TCONS_00023114 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023114
Unique NameTCONS_00023114
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2878

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023114 ID=TCONS_00023114|Name=TCONS_00023114|organism=Clytia hemisphaerica|type=transcript|length=2878bp
TTCCAGTCAATCATCATCATACAAGTAGGAAAGGAGAAACATTAGTCTAC
GCTCATAATTGTGGAAGGCCTACCAATATACACGCATTCGAAGTTTCGGA
CGAGAATGGAATCACAGATGACGATACATGTATCCCAATCAGCACTGGTC
CTTCAGTTGCCAACACTGTCAAAGAATTCAATCAAAGAGCAATGCAGTAT
TACAAAGACCATATCGACGTCAAAACCTTCCCACCCTCGTATTACgtaca
aaatgaaaacattaaagAAGTTATCGCGAGTCTTGAAAAACATTCATCAC
TTCTTGGAGGAAAAATTCTCGTCGGATATAACCCCATAAACCATCTCAGA
ATACTTGGACTCGATTATCAAAAGATTGAGAGTGTTCTGCAATTTTCTGA
AAAGCCTGATCACTATGACAACACAATCGTTTGTATTTATCCCAATCATA
GCTTGATGTTTGTTTACGTGGTTGGTGAAAACGAAAAACATCTTGACAAG
GATTTGGCGAAAGTCAATGCTGTCTTGAAAACATGGTGTTATGTTCACAG
GCAGATTCTCCAAAATGAACAGTTTACTATTGTTGGAGTTCTCGTCTTAC
CGGCTTCAAGCGActtgaacaaaatgtttaagCAACATCCTTGCTTAAAT
CTAAACACAGAGAGTCAGGATTTTGTCATTTCTTACGATAAAAGTTTTGG
ACAGTGGTTAACCAACTTCTTANTGAAGCAGCATCCTTGCTTGAATCTAA
ACACAAAGAGTCAGGACTTTGTCATTTCTTTCGATGAAAACTTTGGACAA
TGGTTGACCAGCTTCTTAAAATTAATCCGGGATAATCGAAAGCTTTCATC
ACCCTCAACACCAGAAGTAATGGAAAATATTACAGGCAACATGATGGCGA
GCATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCAGGAAATGACACT
ATGAACGTTAAGACCNTCATCGCCAGAAATAATGGAAAACATTACAGGTA
ACATGATGGCAAGTATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCA
GGAAATGACACTATTAACGTTAAGACGATCCTGTTAACTGAACCTCAAAT
CTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGATCCAAGCTTCCTATG
GCGCTGGAAAATCAATCACTTTACACGAAATTGCAAGGAAACTGCTGAAA
ATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCATTCAGTGC
ACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAAA
AATTGACACGAAAACGAGAAAATCTCATCTCTTTATCGCTTTCTGAAGCT
GTTGGTGAAAGAAAGAATGTCACCGATTTTTATAACTGTTCCTCATTACC
ATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAACCAAATACAAAC
ATCGAACATTACATTTCCTCTTTGATGAAGTTCCACAAGAGATGTTCACG
AAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAATTTCGAGA
ATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAA
CCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAATAAGCTCA
GACATGGAACTTTTCAAACTACCAACCACAATAAGGATGAGCAGTTGCTT
ACATAAATTGAACGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCTGCT
CCTTAAACTTAGAAGTTCGATCAAAAGgaAACGTTTTGCTAACAAAAGAC
GAATCTAACAAGGCCATAATCCACGAAACTCAACCAAATGGAGATGGCGA
AAATAGACCAGATGACTCTCAATCGACAACAGAAGTCGAATGTCAGGAAC
CACCAGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCGAATCATTTGAC
CCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAGAC
GAGTGGAAATGAAGAAGTCGTGAAAGAACTGTCCACTACATATACCTATA
TGAAAGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAAAACCACGAATC
TTTCATTTCACCAAAGCTTTCACACCTTTATTTGCTTGGTTCCTTCCGAT
GCTAGCAGCAATCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGATGAAG
TCGTGGTATTATGCGAAGATATCTGTCAAGTACAAATGGTTCAGTATGCC
CTGGAAAGGATACACAAGCGTCCAATTGCATATGCACCTTACCTTACCGG
AGAATATCCTCAAGACATCCACAAGATGAaggaaaaattcatcaaaaatt
tagaCGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGTGGA
TTGGAAATGGCCCATACAATCATCTTTGTGGATCCAGAAAACGAGGCCAA
CGCACATTTTCTCATCGAAGCAATCACACGAACCATAACAAATCTTGATG
TCATTTCAACAAAACCTTTTCCACAAAATCCTTCCACGAGTATCgaaaga
gcttttcaaaaatatgtcgATGGGACTTTAGCTATTAAGACACACGTTGA
ATCAAGCAAAGACGCAGAAGATCTTCTGAAAGTACGATTCCAATACAACA
AAAAGGACGGCTCAcaacaaacaaaaattatttcacagaAATTTACCGAT
TTCAGTTTCGACGTTTCACAATCTCTAgatgattttaacaaaaatgaagA
GCTATGGCAAAACTATTTCAGgAAGGCGTTTACTCTTTCAACTTCCATTT
CATCTTTGGGAACCAACAAATGGGATGGCAAAACCATGGAAAGTGTGACC
TTGAATGATGGAACTACACTCAGTTTTG
Run BLAST on NCBI

protein sequence of TCONS_00023114-protein

>TCONS_00023114-protein ID=TCONS_00023114-protein|Name=TCONS_00023114-protein|organism=Clytia hemisphaerica|type=polypeptide|length=632bp
MENITGNMMASMAQTKIYLPRVSGNDTINVKTILLTEPQISCIESQSNWK
LIQASYGAGKSITLHEIARKLLKMSNQDLIINVTFDPFSALDKKVDHSFN
ELCEQEKLTRKRENLISLSLSEAVGERKNVTDFYNCSSLPSKNIADVMLL
LKTKYKHRTLHFLFDEVPQEMFTKTYSETLRGRLESEFRESVVVIALQSV
QKSRKITEEGKVTNSQEIDLISSDMELFKLPTTIRMSSCLHKLNEVLEGE
IESSPCSLNLEVRSKGNVLLTKDESNKAIIHETQPNGDGENRPDDSQSTT
EVECQEPPAKKRKEDQEASESFDPTKLRDPENVFKSQPQTSGNEEVVKEL
STTYTYMKGKCGHSFMSSLKPRIFHFTKAFTPLFAWFLPMLAAILQFCLN
ERKEDEVVVLCEDICQVQMVQYALERIHKRPIAYAPYLTGEYPQDIHKMK
EKFIKNLDEMETVLISDYRSVRGLEMAHTIIFVDPENEANAHFLIEAITR
TITNLDVISTKPFPQNPSTSIERAFQKYVDGTLAIKTHVESSKDAEDLLK
VRFQYNKKDGSQQTKIISQKFTDFSFDVSQSLDDFNKNEELWQNYFRKAF
TLSTSISSLGTNKWDGKTMESVTLNDGTTLSF
Run BLAST on NCBI

transcript from alignment at sc0000443:244782..251726+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023114 ID=TCONS_00023114|Name=TCONS_00023114|organism=Clytia hemisphaerica|type=transcript|length=6945bp|location=Sequence derived from alignment at sc0000443:244782..251726+ (Clytia hemisphaerica)
TTCCAGTCAATCATCATCATACAAGTAGGAAAGGAGAAACATTAGTCTAC
GCTCATAATTGTGGAAGGCCTACCAATATACACGCATTCGAAGTTTCGGA
CGAGAATGGAATCACAGATGACGATACATGTATCCCAATCAGCACTGGTC
CTTCAGTTGCCAACACTGTCAAAGAATTCAATCAAAGAGCAATGCAGTAT
TACAAAGACCATATCGACGTCAAAACCTTCCCACCCTCGTATTACgtaca
aaatgaaaacattaaagAAGTTATCGCGAGTCTTGAAAAACATTCATCAC
TTCTTGGAGGAAAAATTCTCGTCGGATATAACCCCATAAACCATCTCAGA
ATACTTGGACTCGATTATCAAAAGATTGAGAGTGTTCTGCAATTTTCTGA
AAAGCCTGATCACTATGACAACACAATCGTTTGTATTTATCCCAATCATA
GCTTGATGTTTGTTTACGTGGTTGGTGAAAACGAAAAACATCTTGACAAG
GATTTGGCGAAAGTCAATGCTGTCTTGAAAACATGGTGTTATGTTCACAG
GCAGATTCTCCAAAATGAACAGTTTACTATTGTTGGAGTTCTCGTCTTAC
CGGCTTCAAGCGActtgaacaaaatgtttaagCAACATCCTTGCTTAAAT
CTAAACACAGAGAGTCAGGATTTTGTCATTTCTTACGATAAAAGTTTTGG
ACAGTGGTTAACCAACTTCTTANTGAAGCAGCATCCTTGCTTGAATCTAA
ACACAAAGAGTCAGGACTTTGTCATTTCTTTCGATGAAAACTTTGGACAA
TGGTTGACCAGCTTCTTAAAATTAATCCGGGATAATCGAAAGCTTTCATC
ACCCTCAACACCAGAAGTAATGGAAAATATTACAGGCAACATGATGGCGA
GCATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCAGGAAATGACACT
ATGAACGTTAAGACCNTCATCGCCAGAAATAATGGAAAACATTACAGGTA
ACATGATGGCAAGTATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCA
GGAAATGACACTATTAACGTTAAGACGATCCTGTTAACTGAACCTCAAAT
CTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGATCCAAGCTTCCTATG
GCGCTGGAAAATCAATCACTTTACACGAAATTGCAAGGAAACTGCTGAAA
ATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCATTCAGTGC
ACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAGAAA
AATTGACACGAAAACGAGAAAATCTCATCTCTTTATCGCTTTCTGAAGCT
GTTGGTGAAAGAAAGAATGTCACCGATTTTTATAACTGTTCCTCATTACC
ATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAACCAAATACAAAC
ATCGAACATTACATTTCCTCTTTGATGAAGTTCCACAAGAGATGTTCACG
AAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAATTTCGAGA
ATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAATAA
CCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAATAAGCTCA
GACATGGAACTTTTCAAACTACCAACCACAATAAGGATGAGCAGTTGCTT
ACATAAATTGAACGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCTGCT
CCTTAAACTTAGAAGTTCGATCAAAAGGTATAACATACCATTTACGTAAC
ATTCTTTTATAATCGTGTTCAATTGCAACAGTGTGCAAGTAAAATATGCT
CATTTCCATTTATTAccgaaatattttcttacattttgatttttcaggaA
ACGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACT
CAACCAAATGGAGATGGCGAAAATAGACCAGATGACTCTCAATCGACAAC
AGAAGTCGAATGTCAGGTTACCGAGATATTTTTGTTAACGAGCGCACTGT
TTACAATTAGCTTACCATTGAAATTGAATAATGAAGCTATTATCTCTTTG
TCAGAACCGATCTTTTTAGAAATTCTTCagactgattttttttgattttc
ttttctcaGACTAGGACACTTTTCGTGTTGGATATTACAGCTTATTTTTT
AAAGTCCATTCAAATTATCTTCACCGGATGTAATTTGCTTCTCTATAACT
TGTGAAAAAAAACGTGCTCTCCTTGGCAACACACCCTCCTCATAGACCCG
CTAGCAGGATCTTTCAGGCAGTTGGGGTTAAAATAAAGGACTAAAACTCA
ATTGGGAAGATTGGTTGATATCCCATGTTTAGAGAGAATAGAAAAAGAGA
AGCTgaccctccgatatcatcggaccgggccctattccgggatagtttcc
tacccctagatacggaaatcacagcgcttaccagacattgtactctgtgc
tcgcgacacatcagagccatgctgtatcgatgatgatactcGAACGGCAC
GGGAAAACCTTGCGTTCTCGCAGGTACTGAACATATGAGTACCATCACCA
CTCCACATTCAATGTCCAGCATATCTctccatactcttgtatcagagtaa
tggtaccctATTCCCCTTACATGGTATGGGTTTACCCGGGCCAAGGTACg
ctcacttgccaagtgaattgcagcaccgagtgggaatcgaaccctgacct
ccagcacggaagtcaagaacgatgaccactacactactgcgcatgttttc
gagccagaaaattcagtggggatggaaaaaatagcccaataatattttgc
aatgacgatttgcttatctgatcaTTTTATGGGTGACAAaattataattt
tccactgaggACGATGTTTCATCAATTTATCCAATAAGAAGGGtccctac
cgggtctgtgagaaggaggtaaTTGCCATTGATTCCGAAATCCCGAATTG
ACTAATTCCGAAACTCCTTGATGGGAAGAGAAGCCACTTATTTAAACTgc
agaaagaaaaacaagcatgaattttttaaattgtttttattcacgtcttt
ttttttaagaaactagttttaacaagcagcctcaatgtttcttaagaaat
cggccttttgagccttaaatgtttcttatatgtttctaaactttttgaca
taatcagcctcatggaaggctagactgaaaagttcttaaaaaaccgaatt
taaaaatgttattttctcattctcagcctcagcatgtttttgttagatgt
ttcttagtttttaggcattctgagcctagtgtttcttaaaagtgtgtttc
ttaaaaaaaaaaacgggtaCTAGAttagttccatttatactgagacagaa
aaatcgtctgagacgagtagtttgtaaaaAGTGATCTGCggaggagatcc
tatttattgaaacatgaatggaaagttacactcctccataatgctcattt
tctaaattgctcgtATCAGATAAATTAATCGTCtcacaatcatggacaaa
aggttgtagacaaatgaaatttcagtgaaatatgataagaaatataatag
agcaaaatgactcttcaatgtgtctgaaaaaggagtgaagttaagaaaaa
cacttttgaagtcgttgcattgcttttaaATTGCTTTTGAAGGAACCACC
AGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCGAATCATTTGACCCAA
CGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACAGACGAGT
GGAAATGAAGAAGTCGTGAAAGAACTGTCCACTACATATACCTATATGAA
AGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAAAACCACGAATCTTTC
ATTTCACCAAAGCTTTCACACCTTTATTTGCTTGGTTCCTTCCGATGCTA
GCAGCAATCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGATGAAGTCGT
GGTATTATGCGAAGATATCTGTCAAGTACAAATGGTTCAGTATGCCCTGG
AAAGGATACACAAGCGTCCAATTGCATATGCACCTTACCTTACCGGAGAA
TATCCTCAAGACATCCACAAGATGAaggaaaaattcatcaaaaatttaga
CGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGTGGATTGG
AAATGGCCCATACAATCATCTTTGTGGATCCAGAAAACGAGGCCAACGCA
CATTTTCTCATCGAAGCAATCACACGAACCATAACAAATCTTGATGTCAT
TTCAACAAAACCTTTTCCACAAAATCCTTCCACGAGTATCgaaagagctt
ttcaaaaatatgtcgATGGGACTTTAGCTATTAAGACACACGTTGAATCA
AGCAAAGACGCAGAAGATCTTCTGAAAGTACGATTCCAATACAACAAAAA
GGACGGCTCAcaacaaacaaaaattatttcacagaAATTTACCGATTTCA
GTTTCGACGTTTCACAATCTCTAgatgattttaacaaaaatgaagAGCTA
TGGCAAAACTATTTCAGGTATAatttttctgttgaaattttcaattttta
atgatCTTTATTATTACAAAAAGCTCAATGAGAGGATAAgtcatattttc
caaaattaggcGCCCGCTAATCCTTTAGCCAAATATACTCCAGACTAAaa
aaagtacatatttttttcctttaggAAGGCGTTTACTCTTTCAACTTCCA
TTTCATCTTTGGGAACGTAAGTCAATACAGCTGATGTCCTCTGATTCGGC
ATTCTGTTATTCGACAAGCTCCCATTGTCAATCAACTAACAgtcattttt
gacaaatttcctttaaatttcTCATAAAAGATACCTCATCGGGGAAAAca
tcgtcggggaaaagtgacgaaattttggctaaatgacgaatatttttccc
cgacgaaaattttccccggccttaatgcgtttaccaactaccagcaagtg
acgaatatttttccccgacaaaaagtttccccgacgaagttttccccgat
aaggtacttttTTATCGGACATTCTATCGCTATCATCTTCTTGGGGTTGG
TTTAATTTGAGATTCACGATTTAATCATTCATCGTAATGGACGATTCGCG
ATTCATGTTCCATGCATAAATTATGTTGATCATGCGAAATCATGCTAATC
ATGACAAAATGttttaggcaatttacaaagTTTTATTCGCAGAAACCAAC
GACAAACTCAANGATCATGCGAAATCATGCTAATCATGACAAAATGtttt
aggcaatttacaaagTTTGAAACCAACGacaaactcaattatttttaaaa
acataatttatgtaagattatacaaattatattcaACGAAGCTTTCATTG
CATTCTCCCGACTGTACCATGATCCTtaaggccgctacccactcagcatt
ttatggtgaACAAGGCGCACAGCTTGGGAGCTTTGGTCGCTGAACGCTTT
TCCTATTCCACTGATCCAAAATAAAGGGGAGATGTTctgcacattttttt
cttttttctattgttgatacttttttgcacacggtacaagaaatgtctct
tctgattggctatttaaaaaagaacaatagggaaGCCGCACAGCTTAGCT
tagcgaaaaaagttgaaaagtttcaactcttgttgcgctcaaagcgacag
cctttgaaggcttgatttatgtaatttatgcaataattaagcTGCGCGTC
TTGTTCGcagaccataaaatgctgagtggatAGCGACctttaaaaagaaa
gtaaatcACGTGCAGACACTTTCTGCGCTCTCTTTATTCATATCTGTtct
ttacttcgtacattacggtccgcaaaccatggTGCTGAGAATATTGTTCG
TCagtatattgtgtagtctaagtaatACCCTTAATTAGTTGTAGTTTTAT
TGCTTACTGATTAGTTTTTTGCGTAAATTTACCGTcgtaaacaaaagcga
gaaaagattatgccattgttttggAAATATGTTACATAGTTTAAGTTTTA
TGTAAAATATTAAGGAATAAttagcatactttatgcatgggtCGCGAATC
GTGCATCCTAAATTGTTAGACCGTCCATCTTAAATTGCACCAAACCGTCT
CTCTGGGAGAGTTTTGATTTCTAGCATATGAAAGGGTTTTTGGAATATAG
TATGAACTTTAGACGATCCTATCCTCAACACAATGTCACAACAAAAGGAA
TAATTCGGGAAACgagataaatttgaaataacAGAGTTTAGTTCGGAGGG
TTCGACATTCGTGAAAGATTCCCTATGAAGACTGAATGTTCTATTTCCTC
GATTTTGCAATACTATATAAACTTCAAGTGTAGTAAAAAATTACCCTCGT
TAGCAATGTAATATTCCAATCTccataaattttgtttttgctgtTCTGAA
AGGTAAGtaataagtaagtctgcgaccgcagtcggaggcgacccgaaggc
tcctctttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNgagaggcatcaagtaccattttgggaatct
ttggtatgacccggctgggggttgaacccacaaccttgcgaaccgtagcc
ggatgctctaccactgtactacggtctgAAAGGTAAAGCTTCTATGGATG
ATATATATTAATAATTTCTCTTGCATATAGCAACAAATGGGATGGCAAAA
CCATGGAAAGTGTGACCTTGAATGATGGAACTACACTCAGTTTTG

Coding sequence (CDS) from alignment at sc0000443:244782..251726+

>TCONS_00023114 ID=TCONS_00023114|Name=TCONS_00023114|organism=Clytia hemisphaerica|type=CDS|length=9480bp|location=Sequence derived from alignment at sc0000443:244782..251726+ (Clytia hemisphaerica)
ATGGAAAACATTACAGGTAACATGATGGCAAGTATGGCACAAACCAAAAT
CTACCTTCCTCGTGTTTCAGGAAATGACACTATTAACGTTAAGACGATCC
TGTTAACTGAACCTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAG
CTGATCCAAGCTTCCTATGGCGCTGGAAAATCAATCACTTTACACGAAAT
TGCAAGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTA
CTTTCGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAAC
GAGCTTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTC
TTTATCGCTTTCTGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTT
ATAACTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTC
TTAAAAACCAAATACAAACATCGAACATTACATTTCCTCTTTGATGAAGT
TCCACAAGAGATGTTCACGAAGACCTACTCAGAAACACTACGTGGCCGTT
TGGAGAGTGAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTA
CAGAAATCTCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTCACAGGA
GATTGATTTAATAAGCTCAGACATGGAACTTTTCAAACTACCAACCACAA
TAAGGATGAGCAGTTGCTTACATAAATTGAACGAAGTTTTGGAAGGTGAA
ATCGAAAGTTCGCCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGgaAA
CGTTTTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACTC
AACCAAATGGAGATGGCGAAAATAGACCAGATGACTCTCAATCGACAACA
GAAGTCGAATGTCAGGAACCACCAGCAAAAAAGCGAAAAGAAGATCAAGA
AGCAAGCGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTT
TTAAGTCGCAGCCACAGACGAGTGGAAATGAAGAAGTCGTGAAAGAACTG
TCCACTACATATACCTATATGAAAGGGAAATGTGGGCATTCTTTCATGAG
CTCCTTAAAACCACGAATCTTTCATTTCACCAAAGCTTTCACACCTTTAT
TTGCTTGGTTCCTTCCGATGCTAGCAGCAATCCTCCAGTTCTGTTTGAAT
GAGAGAAAGGAGGATGAAGTCGTGGTATTATGCGAAGATATCTGTCAAGT
ACAAATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCAT
ATGCACCTTACCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAag
gaaaaattcatcaaaaatttagaCGAGATGGAGACAGTTCTGATATCCGA
TTATCGGTCTGTTCGTGGATTGGAAATGGCCCATACAATCATCTTTGTGG
ATCCAGAAAACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGA
ACCATAACAAATCTTGATGTCATTTCAACAAAACCTTTTCCACAAAATCC
TTCCACGAGTATCgaaagagcttttcaaaaatatgtcgATGGGACTTTAG
CTATTAAGACACACGTTGAATCAAGCAAAGACGCAGAAGATCTTCTGAAA
GTACGATTCCAATACAACAAAAAGGACGGCTCAcaacaaacaaaaattat
ttcacagaAATTTACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatg
attttaacaaaaatgaagAGCTATGGCAAAACTATTTCAGgAAGGCGTTT
ACTCTTTCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAA
AACCATGGAAAGTGTGACCTTGAATGATGGAACTACACTCAGTTTTATGG
AAAACATTACAGGTAACATGATGGCAAGTATGGCACAAACCAAAATCTAC
CTTCCTCGTGTTTCAGGAAATGACACTATTAACGTTAAGACGATCCTGTT
AACTGAACCTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGA
TCCAAGCTTCCTATGGCGCTGGAAAATCAATCACTTTACACGAAATTGCA
AGGAAACTGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTT
CGACCCATTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGC
TTTGTGAACAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTCTTTA
TCGCTTTCTGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTTATAA
CTGTTCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAA
AAACCAAATACAAACATCGAACATTACATTTCCTCTTTGATGAAGTTCCA
CAAGAGATGTTCACGAAGACCTACTCAGAAACACTACGTGGCCGTTTGGA
GAGTGAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGA
AATCTCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATT
GATTTAATAAGCTCAGACATGGAACTTTTCAAACTACCAACCACAATAAG
GATGAGCAGTTGCTTACATAAATTGAACGAAGTTTTGGAAGGTGAAATCG
AAAGTTCGCCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGgaAACGTT
TTGCTAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACTCAACC
AAATGGAGATGGCGAAAATAGACCAGATGACTCTCAATCGACAACAGAAG
TCGAATGTCAGGAACCACCAGCAAAAAAGCGAAAAGAAGATCAAGAAGCA
AGCGAATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAA
GTCGCAGCCACAGACGAGTGGAAATGAAGAAGTCGTGAAAGAACTGTCCA
CTACATATACCTATATGAAAGGGAAATGTGGGCATTCTTTCATGAGCTCC
TTAAAACCACGAATCTTTCATTTCACCAAAGCTTTCACACCTTTATTTGC
TTGGTTCCTTCCGATGCTAGCAGCAATCCTCCAGTTCTGTTTGAATGAGA
GAAAGGAGGATGAAGTCGTGGTATTATGCGAAGATATCTGTCAAGTACAA
ATGGTTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATATGC
ACCTTACCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAaggaaa
aattcatcaaaaatttagaCGAGATGGAGACAGTTCTGATATCCGATTAT
CGGTCTGTTCGTGGATTGGAAATGGCCCATACAATCATCTTTGTGGATCC
AGAAAACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAACCA
TAACAAATCTTGATGTCATTTCAACAAAACCTTTTCCACAAAATCCTTCC
ACGAGTATCgaaagagcttttcaaaaatatgtcgATGGGACTTTAGCTAT
TAAGACACACGTTGAATCAAGCAAAGACGCAGAAGATCTTCTGAAAGTAC
GATTCCAATACAACAAAAAGGACGGCTCAcaacaaacaaaaattatttca
cagaAATTTACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatgattt
taacaaaaatgaagAGCTATGGCAAAACTATTTCAGgAAGGCGTTTACTC
TTTCAACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACC
ATGGAAAGTGTGACCTTGAATGATGGAACTACACTCAGTTTTATGGAAAA
CATTACAGGTAACATGATGGCAAGTATGGCACAAACCAAAATCTACCTTC
CTCGTGTTTCAGGAAATGACACTATTAACGTTAAGACGATCCTGTTAACT
GAACCTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGATCCA
AGCTTCCTATGGCGCTGGAAAATCAATCACTTTACACGAAATTGCAAGGA
AACTGCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGAC
CCATTCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTTG
TGAACAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTCTTTATCGC
TTTCTGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTTATAACTGT
TCCTCATTACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAAC
CAAATACAAACATCGAACATTACATTTCCTCTTTGATGAAGTTCCACAAG
AGATGTTCACGAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGT
GAATTTCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATC
TCGAAAAATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATT
TAATAAGCTCAGACATGGAACTTTTCAAACTACCAACCACAATAAGGATG
AGCAGTTGCTTACATAAATTGAACGAAGTTTTGGAAGGTGAAATCGAAAG
TTCGCCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGgaAACGTTTTGC
TAACAAAAGACGAATCTAACAAGGCCATAATCCACGAAACTCAACCAAAT
GGAGATGGCGAAAATAGACCAGATGACTCTCAATCGACAACAGAAGTCGA
ATGTCAGGAACCACCAGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCG
AATCATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCG
CAGCCACAGACGAGTGGAAATGAAGAAGTCGTGAAAGAACTGTCCACTAC
ATATACCTATATGAAAGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAA
AACCACGAATCTTTCATTTCACCAAAGCTTTCACACCTTTATTTGCTTGG
TTCCTTCCGATGCTAGCAGCAATCCTCCAGTTCTGTTTGAATGAGAGAAA
GGAGGATGAAGTCGTGGTATTATGCGAAGATATCTGTCAAGTACAAATGG
TTCAGTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATATGCACCT
TACCTTACCGGAGAATATCCTCAAGACATCCACAAGATGAaggaaaaatt
catcaaaaatttagaCGAGATGGAGACAGTTCTGATATCCGATTATCGGT
CTGTTCGTGGATTGGAAATGGCCCATACAATCATCTTTGTGGATCCAGAA
AACGAGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAACCATAAC
AAATCTTGATGTCATTTCAACAAAACCTTTTCCACAAAATCCTTCCACGA
GTATCgaaagagcttttcaaaaatatgtcgATGGGACTTTAGCTATTAAG
ACACACGTTGAATCAAGCAAAGACGCAGAAGATCTTCTGAAAGTACGATT
CCAATACAACAAAAAGGACGGCTCAcaacaaacaaaaattatttcacaga
AATTTACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatgattttaac
aaaaatgaagAGCTATGGCAAAACTATTTCAGgAAGGCGTTTACTCTTTC
AACTTCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACCATGG
AAAGTGTGACCTTGAATGATGGAACTACACTCAGTTTTATGGAAAACATT
ACAGGTAACATGATGGCAAGTATGGCACAAACCAAAATCTACCTTCCTCG
TGTTTCAGGAAATGACACTATTAACGTTAAGACGATCCTGTTAACTGAAC
CTCAAATCTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGATCCAAGCT
TCCTATGGCGCTGGAAAATCAATCACTTTACACGAAATTGCAAGGAAACT
GCTGAAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCAT
TCAGTGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTTGTGAA
CAAGAAAAATTGACACGAAAACGAGAAAATCTCATCTCTTTATCGCTTTC
TGAAGCTGTTGGTGAAAGAAAGAATGTCACCGATTTTTATAACTGTTCCT
CATTACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAACCAAA
TACAAACATCGAACATTACATTTCCTCTTTGATGAAGTTCCACAAGAGAT
GTTCACGAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAAT
TTCGAGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGA
AAAATAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAAT
AAGCTCAGACATGGAACTTTTCAAACTACCAACCACAATAAGGATGAGCA
GTTGCTTACATAAATTGAACGAAGTTTTGGAAGGTGAAATCGAAAGTTCG
CCCTGCTCCTTAAACTTAGAAGTTCGATCAAAAGgaAACGTTTTGCTAAC
AAAAGACGAATCTAACAAGGCCATAATCCACGAAACTCAACCAAATGGAG
ATGGCGAAAATAGACCAGATGACTCTCAATCGACAACAGAAGTCGAATGT
CAGGAACCACCAGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCGAATC
ATTTGACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGC
CACAGACGAGTGGAAATGAAGAAGTCGTGAAAGAACTGTCCACTACATAT
ACCTATATGAAAGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAAAACC
ACGAATCTTTCATTTCACCAAAGCTTTCACACCTTTATTTGCTTGGTTCC
TTCCGATGCTAGCAGCAATCCTCCAGTTCTGTTTGAATGAGAGAAAGGAG
GATGAAGTCGTGGTATTATGCGAAGATATCTGTCAAGTACAAATGGTTCA
GTATGCCCTGGAAAGGATACACAAGCGTCCAATTGCATATGCACCTTACC
TTACCGGAGAATATCCTCAAGACATCCACAAGATGAaggaaaaattcatc
aaaaatttagaCGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGT
TCGTGGATTGGAAATGGCCCATACAATCATCTTTGTGGATCCAGAAAACG
AGGCCAACGCACATTTTCTCATCGAAGCAATCACACGAACCATAACAAAT
CTTGATGTCATTTCAACAAAACCTTTTCCACAAAATCCTTCCACGAGTAT
CgaaagagcttttcaaaaatatgtcgATGGGACTTTAGCTATTAAGACAC
ACGTTGAATCAAGCAAAGACGCAGAAGATCTTCTGAAAGTACGATTCCAA
TACAACAAAAAGGACGGCTCAcaacaaacaaaaattatttcacagaAATT
TACCGATTTCAGTTTCGACGTTTCACAATCTCTAgatgattttaacaaaa
atgaagAGCTATGGCAAAACTATTTCAGgAAGGCGTTTACTCTTTCAACT
TCCATTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACCATGGAAAG
TGTGACCTTGAATGATGGAACTACACTCAGTTTTATGGAAAACATTACAG
GTAACATGATGGCAAGTATGGCACAAACCAAAATCTACCTTCCTCGTGTT
TCAGGAAATGACACTATTAACGTTAAGACGATCCTGTTAACTGAACCTCA
AATCTCCTGCATCGAAAGCCAGTCAAATTGGAAGCTGATCCAAGCTTCCT
ATGGCGCTGGAAAATCAATCACTTTACACGAAATTGCAAGGAAACTGCTG
AAAATGAGCAACCAAGACTTGATTATAAACGTTACTTTCGACCCATTCAG
TGCACTAGATAAGAAAGTCGACCATTCATTTAACGAGCTTTGTGAACAAG
AAAAATTGACACGAAAACGAGAAAATCTCATCTCTTTATCGCTTTCTGAA
GCTGTTGGTGAAAGAAAGAATGTCACCGATTTTTATAACTGTTCCTCATT
ACCATCCAAAAATATTGCTGACGTCATGCTTCTCTTAAAAACCAAATACA
AACATCGAACATTACATTTCCTCTTTGATGAAGTTCCACAAGAGATGTTC
ACGAAGACCTACTCAGAAACACTACGTGGCCGTTTGGAGAGTGAATTTCG
AGAATCAGTTGTCGTGATTGCCCTCCAAAGTGTACAGAAATCTCGAAAAA
TAACCGAGGAAGGCAAGGTCACCAATTCACAGGAGATTGATTTAATAAGC
TCAGACATGGAACTTTTCAAACTACCAACCACAATAAGGATGAGCAGTTG
CTTACATAAATTGAACGAAGTTTTGGAAGGTGAAATCGAAAGTTCGCCCT
GCTCCTTAAACTTAGAAGTTCGATCAAAAGgaAACGTTTTGCTAACAAAA
GACGAATCTAACAAGGCCATAATCCACGAAACTCAACCAAATGGAGATGG
CGAAAATAGACCAGATGACTCTCAATCGACAACAGAAGTCGAATGTCAGG
AACCACCAGCAAAAAAGCGAAAAGAAGATCAAGAAGCAAGCGAATCATTT
GACCCAACGAAGCTACGCGACCCCGAAAACGTTTTTAAGTCGCAGCCACA
GACGAGTGGAAATGAAGAAGTCGTGAAAGAACTGTCCACTACATATACCT
ATATGAAAGGGAAATGTGGGCATTCTTTCATGAGCTCCTTAAAACCACGA
ATCTTTCATTTCACCAAAGCTTTCACACCTTTATTTGCTTGGTTCCTTCC
GATGCTAGCAGCAATCCTCCAGTTCTGTTTGAATGAGAGAAAGGAGGATG
AAGTCGTGGTATTATGCGAAGATATCTGTCAAGTACAAATGGTTCAGTAT
GCCCTGGAAAGGATACACAAGCGTCCAATTGCATATGCACCTTACCTTAC
CGGAGAATATCCTCAAGACATCCACAAGATGAaggaaaaattcatcaaaa
atttagaCGAGATGGAGACAGTTCTGATATCCGATTATCGGTCTGTTCGT
GGATTGGAAATGGCCCATACAATCATCTTTGTGGATCCAGAAAACGAGGC
CAACGCACATTTTCTCATCGAAGCAATCACACGAACCATAACAAATCTTG
ATGTCATTTCAACAAAACCTTTTCCACAAAATCCTTCCACGAGTATCgaa
agagcttttcaaaaatatgtcgATGGGACTTTAGCTATTAAGACACACGT
TGAATCAAGCAAAGACGCAGAAGATCTTCTGAAAGTACGATTCCAATACA
ACAAAAAGGACGGCTCAcaacaaacaaaaattatttcacagaAATTTACC
GATTTCAGTTTCGACGTTTCACAATCTCTAgatgattttaacaaaaatga
agAGCTATGGCAAAACTATTTCAGgAAGGCGTTTACTCTTTCAACTTCCA
TTTCATCTTTGGGAACCAACAAATGGGATGGCAAAACCATGGAAAGTGTG
ACCTTGAATGATGGAACTACACTCAGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012989XLOC_012989Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023114-exon-sc0000443-1491911889:244782..246558TCONS_00023114-exon-sc0000443-1491911889:244782..246558Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1510915933:244782..246558TCONS_00023114-exon-sc0000443-1510915933:244782..246558Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1575043694:244782..246558TCONS_00023114-exon-sc0000443-1575043694:244782..246558Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1491911889:246679..246797TCONS_00023114-exon-sc0000443-1491911889:246679..246797Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1510915933:246679..246797TCONS_00023114-exon-sc0000443-1510915933:246679..246797Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1575043694:246679..246797TCONS_00023114-exon-sc0000443-1575043694:246679..246797Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1491911889:248474..249348TCONS_00023114-exon-sc0000443-1491911889:248474..249348Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1510915933:248474..249348TCONS_00023114-exon-sc0000443-1510915933:248474..249348Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1575043694:248474..249348TCONS_00023114-exon-sc0000443-1575043694:248474..249348Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1491911889:249506..249547TCONS_00023114-exon-sc0000443-1491911889:249506..249547Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1510915933:249506..249547TCONS_00023114-exon-sc0000443-1510915933:249506..249547Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1575043694:249506..249547TCONS_00023114-exon-sc0000443-1575043694:249506..249547Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1491911889:251662..251726TCONS_00023114-exon-sc0000443-1491911889:251662..251726Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1510915933:251662..251726TCONS_00023114-exon-sc0000443-1510915933:251662..251726Clytia hemisphaericaexon
TCONS_00023114-exon-sc0000443-1575043694:251662..251726TCONS_00023114-exon-sc0000443-1575043694:251662..251726Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023114-proteinTCONS_00023114-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000443supercontigsc0000443:244782..251726 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.99737e-05	3.22899e-05	1.48576e-05	0	0.000283906	5.58245e-07	0	1.47522	0.58536	0.679792	1.47598	0.725271	4.36646	3.19488	2.40746	4.89239	2.77003	3.98786	4.67709	7.44404	3.10953	2.8269e-06	3.47476	3.88354	4.66554	6.28715	10.5274	14.8377	14.808	11.6631
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023114 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top