTGCAA
ATCCTGTTTTGGAAACAATTACCCTTGTGGATTCCCCTGGTATCCTTTCT
GGTGAAAAACAATCAATTAACAGAGGGTATGATTTCACAGGAGTACTTGA
ATGGTTTGCTGAGCGTGTAGATagaattattttgttatttgatGCCCATA
AACTAGACATTTCTGACGAATTCAGACGGGGTATTGAAGCTCTTCATGGA
TTTGATGACAAAATCcgtattgttttgaataaagcTGATATGATTTCCAC
TCAGCAGCTGATGAGAGTTTATGGAGCTATGATGTGGTCTTTAGGAAAGG
TCATCAATACACCTGAAGTAACAAGAGTCTATGTAGGATCATTTTGGGAT
CAACCATTGAAAATGGACGATAATAGGAAACTTTTTGAATTAGAGGAAAC
AGATTTGTTTGCTGATTTACAAGGATTGCCAAAGAATGCTGCACTACGAA
AATTGAATGATCTGATCAGAAGAGCAAGGTTGGCCAAGGTGCACGCCTAC
ATCATGACTGCATTGAAAGACGATATGCCATCCGTCTTCGGTAAAGACAA
GAAGAAAGCTGAACTCATCAAAAACCTAGGAGATACTTTCCGTCGTATCC
AAATGCAACACGAAATCTCACCTGGAGATTTCCCAAACCTCCAACGTATG
CAAGAAAACTTGCAATATCATGATTTCTCCAAATTCGCACCATTGAAACC
GAAATTGATCGAGAAAGTTGATCAGATGTTGAATACAGATATTGCTCGTT
TAATGGCAATGTTACCTCAAGAATTCACTGACCGTGAAGACGAGCAAACT
GTCAAAGGAGGTGTTTTCGCCAGCGCTCAAGGTGATTTCAACCCGTTTGC
TGAGGGTGCAGCAGAAGGATTCAATCTGGGTGCAGGATCATCAGCGTGGG
TCGTCGAAAGTACCAATTCAAAAGAGAAATACGACAGAATGTTTTTGGAT
TTGGGTCCAGTAGACGGGAAGCTATCCGGCGCTTCTGCTAAGAAGGAAAT
GGTCAAATCGAAATTGCCAAAGAACGCGTTAGCCAAGATTTGGACTTTGT
CAGATATTGACAAAGATGGACAGCTGGATGAAGAAGAGTTCGCATTAGCC
ATGTACTTGATTGACACCAAGTTAGGAGGTAGTGATGACATCCCAACTGT
ACTACCAGAGCATTTAGTACCGCCAGGCAAACGAAAGCTGTTGTTCGGTA
ACTAGGACACTTTCTGGTGGACTTACATTTAGATGACTTTCAATTAGAAG
TATTATTACAGTATTATAGTGACACTTTACAGATTCTTTTAGAAcactta
aaaaaacaacattggaaaattatttttttataaaggattaattatttcat
tttttttcttctttgttttgtttcgtttttttttgtacaatttttttgtc
cTTTCCAATCATTGATTTAAACTCTGAACCCATTTTCGAAGAAATTTCTG
ATATTTGATAAACAGAAAAACAAAGCAAGCAGTATGCGCCTCATCTACAG
GGGACAGAACTAGTAAGAACTTCACAAAGACTTCCGGGGTGTTGGGTAAA
AGGGTCCAGCGTTTATCAACGTCCAGTGTTTTCTCCACATTTTCTTGTTT
ATAGCTCCGTTTGAacgtttttttatgttttgttttttttgttcttcatc
ttctttttgacgtttagTTACTGTTCTTAAACTGTTCTTATCATTTCTTT
ATTGAAAACTTCTTTGAACACGGTTGGGAATTTATACGCTATGGttccat
agtcattataaaaaactcCGTTCTGgaaatgtattgttttagctttttgt
tcaattttcttttgttacaaacaaaagacaagttgcgatttCCATACTTT
Tgtatcacgttaccaaaatctcctcttgggattggtctattttttaatca
catgatcaaaaagtttgcaaaataaatcgattttggtacgtaagctccat
cttttaacaataaaaagagacaaaagccttccagaccagtgtttttataa
tgactatgatggTTCATAAAATCGATTATAAAGATGAGATTTTTAGTCTT
ACTTAACTCCCTTTGGATACGTCCTGAAACTATTAATTAACATTGCGCCT
GTATTTAACTTAAAAAACAATCTTAACTACAAaactattatttttaaaat
tattctttaGTAGAAAGAGATTTGTCTGTCAATTGCATTTTTTTGCGGAA
ATTTctcatttattttgaatttccatTTTATCGAAACGATAATTTTTTGA
CAGATCTTTTTCATTAATTTGACACATTTTGCAAGTTCTAATTTTTAGTT
TTGCAGGGAAATGTACTTAATAGAATgaagaaattaaattaaaaacag Run BLAST on NCBI protein sequence of TCONS_00022092-protein >TCONS_00022092-protein ID=TCONS_00022092-protein|Name=TCONS_00022092-protein|organism=Clytia hemisphaerica|type=polypeptide|length=539bp
MSRWGKKQKLPEVFNSVAEGLQKLYKEKLLPLEEAYKFHEFHSPKLEDSD
FFAKPMVLLVGQYSTGKTTFIKYLLEQDFPGIRVGPEPTTDTFTCVMHGN
HDRVVPGNALVVDSSKSFRSLSAFGNAFLNRFACSETANPVLETITLVDS
PGILSGEKQSINRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRGI
EALHGFDDKIRIVLNKADMISTQQLMRVYGAMMWSLGKVINTPEVTRVYV
GSFWDQPLKMDDNRKLFELEETDLFADLQGLPKNAALRKLNDLIRRARLA
KVHAYIMTALKDDMPSVFGKDKKKAELIKNLGDTFRRIQMQHEISPGDFP
NLQRMQENLQYHDFSKFAPLKPKLIEKVDQMLNTDIARLMAMLPQEFTDR
EDEQTVKGGVFASAQGDFNPFAEGAAEGFNLGAGSSAWVVESTNSKEKYD
RMFLDLGPVDGKLSGASAKKEMVKSKLPKNALAKIWTLSDIDKDGQLDEE
EFALAMYLIDTKLGGSDDIPTVLPEHLVPPGKRKLLFGN Run BLAST on NCBI transcript from alignment at sc0000405:29711..37395+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00022092 ID=TCONS_00022092|Name=TCONS_00022092|organism=Clytia hemisphaerica|type=transcript|length=7685bp|location=Sequence derived from alignment at sc0000405:29711..37395+ (Clytia hemisphaerica)
CTTAAATTGAGCAGGAAGCCGGGGCCAAAACTAAACACCCAGAAAGTGTT
GACACATTTATTCATTCAAACTTCTTGATATACTTGTTAAAACTCTTGTA
CTAAAACCTTTGAGGGTTTGGATTTTGATcagttttttgcttgaaaagtt
GTTCTTCGACCTTTCCGCTTGGTAAGCGCTCGATTTCACATTATTTCGAT
CGAGAGAAGACTTCGCGTTACCGCCCTATTCAAGATTTACAGAGACAGTC
AAAATGGATGAATTGTTTTGGTAATTGTATGGCTAATACGGTTAATTCAA
CGTAATTGTCTTATGAGGTTTAGTATCtccttttttcatattttattaGT
ACTTATTTTATCTTAATCTGTCTATTTTCTAGGTAAAATACTCAAAATGT
CCAGGTGgggtaaaaaacaaaaacttccaGAGGTTTTCAACTCTGTGGCT
GAAGGCCTGCAGAAACTTTACAAGGAGAAATTACTTCCCCTTGAAGAAGC
CTATAAATTCCATGAATTTCACTCACCCAAACTTGAAGACAGTGATTTCT
TTGCAAAGCCTATGGTACTTTTGGTTGGTCAATATTCTACTGGTAAAACA
ACCTTTATCAAATATTTACTTGAGCAAGATTTCCCAGGAATCAGAGTCGG
CCCTGAACCCACAACTGATACCTTCACATGTGTTATGCACGGTAATCATG
ATCGTGTTGTTCCTGGAAATGCACTTGTTGTAGATTCATCAAAATCCTTC
AGATCACTGTCCGCCTTTGGTAATGCTTTCTTGAACAGATTTGCCTGTTC
AGAAACTGCAAATCCTGTTTTGGAAACAATTACCCTTGTGGATTCCCCTG
GTATCCTTTCTGGTGAAAAACAATCAATTAACAGAGGGTATGATTTCACA
GGAGTACTTGAATGGTTTGCTGAGCGTGTAGATagaattattttgttatt
tgatGCCCATAAACTAGACATTTCTGACGAATTCAGACGGGGTATTGAAG
CTCTTCATGGATTTGATGACAAAATCcgtattgttttgaataaagcTGAT
ATGATTTCCACTCAGCAGCTGATGAGAGTTTATGGAGCTATGATGTGGTC
TTTAGGAAAGGTCATCAATACACCTGAAGTAACAAGAGTCTATGTAGGAT
CATTTTGGGATCAACCATTGAAAATGGACGATAATAGGAAACTTTTTGAA
TTAGAGGAAACAGATTTGTTTGCTGATTTACAAGGATTGCCAAAGAATGC
TGCACTACGAAAATTGAATGATCTGATCAGAAGAGCAAGGTTGGCCAAGG
tataaatttttcttcttttttcaaatgcgTAGTATCATTTCTTGCCAGTA
ATTTTAGACCATGAAACTCAGTTTACTTTTGATACTGTGTGCAGTGTGTG
TACTTCTTGGTTCTTTCATTACATAAGAACTTTGTAATTTCACGATTact
aaaatttttttcctttttctatttggttgagttgcaggaggctttaaaGG
CTTATTTTCACAACTATAGACATTTtcaatgagcgtcccgtcagcacctt
gaactgactacccaattcccctcacatggcatgggttgacccaggcGAAG
GTTCGTTCACTTGCTCAAACCATATTGGTAGCCAAGGGTGTTATTTGTAG
TTCAGCGTGTTTTCTTAACAAAGTTCTTGATTTTCTTAAAAGTTTCAAat
caatttctttcaaacttGACTTTGGTGAGGTAATTTCAAATtgaataatt
tgataaaaagaaacatataatgaaaagtgacaaaaaataaattttgataa
aaatatcaaaatagtaAGGAGTGAATAAGAAAACGAGTGAAGGTTTTAAA
GTGATGGATTAACTCTTTGGACTTTACTATTTTACCAAAATTAACCcaaa
attcattgaaacattGGAAAGTTTACAAAGATTTAACAAACTTAACAatt
ggaaataaaaaataagatttaAAGACCTTGTAAAAATTAAACCTGTGTAA
AATTCCTGTCTGAGAGTTACCCCTGCtatgtgtttttgagttttagaatc
TTCATCTTTAGCTTGATTAATAACTATTATATatgagagatctttaaatt
tcattaaatttgaattagaaATTAGATTGGCTAGTGGTTAACACAATCAA
TGGATTTctgaaactttttaaaacaaattgaaaCAGGTTATATATATACC
CCAAATAATGGGATAACTCTCAGATGAGAATCCTATACACAATTAGTATC
CCCTATCAAAACATATCGGAGGGGAGCCTATGTATAAATTTTAAAGGTGG
TTTTGTAGGAAATATTGTATTGTATAAATTGTAAAATCTCAGCCTCAAAT
ATGTAGGAGGAACCCCAAGGTTTTTGTTTGTGTCACTtttggaatttatt
tttaactttGAGCTTTGATAATCCCCCAGAAACTTTTTAATAAGATCATA
GAAAACAGTTGAAACATGTAAACCTCTGTCAGGCTTGCTATAACTCATTC
ATAAAGTGTCCTACTGTTTTGAACGGTAATACAAGTATTTATTGTTGAAA
CTTTTGCAATAAATGCACAACTATTACCAAAAGTAATTTGATATTTAAAG
GTCATGAAAGATTACTATTACTAACCTATGAATTCATTATTAACTCTACT
CGTTCATGTTTAGGTGAAAATAAGGTATTGTTAAAGCTCCGGTCTTGGTT
TCTCTTAGTTTGACGATGCTTGAACAAAATTCATAATTTATCCAAAGTAC
TTCAGATTTACTCTCACGTTGAAAAGGGTCATTTTTTCTAACCTAACAGT
GTTTGAAAGGTTCAAAGGTCGAATTCGTGTTATACTTGTCTGTGAACTTG
AAGTGTTGAATAAATaagaaatttcacttttctCAACGTCATAACTTTCA
ACAGAAAGCATTAACCTattaaagttttctttaaaaaatcctAAAGTCAG
AGCATCTGAGTTATAATTTTAGATGTCTGAAATGTTTGAATTGACTGACC
ACTAATTCAATTTAAAGATATCGATAATTTTGCGAGGGACTTAGATTCTA
ACGGAAAAACTACGTTCTTTTCTTTGAGAGCCTACCCTAACTGTTCAGGA
AATCGCATGTTTATCAAGTTAATTGCCCCCCTTTAAAGTGTTAAAATGGC
ATGGGACTTCATAGGGTAGAGAGGATACTAGAAACCCCTTTGTTGTTTTA
TGAAACTCTCAATTTGTTTGAAATATGACTCTCATTTTCCATGGCGACTG
AGCTATGATCAAagatatttgacaaaaatatatgACAGTTTTATGTAatc
aaaatgaaagaatgaatgaTTTTTCTTGTTTAACTCTGAAGTGACCACAA
TATTATGAGCACTTTCTTAATAATAACTACAGACGAACTTCTTTCATAAA
AGGTTTTCtcatttcatcaaattttaagaaattcatcaaaaatcattgaa
aacccTTCCCtatcatcatcaaaaacatatttttagtaAAGACACAATAT
TTGAACAAATCCATGGCAATTTTAtgtaaactttgttttgaatttcaact
tttctcacGTGGTAAAATATACAACGTCACAACTTTATTATGTTCGGGGG
GTCGGTCACCCAGGCAAAATAGGGTACGGGAGGATGTCACGCTCGCCAGG
TACACTTTTTCGTCTAAATTTCGTCCGACATTTTTCGAACTCCAGGTACG
TAAGTCACGTAAGCcacttttttttgtcatttttgattGTAACCCTTTAA
AAATCTAATTCCAGTGTTGACCTGACAGCGTTAACAATTTGCATCATCAG
TAAGTTTTCCGAAATAGACTAATTGCTTGCCGCCATTTTGTATGAACGCA
CGTGTATGACGACAAGCTACCACATGACAAGAAATCGCCCTTAGTTACCA
ACATGGAAATGATTAGAGAGGAAAAAGGTTGTCATGTCTGCGCGGAAGTT
GTTTTGATTAGAACTCATTATAAATGACATCAACTTTTCCAGTTGTTTAT
AAGCAATGTTACGAAGTTGCTATATACATAcactacagtatgtggccccc
aaaacggcgatcaaatttaaaacttctctcaaatctagaggaaaagaggt
tttacaaaaatttttgctgcatgaaaaacNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNttaattttttgttataaactattatttcaagctaataggaatggaatt
ccaagattttttgctgtttctcatatttagaattttcggttttatcaatg
ttaattctagggccccaaaatactggttgacctttaagatgctatatctt
ttacccatcgtCTAAAGTCACaaatgtatctgcattttctgaacggcatt
aggtgtagaaagttccctataccccattttcataacttattttcaatatc
caaatagctagagtgagttatatgcaatttttatctaattttggtgttaa
aatatttctctcagacgcaaatatgttaaatctgtctcaaaccatcaaaa
acatgttaatttttaagtataaccatcattctttcaaaataaacaaaaat
cgtttaattctgataaatctacaagtgagaatcctcattttaatgatgac
ctccgttttgggggccatatactgtacccTGTCAAAAATCTTTTCCAATG
GCGTACAAACCAAATAATAAAATCACCACCCTCTCCTTTCCTCAAAAAGT
TTGATATAAAAGTCCTTTCAGTAACTTTATCTAGACCAGAGATTTTTTCC
TAAAtgcaaaaattacaaagaaatctttttttgcaattttttacacCACG
TATCTCGAAACATCAATGCTTGTGGCTATGTTGGTACGTTTTGTCAATTT
AACAAGTTATAAAATACTAGGTTAAAGTTACAGTCAAATCTCTCTAtttc
gaacttctataattTGATtccttctgtaattcgaactaaaacattggtcc
cctcagctgtaAGTCAGTGTTaaattctctctgtaattcgaatctttccc
tATTTCGAAGAAATTTCTTGGTCTATAGAAGATCGAATTACAGCGATTCA
ACTGTAGTTTCgattaattttctttatatttttgccaattttcgcTCAAA
TTATGGCTTGTTTTACATTCTTCAGGTGCACGCCTACATCATGACTGCAT
TGAAAGACGATATGCCATCCGTCTTCGGTAAAGACAAGAAGAAAGCTGAA
CTCATCAAAAACCTAGGAGATACTTTCCGTCGTATCCAAATGCAACACGA
AATCTCACCTGGAGATTTCCCAAACCTCCAACGTATGCAAGAAAACTTGC
AATATCATGATTTCTCCAAATTCGCACCATTGAAACCGAAATTGATCGAG
AAAGTTGATCAGATGTTGAATACAGATATTGCTCGTTTAATGGCAATGTT
ACCTCAAGAATTCACTGACCGTGAAGACGAGCAAACTGTCAAAGGAGGTG
TTTTCGCCAGCGCTCAAGGTGATTTCAACCCGTTTGCTGAGGGTGCAGCA
GAAGGATTCAATCTGGGTGCAGGATCATCAGCGTGGGTCGTCGAAAGTAC
CAATTCAAAAGAGAAATACGACAGAATGTTTTTGGATTTGGGTCCAGTAG
ACGGGAAGCTATCCGGCGCTTCTGCTAAGAAGGAAATGGTCAAATCGAAA
TTGCCAAAGAACGCGTTAGCCAAGATTTGGACTTTGTCAGATATTGACAA
AGATGGACAGCTGGATGAAGAAGAGTTCGCATTAGCCATGTACTTGATTG
ACACCAAGTTAGGAGGTAGTGATGACATCCCAACTGTACTACCAGAGCAT
TTAGTACCGCCAGGCAAACGAAAGCTGTTGTTCGGTAACTAGGACACTTT
CTGGTGGACTTACATTTAGATGACTTTCAATTAGAAGTATTATTACAGTA
TTATAGTGACACTTTACAGATTCTTTTAGAAcacttaaaaaaacaacatt
ggaaaattatttttttataaaggattaattatttcattttttttcttctt
tgttttgtttcgtttttttttgtacaatttttttgtccTTTCCAATCATT
GATTTAAACTCTGAACCCATTTTCGAAGAAATTTCTGATATTTGATAAAC
AGAAAAACAAAGCAAGCAGTATGCGCCTCATCTACAGGGGACAGAACTAG
TAAGAACTTCACAAAGACTTCCGGGGTGTTGGGTAAAAGGGTCCAGCGTT
TATCAACGTCCAGTGTTTTCTCCACATTTTCTTGTTTATAGCTCCGTTTG
Aacgtttttttatgttttgttttttttgttcttcatcttctttttgacgt
ttagTTACTGTTCTTAAACTGTTCTTATCATTTCTTTATTGAAAACTTCT
TTGAACACGGTTGGGAATTTATACGCTATGGttccatagtcattataaaa
aactcCGTTCTGgaaatgtattgttttagctttttgttcaattttctttt
gttacaaacaaaagacaagttgcgatttCCATACTTTTgtatcacgttac
caaaatctcctcttgggattggtctattttttaatcacatgatcaaaaag
tttgcaaaataaatcgattttggtacgtaagctccatcttttaacaataa
aaagagacaaaagccttccagaccagtgtttttataatgactatgatggT
TCATAAAATCGATTATAAAGATGAGATTTTTAGTCTTACTTAACTCCCTT
TGGATACGTCCTGAAACTATTAATTAACATTGCGCCTGTATTTAACTTAA
AAAACAATCTTAACTACAAaactattatttttaaaattattctttaGTAG
AAAGAGATTTGTCTGTCAATTGCATTTTTTTGCGGAAATTTctcatttat
tttgaatttccatTTTATCGAAACGATAATTTTTTGACAGATCTTTTTCA
TTAATTTGACACATTTTGCAAGTTCTAATTTTTAGTTTTGCAGGGAAATG
TACTTAATAGAATgaagaaattaaattaaaaacag Coding sequence (CDS) from alignment at sc0000405:29711..37395+ >TCONS_00022092 ID=TCONS_00022092|Name=TCONS_00022092|organism=Clytia hemisphaerica|type=CDS|length=3240bp|location=Sequence derived from alignment at sc0000405:29711..37395+ (Clytia hemisphaerica)
ATGTCCAGGTGgggtaaaaaacaaaaacttccaGAGGTTTTCAACTCTGT
GGCTGAAGGCCTGCAGAAACTTTACAAGGAGAAATTACTTCCCCTTGAAG
AAGCCTATAAATTCCATGAATTTCACTCACCCAAACTTGAAGACAGTGAT
TTCTTTGCAAAGCCTATGGTACTTTTGGTTGGTCAATATTCTACTGGTAA
AACAACCTTTATCAAATATTTACTTGAGCAAGATTTCCCAGGAATCAGAG
TCGGCCCTGAACCCACAACTGATACCTTCACATGTGTTATGCACGGTAAT
CATGATCGTGTTGTTCCTGGAAATGCACTTGTTGTAGATTCATCAAAATC
CTTCAGATCACTGTCCGCCTTTGGTAATGCTTTCTTGAACAGATTTGCCT
GTTCAGAAACTGCAAATCCTGTTTTGGAAACAATTACCCTTGTGGATTCC
CCTGGTATCCTTTCTGGTGAAAAACAATCAATTAACAGAGGGTATGATTT
CACAGGAGTACTTGAATGGTTTGCTGAGCGTGTAGATagaattattttgt
tatttgatGCCCATAAACTAGACATTTCTGACGAATTCAGACGGGGTATT
GAAGCTCTTCATGGATTTGATGACAAAATCcgtattgttttgaataaagc
TGATATGATTTCCACTCAGCAGCTGATGAGAGTTTATGGAGCTATGATGT
GGTCTTTAGGAAAGGTCATCAATACACCTGAAGTAACAAGAGTCTATGTA
GGATCATTTTGGGATCAACCATTGAAAATGGACGATAATAGGAAACTTTT
TGAATTAGAGGAAACAGATTTGTTTGCTGATTTACAAGGATTGCCAAAGA
ATGCTGCACTACGAAAATTGAATGATCTGATCAGAAGAGCAAGGTTGGCC
AAGGTGCACGCCTACATCATGACTGCATTGAAAGACGATATGCCATCCGT
CTTCGGTAAAGACAAGAAGAAAGCTGAACTCATCAAAAACCTAGGAGATA
CTTTCCGTCGTATCCAAATGCAACACGAAATCTCACCTGGAGATTTCCCA
AACCTCCAACGTATGCAAGAAAACTTGCAATATCATGATTTCTCCAAATT
CGCACCATTGAAACCGAAATTGATCGAGAAAGTTGATCAGATGTTGAATA
CAGATATTGCTCGTTTAATGGCAATGTTACCTCAAGAATTCACTGACCGT
GAAGACGAGCAAACTGTCAAAGGAGGTGTTTTCGCCAGCGCTCAAGGTGA
TTTCAACCCGTTTGCTGAGGGTGCAGCAGAAGGATTCAATCTGGGTGCAG
GATCATCAGCGTGGGTCGTCGAAAGTACCAATTCAAAAGAGAAATACGAC
AGAATGTTTTTGGATTTGGGTCCAGTAGACGGGAAGCTATCCGGCGCTTC
TGCTAAGAAGGAAATGGTCAAATCGAAATTGCCAAAGAACGCGTTAGCCA
AGATTTGGACTTTGTCAGATATTGACAAAGATGGACAGCTGGATGAAGAA
GAGTTCGCATTAGCCATGTACTTGATTGACACCAAGTTAGGAGGTAGTGA
TGACATCCCAACTGTACTACCAGAGCATTTAGTACCGCCAGGCAAACGAA
AGCTGTTGTTCGGTAACTAGATGTCCAGGTGgggtaaaaaacaaaaactt
ccaGAGGTTTTCAACTCTGTGGCTGAAGGCCTGCAGAAACTTTACAAGGA
GAAATTACTTCCCCTTGAAGAAGCCTATAAATTCCATGAATTTCACTCAC
CCAAACTTGAAGACAGTGATTTCTTTGCAAAGCCTATGGTACTTTTGGTT
GGTCAATATTCTACTGGTAAAACAACCTTTATCAAATATTTACTTGAGCA
AGATTTCCCAGGAATCAGAGTCGGCCCTGAACCCACAACTGATACCTTCA
CATGTGTTATGCACGGTAATCATGATCGTGTTGTTCCTGGAAATGCACTT
GTTGTAGATTCATCAAAATCCTTCAGATCACTGTCCGCCTTTGGTAATGC
TTTCTTGAACAGATTTGCCTGTTCAGAAACTGCAAATCCTGTTTTGGAAA
CAATTACCCTTGTGGATTCCCCTGGTATCCTTTCTGGTGAAAAACAATCA
ATTAACAGAGGGTATGATTTCACAGGAGTACTTGAATGGTTTGCTGAGCG
TGTAGATagaattattttgttatttgatGCCCATAAACTAGACATTTCTG
ACGAATTCAGACGGGGTATTGAAGCTCTTCATGGATTTGATGACAAAATC
cgtattgttttgaataaagcTGATATGATTTCCACTCAGCAGCTGATGAG
AGTTTATGGAGCTATGATGTGGTCTTTAGGAAAGGTCATCAATACACCTG
AAGTAACAAGAGTCTATGTAGGATCATTTTGGGATCAACCATTGAAAATG
GACGATAATAGGAAACTTTTTGAATTAGAGGAAACAGATTTGTTTGCTGA
TTTACAAGGATTGCCAAAGAATGCTGCACTACGAAAATTGAATGATCTGA
TCAGAAGAGCAAGGTTGGCCAAGGTGCACGCCTACATCATGACTGCATTG
AAAGACGATATGCCATCCGTCTTCGGTAAAGACAAGAAGAAAGCTGAACT
CATCAAAAACCTAGGAGATACTTTCCGTCGTATCCAAATGCAACACGAAA
TCTCACCTGGAGATTTCCCAAACCTCCAACGTATGCAAGAAAACTTGCAA
TATCATGATTTCTCCAAATTCGCACCATTGAAACCGAAATTGATCGAGAA
AGTTGATCAGATGTTGAATACAGATATTGCTCGTTTAATGGCAATGTTAC
CTCAAGAATTCACTGACCGTGAAGACGAGCAAACTGTCAAAGGAGGTGTT
TTCGCCAGCGCTCAAGGTGATTTCAACCCGTTTGCTGAGGGTGCAGCAGA
AGGATTCAATCTGGGTGCAGGATCATCAGCGTGGGTCGTCGAAAGTACCA
ATTCAAAAGAGAAATACGACAGAATGTTTTTGGATTTGGGTCCAGTAGAC
GGGAAGCTATCCGGCGCTTCTGCTAAGAAGGAAATGGTCAAATCGAAATT
GCCAAAGAACGCGTTAGCCAAGATTTGGACTTTGTCAGATATTGACAAAG
ATGGACAGCTGGATGAAGAAGAGTTCGCATTAGCCATGTACTTGATTGAC
ACCAAGTTAGGAGGTAGTGATGACATCCCAACTGTACTACCAGAGCATTT
AGTACCGCCAGGCAAACGAAAGCTGTTGTTCGGTAACTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00022092-exon-sc0000405-1491911889:29711..29881 | TCONS_00022092-exon-sc0000405-1491911889:29711..29881 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1510915933:29711..29881 | TCONS_00022092-exon-sc0000405-1510915933:29711..29881 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1575043694:29711..29881 | TCONS_00022092-exon-sc0000405-1575043694:29711..29881 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1491911889:30093..31009 | TCONS_00022092-exon-sc0000405-1491911889:30093..31009 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1510915933:30093..31009 | TCONS_00022092-exon-sc0000405-1510915933:30093..31009 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1575043694:30093..31009 | TCONS_00022092-exon-sc0000405-1575043694:30093..31009 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1491911889:35536..37395 | TCONS_00022092-exon-sc0000405-1491911889:35536..37395 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1510915933:35536..37395 | TCONS_00022092-exon-sc0000405-1510915933:35536..37395 | Clytia hemisphaerica | exon |
| TCONS_00022092-exon-sc0000405-1575043694:35536..37395 | TCONS_00022092-exon-sc0000405-1575043694:35536..37395 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000405 | supercontig | sc0000405:29711..37395 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
| GO:0005525 | GTP binding |
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
| molecular_function |
GO:0005525 |
GTP binding |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00022092 vs. Swiss-Prot (Human)
Match: EHD3 (EH domain-containing protein 3 OS=Homo sapiens GN=EHD3 PE=1 SV=2) HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0 Identity = 351/530 (66.23%), Postives = 420/530 (79.25%), Query Frame = 3
Query: 201 KKQKLPEVFNSVAEGXXXXXXXXXXXXXXAYKFHEFHSPKLEDSDFFAKPMVLLVGQYSTGKTTFIKYLLEQDFPGIRVGPEPTTDTFTCVMHGNHDRVVPGNALVVDSSKSFRSLSAFGNAFLNRFACSETANPVLETITLVDSPGILSGEKQSINRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRGIEALHGFDDKIRIVLNKADMISTQQLMRVYGAMMWSLGKVINTPEVTRVYVGSFWDQPLKMDDNRKLFELEETDLFADLQGLPKNAALRKLNDLIRRARLAKVHAYIMTALKDDMPSVFGKDKKKAELIKNLGDTFRRIQMQHEISPGDFPNLQRMQENLQYHDFSKFAPLKPKLIEKVDQMLNTDIARLMAMLPQEFTDREDEQTVKGGVFASAQGDFNPFAEGAAEGFNLGAGSSAWVVESTNSKEKYDRMFLDLGPVDGKLSGASAKKEMVKSKLPKNALAKIWTLSDIDKDGQLDEEEFALAMYLIDTKLGGSDDIPTVLPEHLVPPGKRKL 1790
+++K PEVF +V+EGL+KLYK KLLPLEE Y+FHEFHSP LED+DF KPMVLLVGQYSTGKTTFI+YLLEQDFPG+R+GPEPTTD+F VM G+ + ++PGNALVVD K FR L+AFGNAFLNRF C++ NPVLE+I+++D+PGILSGEKQ I+RGYDF VLEWFAERVDRIILLFDAHKLDISDEF I+AL +DK+R+VLNKAD I TQQLMRVYGA+MWSLGK++NTPEV RVY+GSFW PL + DNRKLFE EE DLF D+Q LP+NAALRKLNDLI+RARLAKVHAYI+++LK +MPSVFGKD KK EL+ NL + + RI+ +H+ISPGDFPNL+RMQ+ LQ DFSKF PLK KL+E VD ML DIA+LM ++ QE + R Q VKGG F PF G EG G + WVV K YD +F L PVDGK++GA+AKKEMV+SKLP + L KIW L+DIDKDG LD++EFALA +LI KL G ++P LP HL+PP KRK+
Sbjct: 10 RRRKDPEVFQTVSEGLKKLYKSKLLPLEEHYRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMQGDMEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCAQLPNPVLESISVIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDNKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLMVLVRQEESQRPI-QMVKGGAFEGTL--HGPFGHGYGEGAGEGIDDAEWVV--ARDKPMYDEIFYTLSPVDGKITGANAKKEMVRSKLPNSVLGKIWKLADIDKDGMLDDDEFALANHLIKVKLEGH-ELPNELPAHLLPPSKRKV 533
The following BLAST results are available for this feature:
|
