TCONS_00022093 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022093
Unique NameTCONS_00022093
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022093 ID=TCONS_00022093|Name=TCONS_00022093|organism=Clytia hemisphaerica|type=transcript|length=3159bp
CTTAAATTGAGCAGGAAGCCGGGGCCAAAACTAAACACCCAGAAAGTGTT
GACACATTTATTCATTCAAACTTCTTGATATACTTGTTAAAACTCTTGTA
CTAAAACCTTTGAGGGTTTGGATTTTGATcagttttttgcttgaaaagtt
GTTCTTCGACCTTTCCGCTTGGTAAGCGCTCGATTTCACATTATTTCGAT
CGAGAGAAGACTTCGCGTTACCGCCCTATTCAAGATTTACAGAGACAGTC
AAAATGGATGAATTGTTTTGGTAATTGTATGGCTAATACGGTTAATTCAA
CGTAATTGTCTTATGAGGTTTAGTATCtccttttttcatattttattaGT
ACTTATTTTATCTTAATCTGTCTATTTTCTAGGTAAAATACTCAAAATGT
CCAGGTGgggtaaaaaacaaaaacttccaGAGGTTTTCAACTCTGTGGCT
GAAGGCCTGCAGAAACTTTACAAGGAGAAATTACTTCCCCTTGAAGAAGC
CTATAAATTCCATGAATTTCACTCACCCAAACTTGAAGACAGTGATTTCT
TTGCAAAGCCTATGGTACTTTTGGTTGGTCAATATTCTACTGGTAAAACA
ACCTTTATCAAATATTTACTTGAGCAAGATTTCCCAGGAATCAGAGTCGG
CCCTGAACCCACAACTGATACCTTCACATGTGTTATGCACGGTAATCATG
ATCGTGTTGTTCCTGGAAATGCACTTGTTGTAGATTCATCAAAATCCTTC
AGATCACTGTCCGCCTTTGGTAATGCTTTCTTGAACAGATTTGCCTGTTC
AGAAACTGCAAATCCTGTTTTGGAAACAATTACCCTTGTGGATTCCCCTG
GTATCCTTTCTGGTGAAAAACAATCAATTAACAGAGGGTATGATTTCACA
GGAGTACTTGAATGGTTTGCTGAGCGTGTAGATagaattattttgttatt
tgatGCCCATAAACTAGACATTTCTGACGAATTCAGACGGGGTATTGAAG
CTCTTCATGGATTTGATGACAAAATCcgtattgttttgaataaagcTGAT
ATGATTTCCACTCAGCAGCTGATGAGAGTTTATGGAGCTATGATGTGGTC
TTTAGGAAAGGTCATCAATACACCTGAAGTAACAAGAGTCTATGTAGGAT
CATTTTGGGATCAACCATTGAAAATGGACGATAATAGGAAACTTTTTGAA
TTAGAGGAAACAGATTTGTTTGCTGATTTACAAGGATTGCCAAAGAATGC
TGCACTACGAAAATTGAATGATCTGATCAGAAGAGCAAGGTTGGCCAAGG
TGCACGCCTACATCATGACTGCATTGAAAGACGATATGCCATCCGTCTTC
GGTAAAGACAAGAAGAAAGCTGAACTCATCAAAAACCTAGGAGATACTTT
CCGTCGTATCCAAATGCAACACGAAATCTCACCTGGAGATTTCCCAAACC
TCCAACGTATGCAAGAAAACTTGCAATATCATGATTTCTCCAAATTCGCA
CCATTGAAACCGAAATTGATCGAGAAAGTTGATCAGATGTTGAATACAGA
TATTGCTCGTTTAATGGCAATGTTACCTCAAGAATTCACTGACCGTGAAG
ACGAGCAAACTGTCAAAGGAGGTGTTTTCGCCAGCGCTCAAGGTGATTTC
AACCCGTTTGCTGAGGGTGCAGCAGAAGGATTCAATCTGGGTGCAGGATC
ATCAGCGTGGGTCGTCGAAAGTACCAATTCAAAAGAGAAATACGACAGAA
TGTTTTTGGATTTGGGTCCAGTAGACGGGAAGCTATCCGGCGCTTCTGCT
AAGAAGGAAATGGTCAAATCGAAATTGCCAAAGAACGCGTTAGCCAAGAT
TTGGACTTTGTCAGATATTGACAAAGATGGACAGCTGGATGAAGAAGAGT
TCGCATTAGCCATGTACTTGATTGACACCAAGTTAGGAGGTAGTGATGAC
ATCCCAACTGTACTACCAGAGCATTTAGTACCGCCAGGCAAACGAAAGCT
GTTGTTCGGTAACTAGGACACTTTCTGGTGGACTTACATTTAGATGACTT
TCAATTAGAAGTATTATTACAGTATTATAGTGACACTTTACAGATTCTTT
TAGAAcacttaaaaaaacaacattggaaaattatttttttataaaggatt
aattatttcattttttttcttctttgttttgtttcgtttttttttgtaca
atttttttgtccTTTCCAATCATTGATTTAAACTCTGAACCCATTTTCGA
AGAAATTTCTGATATTTGATAAACAGAAAAACAAAGCAAGCAGTATGCGC
CTCATCTACAGGGGACAGAACTAGTAAGAACTTCACAAAGACTTCCGGGG
TGTTGGGTAAAAGGGTCCAGCGTTTATCAACGTCCAGTGTTTTCTCCACA
TTTTCTTGTTTATAGCTCCGTTTGAacgtttttttatgttttgttttttt
tgttcttcatcttctttttgacgtttagTTACTGTTCTTAAACTGTTCTT
ATCATTTCTTTATTGAAAACTTCTTTGAACACGGTTGGGAATTTATACGC
TATGGttccatagtcattataaaaaactcCGTTCTGgaaatgtattgttt
tagctttttgttcaattttcttttgttacaaacaaaagacaagttgcgat
ttCCATACTTTTgtatcacgttaccaaaatctcctcttgggattggtcta
ttttttaatcacatgatcaaaaagtttgcaaaataaatcgattttggtac
gtaagctccatcttttaacaataaaaagagacaaaagccttccagaccag
tgtttttataatgactatgatggTTCATAAAATCGATTATAAAGATGAGA
TTTTTAGTCTTACTTAACTCCCTTTGGATACGTCCTGAAACTATTAATTA
ACATTGCGCCTGTATTTAACTTAAAAAACAATCTTAACTACAAaactatt
atttttaaaattattctttaGTAGAAAGAGATTTGTCTGTCAATTGCATT
TTTTTGCGGAAATTTctcatttattttgaatttccatTTTATCGAAACGA
TAATTTTTTGACAGATCTTTTTCATTAATTTGACACATTTTGCAAGTTCT
AATTTTTAGTTTTGCAGGGAAATGTACTTAATAGAATgaagaaattaaat
taaaaacag
Run BLAST on NCBI

transcript from alignment at sc0000405:29711..37395+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022093 ID=TCONS_00022093|Name=TCONS_00022093|organism=Clytia hemisphaerica|type=transcript|length=7685bp|location=Sequence derived from alignment at sc0000405:29711..37395+ (Clytia hemisphaerica)
CTTAAATTGAGCAGGAAGCCGGGGCCAAAACTAAACACCCAGAAAGTGTT GACACATTTATTCATTCAAACTTCTTGATATACTTGTTAAAACTCTTGTA CTAAAACCTTTGAGGGTTTGGATTTTGATcagttttttgcttgaaaagtt GTTCTTCGACCTTTCCGCTTGGTAAGCGCTCGATTTCACATTATTTCGAT CGAGAGAAGACTTCGCGTTACCGCCCTATTCAAGATTTACAGAGACAGTC AAAATGGATGAATTGTTTTGGTAATTGTATGGCTAATACGGTTAATTCAA CGTAATTGTCTTATGAGGTTTAGTATCtccttttttcatattttattaGT ACTTATTTTATCTTAATCTGTCTATTTTCTAGGTAAAATACTCAAAATGT CCAGGTGgggtaaaaaacaaaaacttccaGAGGTTTTCAACTCTGTGGCT GAAGGCCTGCAGAAACTTTACAAGGAGAAATTACTTCCCCTTGAAGAAGC CTATAAATTCCATGAATTTCACTCACCCAAACTTGAAGACAGTGATTTCT TTGCAAAGCCTATGGTACTTTTGGTTGGTCAATATTCTACTGGTAAAACA ACCTTTATCAAATATTTACTTGAGCAAGATTTCCCAGGAATCAGAGTCGG CCCTGAACCCACAACTGATACCTTCACATGTGTTATGCACGGTAATCATG ATCGTGTTGTTCCTGGAAATGCACTTGTTGTAGATTCATCAAAATCCTTC AGATCACTGTCCGCCTTTGGTAATGCTTTCTTGAACAGATTTGCCTGTTC AGAAACTGCAAATCCTGTTTTGGAAACAATTACCCTTGTGGATTCCCCTG GTATCCTTTCTGGTGAAAAACAATCAATTAACAGAGGGTATGATTTCACA GGAGTACTTGAATGGTTTGCTGAGCGTGTAGATagaattattttgttatt tgatGCCCATAAACTAGACATTTCTGACGAATTCAGACGGGGTATTGAAG CTCTTCATGGATTTGATGACAAAATCcgtattgttttgaataaagcTGAT ATGATTTCCACTCAGCAGCTGATGAGAGTTTATGGAGCTATGATGTGGTC TTTAGGAAAGGTCATCAATACACCTGAAGTAACAAGAGTCTATGTAGGAT CATTTTGGGATCAACCATTGAAAATGGACGATAATAGGAAACTTTTTGAA TTAGAGGAAACAGATTTGTTTGCTGATTTACAAGGATTGCCAAAGAATGC TGCACTACGAAAATTGAATGATCTGATCAGAAGAGCAAGGTTGGCCAAGG tataaatttttcttcttttttcaaatgcgTAGTATCATTTCTTGCCAGTA ATTTTAGACCATGAAACTCAGTTTACTTTTGATACTGTGTGCAGTGTGTG TACTTCTTGGTTCTTTCATTACATAAGAACTTTGTAATTTCACGATTact aaaatttttttcctttttctatttggttgagttgcaggaggctttaaaGG CTTATTTTCACAACTATAGACATTTtcaatgagcgtcccgtcagcacctt gaactgactacccaattcccctcacatggcatgggttgacccaggcGAAG GTTCGTTCACTTGCTCAAACCATATTGGTAGCCAAGGGTGTTATTTGTAG TTCAGCGTGTTTTCTTAACAAAGTTCTTGATTTTCTTAAAAGTTTCAAat caatttctttcaaacttGACTTTGGTGAGGTAATTTCAAATtgaataatt tgataaaaagaaacatataatgaaaagtgacaaaaaataaattttgataa aaatatcaaaatagtaAGGAGTGAATAAGAAAACGAGTGAAGGTTTTAAA GTGATGGATTAACTCTTTGGACTTTACTATTTTACCAAAATTAACCcaaa attcattgaaacattGGAAAGTTTACAAAGATTTAACAAACTTAACAatt ggaaataaaaaataagatttaAAGACCTTGTAAAAATTAAACCTGTGTAA AATTCCTGTCTGAGAGTTACCCCTGCtatgtgtttttgagttttagaatc TTCATCTTTAGCTTGATTAATAACTATTATATatgagagatctttaaatt tcattaaatttgaattagaaATTAGATTGGCTAGTGGTTAACACAATCAA TGGATTTctgaaactttttaaaacaaattgaaaCAGGTTATATATATACC CCAAATAATGGGATAACTCTCAGATGAGAATCCTATACACAATTAGTATC CCCTATCAAAACATATCGGAGGGGAGCCTATGTATAAATTTTAAAGGTGG TTTTGTAGGAAATATTGTATTGTATAAATTGTAAAATCTCAGCCTCAAAT ATGTAGGAGGAACCCCAAGGTTTTTGTTTGTGTCACTtttggaatttatt tttaactttGAGCTTTGATAATCCCCCAGAAACTTTTTAATAAGATCATA GAAAACAGTTGAAACATGTAAACCTCTGTCAGGCTTGCTATAACTCATTC ATAAAGTGTCCTACTGTTTTGAACGGTAATACAAGTATTTATTGTTGAAA CTTTTGCAATAAATGCACAACTATTACCAAAAGTAATTTGATATTTAAAG GTCATGAAAGATTACTATTACTAACCTATGAATTCATTATTAACTCTACT CGTTCATGTTTAGGTGAAAATAAGGTATTGTTAAAGCTCCGGTCTTGGTT TCTCTTAGTTTGACGATGCTTGAACAAAATTCATAATTTATCCAAAGTAC TTCAGATTTACTCTCACGTTGAAAAGGGTCATTTTTTCTAACCTAACAGT GTTTGAAAGGTTCAAAGGTCGAATTCGTGTTATACTTGTCTGTGAACTTG AAGTGTTGAATAAATaagaaatttcacttttctCAACGTCATAACTTTCA ACAGAAAGCATTAACCTattaaagttttctttaaaaaatcctAAAGTCAG AGCATCTGAGTTATAATTTTAGATGTCTGAAATGTTTGAATTGACTGACC ACTAATTCAATTTAAAGATATCGATAATTTTGCGAGGGACTTAGATTCTA ACGGAAAAACTACGTTCTTTTCTTTGAGAGCCTACCCTAACTGTTCAGGA AATCGCATGTTTATCAAGTTAATTGCCCCCCTTTAAAGTGTTAAAATGGC ATGGGACTTCATAGGGTAGAGAGGATACTAGAAACCCCTTTGTTGTTTTA TGAAACTCTCAATTTGTTTGAAATATGACTCTCATTTTCCATGGCGACTG AGCTATGATCAAagatatttgacaaaaatatatgACAGTTTTATGTAatc aaaatgaaagaatgaatgaTTTTTCTTGTTTAACTCTGAAGTGACCACAA TATTATGAGCACTTTCTTAATAATAACTACAGACGAACTTCTTTCATAAA AGGTTTTCtcatttcatcaaattttaagaaattcatcaaaaatcattgaa aacccTTCCCtatcatcatcaaaaacatatttttagtaAAGACACAATAT TTGAACAAATCCATGGCAATTTTAtgtaaactttgttttgaatttcaact tttctcacGTGGTAAAATATACAACGTCACAACTTTATTATGTTCGGGGG GTCGGTCACCCAGGCAAAATAGGGTACGGGAGGATGTCACGCTCGCCAGG TACACTTTTTCGTCTAAATTTCGTCCGACATTTTTCGAACTCCAGGTACG TAAGTCACGTAAGCcacttttttttgtcatttttgattGTAACCCTTTAA AAATCTAATTCCAGTGTTGACCTGACAGCGTTAACAATTTGCATCATCAG TAAGTTTTCCGAAATAGACTAATTGCTTGCCGCCATTTTGTATGAACGCA CGTGTATGACGACAAGCTACCACATGACAAGAAATCGCCCTTAGTTACCA ACATGGAAATGATTAGAGAGGAAAAAGGTTGTCATGTCTGCGCGGAAGTT GTTTTGATTAGAACTCATTATAAATGACATCAACTTTTCCAGTTGTTTAT AAGCAATGTTACGAAGTTGCTATATACATAcactacagtatgtggccccc aaaacggcgatcaaatttaaaacttctctcaaatctagaggaaaagaggt tttacaaaaatttttgctgcatgaaaaacNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNttaattttttgttataaactattatttcaagctaataggaatggaatt ccaagattttttgctgtttctcatatttagaattttcggttttatcaatg ttaattctagggccccaaaatactggttgacctttaagatgctatatctt ttacccatcgtCTAAAGTCACaaatgtatctgcattttctgaacggcatt aggtgtagaaagttccctataccccattttcataacttattttcaatatc caaatagctagagtgagttatatgcaatttttatctaattttggtgttaa aatatttctctcagacgcaaatatgttaaatctgtctcaaaccatcaaaa acatgttaatttttaagtataaccatcattctttcaaaataaacaaaaat cgtttaattctgataaatctacaagtgagaatcctcattttaatgatgac ctccgttttgggggccatatactgtacccTGTCAAAAATCTTTTCCAATG GCGTACAAACCAAATAATAAAATCACCACCCTCTCCTTTCCTCAAAAAGT TTGATATAAAAGTCCTTTCAGTAACTTTATCTAGACCAGAGATTTTTTCC TAAAtgcaaaaattacaaagaaatctttttttgcaattttttacacCACG TATCTCGAAACATCAATGCTTGTGGCTATGTTGGTACGTTTTGTCAATTT AACAAGTTATAAAATACTAGGTTAAAGTTACAGTCAAATCTCTCTAtttc gaacttctataattTGATtccttctgtaattcgaactaaaacattggtcc cctcagctgtaAGTCAGTGTTaaattctctctgtaattcgaatctttccc tATTTCGAAGAAATTTCTTGGTCTATAGAAGATCGAATTACAGCGATTCA ACTGTAGTTTCgattaattttctttatatttttgccaattttcgcTCAAA TTATGGCTTGTTTTACATTCTTCAGGTGCACGCCTACATCATGACTGCAT TGAAAGACGATATGCCATCCGTCTTCGGTAAAGACAAGAAGAAAGCTGAA CTCATCAAAAACCTAGGAGATACTTTCCGTCGTATCCAAATGCAACACGA AATCTCACCTGGAGATTTCCCAAACCTCCAACGTATGCAAGAAAACTTGC AATATCATGATTTCTCCAAATTCGCACCATTGAAACCGAAATTGATCGAG AAAGTTGATCAGATGTTGAATACAGATATTGCTCGTTTAATGGCAATGTT ACCTCAAGAATTCACTGACCGTGAAGACGAGCAAACTGTCAAAGGAGGTG TTTTCGCCAGCGCTCAAGGTGATTTCAACCCGTTTGCTGAGGGTGCAGCA GAAGGATTCAATCTGGGTGCAGGATCATCAGCGTGGGTCGTCGAAAGTAC CAATTCAAAAGAGAAATACGACAGAATGTTTTTGGATTTGGGTCCAGTAG ACGGGAAGCTATCCGGCGCTTCTGCTAAGAAGGAAATGGTCAAATCGAAA TTGCCAAAGAACGCGTTAGCCAAGATTTGGACTTTGTCAGATATTGACAA AGATGGACAGCTGGATGAAGAAGAGTTCGCATTAGCCATGTACTTGATTG ACACCAAGTTAGGAGGTAGTGATGACATCCCAACTGTACTACCAGAGCAT TTAGTACCGCCAGGCAAACGAAAGCTGTTGTTCGGTAACTAGGACACTTT CTGGTGGACTTACATTTAGATGACTTTCAATTAGAAGTATTATTACAGTA TTATAGTGACACTTTACAGATTCTTTTAGAAcacttaaaaaaacaacatt ggaaaattatttttttataaaggattaattatttcattttttttcttctt tgttttgtttcgtttttttttgtacaatttttttgtccTTTCCAATCATT GATTTAAACTCTGAACCCATTTTCGAAGAAATTTCTGATATTTGATAAAC AGAAAAACAAAGCAAGCAGTATGCGCCTCATCTACAGGGGACAGAACTAG TAAGAACTTCACAAAGACTTCCGGGGTGTTGGGTAAAAGGGTCCAGCGTT TATCAACGTCCAGTGTTTTCTCCACATTTTCTTGTTTATAGCTCCGTTTG Aacgtttttttatgttttgttttttttgttcttcatcttctttttgacgt ttagTTACTGTTCTTAAACTGTTCTTATCATTTCTTTATTGAAAACTTCT TTGAACACGGTTGGGAATTTATACGCTATGGttccatagtcattataaaa aactcCGTTCTGgaaatgtattgttttagctttttgttcaattttctttt gttacaaacaaaagacaagttgcgatttCCATACTTTTgtatcacgttac caaaatctcctcttgggattggtctattttttaatcacatgatcaaaaag tttgcaaaataaatcgattttggtacgtaagctccatcttttaacaataa aaagagacaaaagccttccagaccagtgtttttataatgactatgatggT TCATAAAATCGATTATAAAGATGAGATTTTTAGTCTTACTTAACTCCCTT TGGATACGTCCTGAAACTATTAATTAACATTGCGCCTGTATTTAACTTAA AAAACAATCTTAACTACAAaactattatttttaaaattattctttaGTAG AAAGAGATTTGTCTGTCAATTGCATTTTTTTGCGGAAATTTctcatttat tttgaatttccatTTTATCGAAACGATAATTTTTTGACAGATCTTTTTCA TTAATTTGACACATTTTGCAAGTTCTAATTTTTAGTTTTGCAGGGAAATG TACTTAATAGAATgaagaaattaaattaaaaacag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012390XLOC_012390Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022093-exon-sc0000405-1491911889:29711..31009TCONS_00022093-exon-sc0000405-1491911889:29711..31009Clytia hemisphaericaexon
TCONS_00022093-exon-sc0000405-1510915933:29711..31009TCONS_00022093-exon-sc0000405-1510915933:29711..31009Clytia hemisphaericaexon
TCONS_00022093-exon-sc0000405-1575043694:29711..31009TCONS_00022093-exon-sc0000405-1575043694:29711..31009Clytia hemisphaericaexon
TCONS_00022093-exon-sc0000405-1491911889:35536..37395TCONS_00022093-exon-sc0000405-1491911889:35536..37395Clytia hemisphaericaexon
TCONS_00022093-exon-sc0000405-1510915933:35536..37395TCONS_00022093-exon-sc0000405-1510915933:35536..37395Clytia hemisphaericaexon
TCONS_00022093-exon-sc0000405-1575043694:35536..37395TCONS_00022093-exon-sc0000405-1575043694:35536..37395Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:29711..37395 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.2549 33.1207 19.2282 11.1753 0.453495 0.537537 0.86393 1.61902 36.2413 47.3863 32.5367 26.8754 23.036 14.404 42.0094 46.1072 29.7886 18.8652 18.6851 29.4992 12.03 8.56387 24.2589 21.2078 1.08315 0.644459 25.5504 19.4383 18.1025 15.5915
Blast
BLAST of TCONS_00022093 vs. Swiss-Prot (Human)
Match: EHD3 (EH domain-containing protein 3 OS=Homo sapiens GN=EHD3 PE=1 SV=2)

HSP 1 Score: 693.73 bits (1789), Expect = 0.000e+0
Identity = 351/530 (66.23%), Postives = 420/530 (79.25%), Query Frame = 1
Query:  412 KKQKLPEVFNSVAEGXXXXXXXXXXXXXXAYKFHEFHSPKLEDSDFFAKPMVLLVGQYSTGKTTFIKYLLEQDFPGIRVGPEPTTDTFTCVMHGNHDRVVPGNALVVDSSKSFRSLSAFGNAFLNRFACSETANPVLETITLVDSPGILSGEKQSINRGYDFTGVLEWFAERVDRIILLFDAHKLDISDEFRRGIEALHGFDDKIRIVLNKADMISTQQLMRVYGAMMWSLGKVINTPEVTRVYVGSFWDQPLKMDDNRKLFELEETDLFADLQGLPKNAALRKLNDLIRRARLAKVHAYIMTALKDDMPSVFGKDKKKAELIKNLGDTFRRIQMQHEISPGDFPNLQRMQENLQYHDFSKFAPLKPKLIEKVDQMLNTDIARLMAMLPQEFTDREDEQTVKGGVFASAQGDFNPFAEGAAEGFNLGAGSSAWVVESTNSKEKYDRMFLDLGPVDGKLSGASAKKEMVKSKLPKNALAKIWTLSDIDKDGQLDEEEFALAMYLIDTKLGGSDDIPTVLPEHLVPPGKRKL 2001
            +++K PEVF +V+EGL+KLYK KLLPLEE Y+FHEFHSP LED+DF  KPMVLLVGQYSTGKTTFI+YLLEQDFPG+R+GPEPTTD+F  VM G+ + ++PGNALVVD  K FR L+AFGNAFLNRF C++  NPVLE+I+++D+PGILSGEKQ I+RGYDF  VLEWFAERVDRIILLFDAHKLDISDEF   I+AL   +DK+R+VLNKAD I TQQLMRVYGA+MWSLGK++NTPEV RVY+GSFW  PL + DNRKLFE EE DLF D+Q LP+NAALRKLNDLI+RARLAKVHAYI+++LK +MPSVFGKD KK EL+ NL + + RI+ +H+ISPGDFPNL+RMQ+ LQ  DFSKF PLK KL+E VD ML  DIA+LM ++ QE + R   Q VKGG F        PF  G  EG   G   + WVV     K  YD +F  L PVDGK++GA+AKKEMV+SKLP + L KIW L+DIDKDG LD++EFALA +LI  KL G  ++P  LP HL+PP KRK+
Sbjct:   10 RRRKDPEVFQTVSEGLKKLYKSKLLPLEEHYRFHEFHSPALEDADFDNKPMVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDSFIAVMQGDMEGIIPGNALVVDPKKPFRKLNAFGNAFLNRFVCAQLPNPVLESISVIDTPGILSGEKQRISRGYDFAAVLEWFAERVDRIILLFDAHKLDISDEFSEVIKALKNHEDKMRVVLNKADQIETQQLMRVYGALMWSLGKIVNTPEVIRVYIGSFWSHPLLIPDNRKLFEAEEQDLFRDIQSLPRNAALRKLNDLIKRARLAKVHAYIISSLKKEMPSVFGKDNKKKELVNNLAEIYGRIEREHQISPGDFPNLKRMQDQLQAQDFSKFQPLKSKLLEVVDDMLAHDIAQLMVLVRQEESQRPI-QMVKGGAFEGTL--HGPFGHGYGEGAGEGIDDAEWVV--ARDKPMYDEIFYTLSPVDGKITGANAKKEMVRSKLPNSVLGKIWKLADIDKDGMLDDDEFALANHLIKVKLEGH-ELPNELPAHLLPPSKRKV 533          
The following BLAST results are available for this feature:
BLAST of TCONS_00022093 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EHD30.000e+066.23EH domain-containing protein 3 OS=Homo sapiens GN=... [more]
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