TCONS_00023447 (transcript) - C. hemisphaerica

Overview
NameTCONS_00023447
Unique NameTCONS_00023447
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1931

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00023447 ID=TCONS_00023447|Name=TCONS_00023447|organism=Clytia hemisphaerica|type=transcript|length=1931bp
tcttacaaaaaacgtaTATAatagaaaacaaacaaaaatatccATCAAAG
TCGAAACAATATAACTATATTAACCCTATTGTTGGCATAGCTTCTTTTAT
GAGTTGTTCTGGTCCGGAAAATATATGGTTTAGTGATGATATACGACTGA
CGGATGACATAGAGAATGACGCGCGGCATAAGAACAATAgcttcataaaa
aaataaacaatatagACAAAGAGAAAGACGTCTCAATTTTGAATATAGCT
ACAATTGCAAGAAAGTTGTATTTGAGAAATTAATTAATGGCTGATTACCT
TGCGGTTAACATTTAATTACATACAAGCAAATATAAACGAGCTCCATTCG
ATAAACTGGATATTCATTCTTTGATCAACCAACGGTCGCCAGACATTGTC
CATAGGAAATCaagaaaagtcttttttattaTCACCATCATTTATTTATT
AATATTTGTCGTGGAAATCAGTGAATAAATTAGTTGAACATCCATCGATT
ATCAACAGTTGTAATCAAGTAGCTCACGGAGTAACATCAAATCTTGATTT
GGAAATTTGTCATCGAATTATATCACACGTTACCATATATTGTATACAGC
TTTGAGAATCAACTCTTTGGTTAACACCATCAACAATTTATACTCAGCAA
CAACGCAACAAAATGCACATGTCAGTAGAAAGCCAACCAATGAACAAAAG
GCATAGTCCTTTCTTCGTCAAAGACATTTTGGGTTTGAGCGATGAATCAG
AGAATGAAAGTGACCAAGCAATGGATAGTGGCGATGACCAGAGCTTCAGA
GAAAGCAGTACTGAAGAAAGCTTAGAAAATTTGGATGACGCTTCATGCGG
CAAAAAGACAAGACAATGTTTCACATCCAAACAAGTTGAAGAACTAGAAA
GGCTTTTCAATGAAACCAACTACCCTGATGCATACACCCGACAGATGCTT
GCAAAACGAATGAACGTCTCTGAAACCAGAATTCAGATCTGGTGCCAAAA
CAGACGTGCAAAATTACGGCGACAAAGAAAACAACGAAAACCAATGCTCC
ATGGATTGAGTAGTCCACATAGTTGTTATTACCCATCAAGTGGTGCATGG
TTACAACCTCATATCAACTCAATGTTACCTTTCCCTGTTCTACCTTCGCC
ACCACACAGATCACCAGTCCATTCACCTCTCTCATTTGATTCACCATCAA
GACATTGTTCTTCTTACAGATCTGAATGCAACAAGGATGATATCTGTTTA
CATAGAGACTTAATTCGTGCAAAACACGATTACCATGACCTTGAGTATGG
AAGAATCAGAAGTTACACTCGATAGATGATTCGTGGAGAAAGTATGGTGA
TCTTGGATGGAGAAGAGAGGTCAGAAGATCTACTTAATAGACAATGCAAT
GGATATACATTTGTGACTTAAATTCAGATTTCGGCAGACTTGTAAATATA
GTTTTTGTGTAAATAAGTTTTTTTGTAATGCCGATTGAAGAATAATATTG
AAATAATTAGGACAAGGAATTTGGGGGATTAGAATTATAATTGTTGGCTT
TTAATTGGCGTTGTTCCTCAATTAGAATGTCTGAAAACATAGGTGACCAA
CGGGGTTACGTTTTCCCCGGATTCCTGTCCGATTCTGAACAAAAAAGTCC
AggatttccaatgaaataatTGCTCAACGGAAAAGCTTTTATTTGAATAT
TATGATATTGATATTTTATTATTAGAATATTTTATACCCACATAGAGTGA
TGGAGACAtacaaaagatatatttttttttggaaatagtaTTTTCGATGC
AGGTTCACATCAagataaaatattattttctatagacaaagaagagaaaa
gagagagagaattttatatttaagatttttatttaaaatagataattaca
ttttcaaaagataatgcaaaaatataaattg
Run BLAST on NCBI

protein sequence of TCONS_00023447-protein

>TCONS_00023447-protein ID=TCONS_00023447-protein|Name=TCONS_00023447-protein|organism=Clytia hemisphaerica|type=polypeptide|length=220bp
MHMSVESQPMNKRHSPFFVKDILGLSDESENESDQAMDSGDDQSFRESST
EESLENLDDASCGKKTRQCFTSKQVEELERLFNETNYPDAYTRQMLAKRM
NVSETRIQIWCQNRRAKLRRQRKQRKPMLHGLSSPHSCYYPSSGAWLQPH
INSMLPFPVLPSPPHRSPVHSPLSFDSPSRHCSSYRSECNKDDICLHRDL
IRAKHDYHDLEYGRIRSYTR
Run BLAST on NCBI

transcript from alignment at sc0000454:158834..165090+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00023447 ID=TCONS_00023447|Name=TCONS_00023447|organism=Clytia hemisphaerica|type=transcript|length=6257bp|location=Sequence derived from alignment at sc0000454:158834..165090+ (Clytia hemisphaerica)
tcttacaaaaaacgtaTATAatagaaaacaaacaaaaatatccATCAAAG TCGAAACAATATAACTATATTAACCCTATTGTTGGCATAGCTTCTTTTAT GAGTTGTTCTGGTCCGGAAAATATATGGTTTAGTGATGATATACGACTGA CGGATGACATAGAGAATGACGCGCGGCATAAGAACAATAgcttcataaaa aaataaacaatatagACAAAGAGAAAGACGTCTCAATTTTGAATATAGCT ACAATTGCAAGAAAGTTGTATTTGAGAAATTAATTAATGGCTGATTACCT TGCGGTTAACATTTAATTACATACAAGCAAATATAAACGAGCTCCATTCG ATAAACTGGATATTCATTCTTTGATCAACCAACGGTCGCCAGACATTGTC CATAGGAAATCaagaaaagtcttttttattaTCACCATCATTTATTTATT AATATTTGTCGTGGAAATCAGTGAATAAATTAGTTGAACATCCATCGATT ATCAACAGTTGTAATCAAGTAGCTCACGGAGTAACATCAAATCTTGATTT GGAAATTTGTCATCGAATTATATCACACGTTACCATATATTGTATACAGC TTTGAGAATCAACTCTTTGGTTAACACCATCAACAATTTATACTCAGCAA CAACGCAACAAAATGCACATGTCAGTAGAAAGCCAACCAATGAACAAAAG GCATAGTCCTTTCTTCGTCAAAGACATTTTGGGTTTGAGCGATGAATCAG AGAATGAAAGTGACCAAGCAATGGATAGTGGCGATGACCAGAGCTTCAGA GAAAGCAGTACTGAAGAAAGCTTAGAAAATTGTAAGTAGTTTCTCTTCTT ATGTTGgtcaaaacaacgttttttCTATTATTCCTTACGTCGTTTACGAC AGGTTCTCAATTGTTCGATTAATCGATTTTCACGCCCTTTGAGAGAGTTA CAGAGAGTCTAATTTTGTTGGaatcagaaatttcaaaatcagttTATTTT GAACCGTCTTATTTTACATTTCCCAAGTTTGATTGAAGTTTGAATAAAGA TAAATCTTGATCCGAAAAAGCGGCAATAAACCTTCTATTCAAAACATAAG GCGCTGAAACGAGGTTTATTTCTTAAGTTTCCTTCCCGATAAAAACTAGG GTTAAGCTGCTATCTTTAGAAGGGTTttgttccttgtttacttttttgaa tCACAACCGCAATTTCTGATAAAACCTCTTTAAAATAGGATATTACTTAT TTGTTTATATTCGGTAAAATAAGCAATTCATTGACCTCTTCAGTCAAGTA CCTAGataaacaaactattttttttttttgaactttgcATGCTACTTCCT ATATAGTACTAGGACTTTACAGTAATTGCGATGACAAAatggtgattttt ttctcattcattGATAAAAATTATGATTCCACTATCCATTCATGGTTTCC AAAAATTATAAGTTTTCGGTGAAATTGACACTGTTCAATTTTTAAACGAT GCCATGTTAATCTAAATCATCGATAAGAGATAGAGAATTCTGATTTGTCG AATTGACATTTTTCGTCCGGAAAATACGTAaattaaaaatcttcttaaTC ATCAAATTTGTATCATGTGTTATCaagaataatttttccaaaaaagtgac GTTTCTCATAAATTTACCATGATTCAGAGAGTGATTTGAGAAGAGTTTAA TTTCCTATAGTAATTTGTGACAGCCCCCactttaataaataaaaacaaaa acaccatTGACGTGGGTATAAACgcaattttatttgatttttccgAGATC AATCAATATAGAAAAGTTAATCACTTTGGGAAAGTTGGGTGATGAGCCAA GAAATAGGAAAAAGTTCTTCGTTTGAGGATAAACCACATTCTAAGCAGGA ATTTACGTCATTGACTGGTCAGGCTATACTTTTGGACATTTTTCAGGTTT AAATCATCATAACGAAACAATTAATAACATATACTATTTAGGTACAAAAT ATTTTCTAGGTAAAACTTTTGAGTCTAAAAgggaaaattgaagaaaaaaa attttgttattgtttcttTTAATTTCATAATAAGTTATTGTATTGTAAGT TCAACATTTTCGGACACGCTGTCCGgatattgaaaaattatttcaaaaac gattgattcaatatttcaatcaaacaaTCAATAAAAAGGGAACTAACTTG AACAATGCCAATATCTCAAGAAGGAAAATACACGTATTATAGCCTGTACG CTATTGTTAGTTGGCTTACTATATATTAACGAACGGAGGCTAAACAGGCA ATCATTAAACCCTTGTTGGAAAGGAATTCTGGATATAGAATCATAAAAGA AAATTGCCAGTTCTGGCGTCAATGACGTCaaacttctttttattgaaaag gatGACGggaagtttaaaaaaaagtcgTAACTAACGACATACCAATTGTC GGCGATCGGTCGATTCAATGTTTATTTTGATTGGTCACttgttgtatttt tcaaaatggtagacaaagatGTGATTGACGTCAAAAGGATTTCACATCTA AGTGTTTCActctaacattttcaaaaatgaggTAAAAAGAGAGGCGGTGG GTGATTTTCACCACCCATAGACcaataacaataacaaaatattaCCAATT AACTATTCAATAGATTAAAGGATATATCAATTGCAATTTGCAACTCAGTA CAAATTGGCAATGTATATCGCACTTAAGCTCAACACACAGAAATCATTCA AAGATTTTAAATGATGAAAAGCGTCCCGTCCAACTTTTGCAATATCGCAC TGCTATGATAAACATTTTCGATACAACTCGTTCCAATTTCCGTATCTTAT AGAAAAGTTAGTCCCATGACTGTTTAGTTTCTCAATAGCAGATAAGCTCT GAATACTTGTTGACGACACATGCAGACAACTATCGGGAGCTGTCAAAGAC CTAATGTTGCATTGATTCTTTATGTCGCTTGCGATTGAGGATAATTTGCT GGTATTGAATTCAAATGATCCTTTTTTTGTAAAGAGCATTTTTCTAACGG TCTTGTTGATtgatatattttaatttttaaaaagcaGCGTTATAAGTCGA TATAATGAGTTGGACGGAAATGAAATAATTGCAGAATGCTCGTTTGTGAT TCGCCTCTTCTCTTACGCTGGCTGAATCACAACCTCTTCCCACTATAAGA ACAATATAGATTAcgattttgaaatacttttaaaactttaattttaataa ttttattaaaaaatacattcgAACAATCAATTTAAAATTCGAACTACATT GTTATCAAGATTAATTAAGCTATTAAGATAAAGATAAGAACATATTGGGA acagaaaatatttcttttaagaacattttctcGTAATAATTGATTTGTCT TCTTATCTAAACGaagattgttgtttttctttttttattgttccgATGCT TCATTTGACGTCATTCATTTCTCGTCCCAGTTTCCTTCTTGTTCGTATCA ATTTTCAAatgcttttgtttttgttatgaAATTACAAATCCTCTTCAATA TCCTCTAAATGATAATACCTCTCCTAAATTACCAGGTTTCTATATAAGAT TTGACCTCGTTTTCATATTGTTTAAGGAAAACATAGTATCCTTTTCTTGG GATGAAAATTGAAAGAGCTCATTATATAATTTGGATATTAATTTGACAAA TTGACAGTGTAGAAATTAGCATATATCTCTGTATTTTTTTGTGGTTTCAG AAAAATTGCATCTGCTAATACCTTGCAATAAGCATTCATCATCCCACTCA AAATGTATAAGATTTACCACACCGCAATATAGAATTCAGTGTGTATCTTA TACCACATCTTGTGTTTTTCAAAGTAACACTTGACATTCAAAAACAGTGT CATTAAAAAAACCACAATCGTTTCATTACATAaacatcaacaatcaatga agACCTCATTCATTGTATTGATTTGTGTAATTGATTATTGCGAGCACCTT ATTCAGAGCATTCAAACCCACGTACAAAACCAAAATCTCCCTTAAATAAA TGTTTCAGAATAACGGCCACACGTACTAATGGCGTACTAGATTATAACCT TAAATTGCATATAATGAGAAATTAATGACCTGAAAGGCTTGGAAGGAGGA GgctttcaaaattcaaacttcAATTAAACAAATATCTAAGCTTTGACTAA ACTATGTTTGTATTTTTTCCAATTGACNTTTTTAGAAAAAATAGTATCCT TTTCTTGGGATGAAAATTGAAAGAGCTCATTATATAATTTTAATATTAAT TTGACAAATTGACAGTGTAGAAATTAGCATAAATCTCTGTATTTTTTTGT GGTTTCAGAAAAATTGCATCTGCTAATACCTTGCAATAAGCATTCATCAT CCCACTCAAAATGTATAAGATTTACCACACCGCAATATGGAATTCAGTGT GTATCTTATACCACATCTTGTGTTTTTCAAAGTAACACTCGACATTCAAA AACAGTGTCATTAAAGAAACCACAATCATTTCATTACATAaacatcaaca atcaatgaagACCTCATTCATTGTATTGATTTGTGTCATTGATTATTGCG AGCACCTTATTCAGAGCATTCAAACCCACGTACAAAACCAAAATCTCCCT TAAATAAATGTTTCAGAATAACGGCCACACGTACTAATGGCGTACTAGAT TATAACCTTAAATTGCATATAATGAGAAATTAATGACCTGAAAGGCTTGG ANTGTACAAGATTATAACCTTAAATTGCATATAATGAGAAATTAATGACC TGAAAGGCTTGGAAGGAGGAGgctttcaaaattcaaacttcAATTAAACA AACATCTAAGCTTTGACTAAACTATGTTTGTATTTTTTCCAATTGACTAA ATATTTGTTGactctttcctttttctttttacagTGGATGACGCTTCATG CGGCAAAAAGACAAGACAATGTTTCACATCCAAACAAGTTGAAGAACTAG AAAGGCTTTTCAATGAAACCAACTACCCTGATGCATACACCCGACAGATG CTTGCAAAACGAATGAACGTCTCTGAAACCAGAATTCAGGTAATTGcttt atttcgaaaaaaatttcattaattttagtttttctCTCTTCAAACAACTC ATAATGTTTATAATCTTTAGTATATTCTATTGTGTTTTCTATAGAAAGTT ACTAATAAATAAAATCTCTAAAAGTCAAATAaagaaagtaaaattaaaat tgattcgTTTTCTTAAAATAACTCTATAACTtatttaatcaaattttatc attttttattagATCTGGTGCCAAAACAGACGTGCAAAATTACGGCGACA AAGAAAACAACGAAAACCAATGCTCCATGGATTGAGTAGTCCACATAGTT GTTATTACCCATCAAGTGGTGCATGGTTACAACCTCATATCAACTCAATG TTACCTTTCCCTGTTCTACCTTCGCCACCACACAGATCACCAGTCCATTC ACCTCTCTCATTTGATTCACCATCAAGACATTGTTCTTCTTACAGATCTG AATGCAACAAGGATGATATCTGTTTACATAGAGACTTAATTCGTGCAAAA CACGATTACCATGACCTTGAGTATGGAAGAATCAGAAGTTACACTCGATA GATGATTCGTGGAGAAAGTATGGTGATCTTGGATGGAGAAGAGAGGTCAG AAGATCTACTTAATAGACAATGCAATGGATATACATTTGTGACTTAAATT CAGATTTCGGCAGACTTGTAAATATAGTTTTTGTGTAAATAAGTTTTTTT GTAATGCCGATTGAAGAATAATATTGAAATAATTAGGACAAGGAATTTGG GGGATTAGAATTATAATTGTTGGCTTTTAATTGGCGTTGTTCCTCAATTA GAATGTCTGAAAACATAGGTGACCAACGGGGTTACGTTTTCCCCGGATTC CTGTCCGATTCTGAACAAAAAAGTCCAggatttccaatgaaataatTGCT CAACGGAAAAGCTTTTATTTGAATATTATGATATTGATATTTTATTATTA GAATATTTTATACCCACATAGAGTGATGGAGACAtacaaaagatatattt ttttttggaaatagtaTTTTCGATGCAGGTTCACATCAagataaaatatt attttctatagacaaagaagagaaaagagagagagaattttatatttaag atttttatttaaaatagataattacattttcaaaagataatgcaaaaata taaattg

Coding sequence (CDS) from alignment at sc0000454:158834..165090+

>TCONS_00023447 ID=TCONS_00023447|Name=TCONS_00023447|organism=Clytia hemisphaerica|type=CDS|length=1989bp|location=Sequence derived from alignment at sc0000454:158834..165090+ (Clytia hemisphaerica)
ATGCACATGTCAGTAGAAAGCCAACCAATGAACAAAAGGCATAGTCCTTT
CTTCGTCAAAGACATTTTGGGTTTGAGCGATGAATCAGAGAATGAAAGTG
ACCAAGCAATGGATAGTGGCGATGACCAGAGCTTCAGAGAAAGCAGTACT
GAAGAAAGCTTAGAAAATTTGGATGACGCTTCATGCGGCAAAAAGACAAG
ACAATGTTTCACATCCAAACAAGTTGAAGAACTAGAAAGGCTTTTCAATG
AAACCAACTACCCTGATGCATACACCCGACAGATGCTTGCAAAACGAATG
AACGTCTCTGAAACCAGAATTCAGATCTGGTGCCAAAACAGACGTGCAAA
ATTACGGCGACAAAGAAAACAACGAAAACCAATGCTCCATGGATTGAGTA
GTCCACATAGTTGTTATTACCCATCAAGTGGTGCATGGTTACAACCTCAT
ATCAACTCAATGTTACCTTTCCCTGTTCTACCTTCGCCACCACACAGATC
ACCAGTCCATTCACCTCTCTCATTTGATTCACCATCAAGACATTGTTCTT
CTTACAGATCTGAATGCAACAAGGATGATATCTGTTTACATAGAGACTTA
ATTCGTGCAAAACACGATTACCATGACCTTGAGTATGGAAGAATCAGAAG
TTACACTCGATAGATGCACATGTCAGTAGAAAGCCAACCAATGAACAAAA
GGCATAGTCCTTTCTTCGTCAAAGACATTTTGGGTTTGAGCGATGAATCA
GAGAATGAAAGTGACCAAGCAATGGATAGTGGCGATGACCAGAGCTTCAG
AGAAAGCAGTACTGAAGAAAGCTTAGAAAATTTGGATGACGCTTCATGCG
GCAAAAAGACAAGACAATGTTTCACATCCAAACAAGTTGAAGAACTAGAA
AGGCTTTTCAATGAAACCAACTACCCTGATGCATACACCCGACAGATGCT
TGCAAAACGAATGAACGTCTCTGAAACCAGAATTCAGATCTGGTGCCAAA
ACAGACGTGCAAAATTACGGCGACAAAGAAAACAACGAAAACCAATGCTC
CATGGATTGAGTAGTCCACATAGTTGTTATTACCCATCAAGTGGTGCATG
GTTACAACCTCATATCAACTCAATGTTACCTTTCCCTGTTCTACCTTCGC
CACCACACAGATCACCAGTCCATTCACCTCTCTCATTTGATTCACCATCA
AGACATTGTTCTTCTTACAGATCTGAATGCAACAAGGATGATATCTGTTT
ACATAGAGACTTAATTCGTGCAAAACACGATTACCATGACCTTGAGTATG
GAAGAATCAGAAGTTACACTCGATAGATGCACATGTCAGTAGAAAGCCAA
CCAATGAACAAAAGGCATAGTCCTTTCTTCGTCAAAGACATTTTGGGTTT
GAGCGATGAATCAGAGAATGAAAGTGACCAAGCAATGGATAGTGGCGATG
ACCAGAGCTTCAGAGAAAGCAGTACTGAAGAAAGCTTAGAAAATTTGGAT
GACGCTTCATGCGGCAAAAAGACAAGACAATGTTTCACATCCAAACAAGT
TGAAGAACTAGAAAGGCTTTTCAATGAAACCAACTACCCTGATGCATACA
CCCGACAGATGCTTGCAAAACGAATGAACGTCTCTGAAACCAGAATTCAG
ATCTGGTGCCAAAACAGACGTGCAAAATTACGGCGACAAAGAAAACAACG
AAAACCAATGCTCCATGGATTGAGTAGTCCACATAGTTGTTATTACCCAT
CAAGTGGTGCATGGTTACAACCTCATATCAACTCAATGTTACCTTTCCCT
GTTCTACCTTCGCCACCACACAGATCACCAGTCCATTCACCTCTCTCATT
TGATTCACCATCAAGACATTGTTCTTCTTACAGATCTGAATGCAACAAGG
ATGATATCTGTTTACATAGAGACTTAATTCGTGCAAAACACGATTACCAT
GACCTTGAGTATGGAAGAATCAGAAGTTACACTCGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013191XLOC_013191Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023447-proteinTCONS_00023447-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00023447-exon-sc0000454-1491911889:158834..159664TCONS_00023447-exon-sc0000454-1491911889:158834..159664Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1510915933:158834..159664TCONS_00023447-exon-sc0000454-1510915933:158834..159664Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1575043694:158834..159664TCONS_00023447-exon-sc0000454-1575043694:158834..159664Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1491911889:163768..163922TCONS_00023447-exon-sc0000454-1491911889:163768..163922Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1510915933:163768..163922TCONS_00023447-exon-sc0000454-1510915933:163768..163922Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1575043694:163768..163922TCONS_00023447-exon-sc0000454-1575043694:163768..163922Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1491911889:164146..165090TCONS_00023447-exon-sc0000454-1491911889:164146..165090Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1510915933:164146..165090TCONS_00023447-exon-sc0000454-1510915933:164146..165090Clytia hemisphaericaexon
TCONS_00023447-exon-sc0000454-1575043694:164146..165090TCONS_00023447-exon-sc0000454-1575043694:164146..165090Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000454supercontigsc0000454:158834..165090 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.206026 0.0803633 0.0699821 0.182577 0.138919 0.197596 1.77469 2.28139 6.05914 13.0965 0.981042 7.34086 14.2503 23.6927 23.8423 29.5411 5.22762 4.66063 0.262813 0.32085 0.557754 0.320634 0.590564 0.429527 0.287562 0.157934 0.226002 0.120598 0.137204 0.139789
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR017970Homeobox_CS
IPR009057Homeobox-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00023447 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top