TCONS_00027899 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027899
Unique NameTCONS_00027899
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1258

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027899 ID=TCONS_00027899|Name=TCONS_00027899|organism=Clytia hemisphaerica|type=transcript|length=1258bp
ATTCTATGATTATTTATCCCTTGGAGTTAACTCAGATACATTCACAACTT
CAACAAAACATAAATATGAGGGAATACAAGCTTGTCGTTTTAGGATCTGG
TGGTGTCGGTAAATCTGCCCTGACTGTACAATTCGTCCAAGGTAtctttg
ttgaaaaatatgacCCCACCATCGAAGATTCATATAGAAAACAAGTTGAA
GTTGACGGTCAACAAGCAATGTTAGAAATTTTAGACACAGCTGGTACAGA
ACAATTCACAGCTATGAGAGATTTATATATGAAAAATGGACAAGGTTTTG
TCTTAGTATACTCAATCACAGCACAAAGTACGTTTAACGACCTCATGGAC
CTGAGGGATCAAATTCTACGCGTAAAAGATACCGAAGATGTACCCATGGT
ATTAGTCGGTAACAAATGCGATCTCGAAGATGAACGAGTAGTCGGTAAAG
ATAACGGACAAAATCTCGCCAAACAATTCGGAAACTGTACTTTCCTTGAA
ACGTCAGCCAAGATGAAAATCAACGTCAACGAAATCTTCCACGATCTTGT
CCGACAAATAAACCAACGCCAACCAGTCACACGCCCAGGAAAAAAAGCGT
CCGGAGGGAAAAGTAAATGTGTTTTGCTGTAAAGTGAAACTCTTTTGTGA
TCTTTTTCGATGctcatattttcatttttggttgTTACTAACACTCTCAC
CTAAACGTTAACAAAAGTTAGCACCTTCATCATCCAATCAAAAAAAGTAT
GTCGTGCGCCAAATAGATGATATTGGTTGAAAAGACCTTCAAATATGAGA
AAAAGGTATTATTAAAAAGATGATACATAGCTTTGTGGGTGGAAATGGTT
TATTTTGATACCGTACAGTACCTAAGCTGCACGTCCTTGGTAGCCAGAAA
AGTTATACTCACTAATAGATAATGACGCTATaatgataatgatgatgata
ttGGTATAATAAATTttacgtttttatttttttattttccacttAGTATG
TATAAATACATGAATGTTTTCTTGCCTAGTTTTATTTTTAGGTCAAAGTC
TAATTGAAATTAACGAGAGCTCTACAATCCGATCtatatattatatttgt
ttTCATAAAGAATTCTTGATTCATCCGCACAATTGGTATCGTTTTTGTGA
AAGCTTTTCTTAACGTACTTTTAACGTTTAATTTTTCTCGCTTCTTTGAA
ATTGTACTTTTGTCGCTAGAtttatgtcaaaaatatttattttcccaatt
tattaaTC
Run BLAST on NCBI

protein sequence of TCONS_00027899-protein

>TCONS_00027899-protein ID=TCONS_00027899-protein|Name=TCONS_00027899-protein|organism=Clytia hemisphaerica|type=polypeptide|length=209bp
SMIIYPLELTQIHSQLQQNINMREYKLVVLGSGGVGKSALTVQFVQGIFV
EKYDPTIEDSYRKQVEVDGQQAMLEILDTAGTEQFTAMRDLYMKNGQGFV
LVYSITAQSTFNDLMDLRDQILRVKDTEDVPMVLVGNKCDLEDERVVGKD
NGQNLAKQFGNCTFLETSAKMKINVNEIFHDLVRQINQRQPVTRPGKKAS
GGKSKCVLL
Run BLAST on NCBI

transcript from alignment at sc0000653:156074..170679-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027899 ID=TCONS_00027899|Name=TCONS_00027899|organism=Clytia hemisphaerica|type=transcript|length=14606bp|location=Sequence derived from alignment at sc0000653:156074..170679- (Clytia hemisphaerica)
ATTCTATGATTATTTATCCCTTGGAGGTACTAGATTGAACTTTTCCGCAT
TTAAACTTATTTTGTTTGGGGTTTGTTTGTCCCGTGATCCGGAATTTTCC
AAAAACTAAAGGAGGGGCCGTCATCCCGGCCACCAGTTCTACATATAGAA
TTCCTACGACCGCGCATTATAAATTTTGAAATAAACAAGGCGGCTCCGTG
GTGATTGGGCAAGCAAGAAGTGCCTGAAAGAAATTTGTGATATTTTTGCT
GAATTAATCATCGTTATTTTGAAAATGTGAATGGTGTCTGTGTGAATTAT
TTGACCTTGGATATTTAGTTTTATGTATTTTTATTTTTTTGACTTTTTCT
AGTTAACTCAGATACATTCACAACTTCAACAAAACATAAATATGAGGGAA
TACAAGCTTGTCGTTTTAGGATCTGGTGGTGTCGGTAAATCTGCCCTGGT
AAGGACAGTTGTTGTCTATACAATATATATGTACAATGTCCTCCCAATTG
TTATATTTCTGATTTGCATTTTAACGCAAGAATCTTGTGTCTTTTTGACG
ATTTGTTTTAAAACAACAAAATCATCATTTTGTCTGTTTTATTTTGTTGA
CTTGATTTCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGAACCA
ATCGAACATAGTCAACAATCAATCGAACCAATCTAACCTTACTCGAACGC
AATCGAACACAATCGAATATTACCCAGGAATCGACCGTTCGCTTGAGATT
CGATTACGTTCGACAATCGAATCGCAATTATTCAATCGCATTCGATTACG
TTTGATTGGTTCGATTGCAATTTTTGTTCGAAGTTGTTCGATTGACACTG
TCTGGTTATAGTGATCATTTTAAAATATATATTCTTCCCGCAACTAAACT
TTTGTTTGAAATAAAATTTTGACAACCTCTAAAATTCAGTATAAAATATA
AAAAACCATAAAATAAAAACCTTCTTTCTTGGATGTAACTGTATTTTGAT
AATAATTGAATTAGAGGGTCTTGCTATGTATATACCGGGAATTAAGCTAT
GATGATGAGTTACTTTTCACATTCTTAAGTGAAACTGAGAAAAAAACTAT
GTGCACCAAAAAGTTTCACCATTATAGTGGCTTTTGCACCATGTACACTT
TCCTAGACAACGATCTCAAATATCTTAATTTTGCGTCCTCGTTTGGTCTA
AAAAGTGAGTACCGTAGAGTCGTTTAATCTCGACATACGTCTTGCAATCT
CGACACCGGATCTGTAAAATAATCAAAACAAACCTTGAATGAAATTCTTG
GTATCATTCTTATCGAACAAGTTCATCCATCAAACTAGAAGTTCAGTAAA
CATTGCAATCCTTTCAATTAAAAAGAAAGCCAAATTACAAGCAGTTTTAC
ACAACACACGAAACGCATGCAAACTTCCTCGTCACTTTCTCGTGTCCATC
ATTAAAATTTTACAACTTTATTACGCTTCAAGTCACGTGATAAAAATAAT
TCGCGCGCTTAGCCTGGTTTCCTCTTCCTTATATANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCATTAAATTCAAAAGGAAACCGGGTTCTTTTTATTA
TTTTCGGTTCACGGTAAAAATGTCTACTAAAAAATTCCTCGCGTGCAAAA
TGTTGTGTTGTTTTGATTTAGACATCTTCGTTCAGTTCGTTGAAAGCATG
CTAATTAGTTTTTAGCGATTACTACATCGTTAAAGTTTTCTTTTCAAATA
TAAGTATAAGTAATAACACTTCACATTTCTCATATTATATTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTGGTATGTATTTGTTTATGTTTGATTTTT
TATTTCGAAGACCAGCCTACAGCTATGTCGAGATTGCAAGACGTATGTCG
AGATTAAACGACTCTACGGTAGGTTGGTCAAAAAAATTTTCAGATTTTCT
TAAACTTGGTTTGTGGTCCCTTCAACCGCCTGAAGGGCGTTAACTGAGGC
GAAGAATGAAAATGTTCGATAGCAAGCCAGCGAAAATGACGCGTGTTTTG
CGTGGTCTCATTCATGACCTTTGAACACTGACCTTTGACACAAAATGGCG
CATGTAATGATAAACAAATGCACTAGAAATCGCTCTCAAAAAATCAACAA
TAATAAAATTTTTGAGCAAAGGTAACGTTGACTCAAAAAATCTGACGAAT
TTACTGACTCCTCGACTCAATTTTCAAAAGTCAGTTGGGCGATGCGAAAC
GAAGATTTTTCATTTGTCATTGCCATCCTATGAAAAAGCATAATAAACAC
TATACCATAAGGCAATTACTTTTTTATTTTCTGGTTTACGGACATTTGGA
GATGATCTTTTGGACCGGAGGATGGAAAAAAAATAAAAATAAAATTGCTC
TTTTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAC
CCTTTTACTTGCCCTTCTTGCTTTTATAAAATGTAATTTTCTATAAAGTT
TCCTTTTTATGGCTGTTCAGTACAAGGTCGGAAGAGCATAAATAAATAAA
ATACTGTAAAATCCAATTTTATTTTTATTTTATTTTTGCAAAAAAAACGT
CGGCGATTCCGTAAACCAGAAAATAAAAAAGTAATTGCCTAAGTTGGACT
GATATTGACATCCCTTGTATAATTCGGACACCTTTCTTAGAGATAGGATT
AAAGGGAAGGCCGGAAAAAATTGTGTTTTCTGAGAGGTAAAAGTTTTTTT
TGAAAAATTTTGGCCGATAAAAACAAGGAGAGAGGGGTCTGAAGCTTATT
TATAAAATAAAAAATTTGAATGTTTTTTGTCAAGGACCTCTTAACATACT
AAGATATTAGACTCGTTATTACCGTCAACTGCTCTAACTTGGGACGATTG
GTCAAAACAAGGTATTTCTGGTCTGTATTTTCACTTACTGTTAAGTCTCT
TTGACAACAAATTTGTTTTCGTTTATTTTTTAATACGCCGTTCATTAAAT
CAAATCAAATGACTTTGGAGGTTCGGTGAAATGGTGGCCGAAATTGCCGA
CCCATGTTTTGTCAGATAGTCCCAAATTGGAGCAGTTGACGGTAGGTCGT
AGTATACTAAGAGGTTGTAGTATGCTAAGAAATTGATGTCTTAGAATCCT
AAAAGTGCGATGATTTTCTCAGCGATTGTGTATAGGTTCTTTTCGCAAAT
ATTTTTACTGCAGTTTATGATATTTGGGATAGAAATAATTCAACCAACAT
GTTGAACACACAGCGGTTTAAAGAAGGGTGTCAGAATTCAATGAGGGATG
TCGACATTAGGCCAATTTACGGGAGTAAGTTGGACTAATGTTTACATAAG
TTGGTCTAATTCGATTCAGTCACTCTTTTTTAGAAGTAGGAATAAAAGGA
ATATCTGAATTAACGATTGAAAAAAAGTGGATTGTCAAAGAAATATAGTT
TTGATCAGTGATTCTGATCTTCATAATTCATATCTCTAAAGGCAGATTTT
AGAATTAGATGAGGGATGTCAACATTAGACCAACTTTTATTTAGTAACAA
TAAGAGAATGTCATATGCTCCAAAAATTGTGGAACCATGGCTAATTGAGC
ATTTGACTTAATGCAAAAATATTTTTGTTATACTATCTGTCACTGAAAGT
TATGATGTCTGAGATTTTGATACCAATCTGGAAGTGTAGGTTTCTGAAAA
TATTTGTTGGTATTTGGAATTTTCATCATAAAATGGATTATTAACTAAAA
CTCTTTTCTGAGATTTCCTAATTTTGATATGTATTATAATACATTTACAA
GATGGACTCTAGTTAAAGCTAGTGCCATCTAATGCATATTTTACTATTAT
TTATTTCATTTAAAAATGTGACTAACTGTAACAATCTAATTAACGAGGGA
AGATAAACCAGAGAAAAAAAAAAACAGTTTTCACTCAAAATAAGATTTTG
ATTCAAATACATACATGACATGACCAAATTTTACTTTTAATGCGGCATAT
TATACTAGAGTTTTTATAGGAATAAATTTATGTGAAAATAAGAATTATCC
TTCAACTGACAGTATATTCAGTCTGTTTATAATTCTTAATGGGTTGAACA
GTTTTTGAAAACAAAAAGCTGAACATGTTAAAAAAATATTCTTTAGAGAA
ATGTGTGTGTGTAAAGCTAAAAACAGGATAATGCTTTTATATTCGTTGTG
TTAATGTCAAAAAAATGAAGTAGAACATTAAATCAGAAAAATTCAATGAC
GTTATTGTCATGGACACTTTTTATTATCATAATAATAACACTGAATAAGA
TCGATTATTTCAACTTGAAAAGAGATAGAAAAAGCCTTTTTAAGGATATG
ATTTAATTACAAGAATTACGATATTGATTTAAAGAAGGCAACGACAGGAA
GTGATAGCATGTACTTTGTTTTTGTTGTGCAGCAGTTATACTACTTCCTT
ATAAATTCCAAAACTGTGACTTGTATTGCAAAGCATTAGATTTAAAATTA
CCTTTCTGTTTATTTTTACAATGGATTTCCTTTCTAAATCGTAGTGTGAT
GCCCTATGATGTCACGTTATATGTATAAAACAAGATTTTGTAAAAATATA
AGTTTCCTTTCTAAATCCACAACAATTAAAAGATCTCACGATGTAACTTT
TTGAGCCTTATTGCCTACATTAAAAATGCATGATGATAAGAAAACCAAAA
TAATATTAATATTAATTAAGTATAATTCAAATCAAATTTTTCTAAATACT
AATGACCTAAAGGCCAACTTCGTCAATCATCATCATTTGAATTGTACCAT
GTACATACCTCTATAAACACCCAATATCACCATAAATCTAAAATGAATAA
TGCTTCTTGTCACATCATTAAAAGATTCATAGATTAAATTTTAGGTTTTT
AACTTTAAAAAGTTGTTCTCCAAGGTGTTTCAGCTTTTTTAAGGTTCCTT
GCCTAATAAATCTCAGAAGAATGTCACCAATTGGTATTCTCAATGTTAAA
TGTTTTTTCATTCCTAGACTGTACAATTCGTCCAAGGTATCTTTGTTGAA
AAATATGACCCCACCATCGAAGATTCATATAGAAAAGTAAGTGATTTTCA
AAGAATTATAACTGTAGATCAGCAGATGTCAATGTAGTCGAAATTTGTTG
ATAATATAGTTGATATTTGATATTTTGTTTAAAGATTTATACAGTATGAC
TGTCCAGACTCAACGAAGATGTTTACAGTTCAATGCCCTTTCGTTGTATT
ATTCTGAAATCAACAAAATGTCCTGTTATATTTTCTAAAACCTTGTTGAA
GTTGGTTTTAGATTTATTTTGTGTATATATCTTTCTGAATTTTTCTTAGT
CTGAGCACCATATTAGATGTTTCAGTTTTATTGGTTCATTTTAAGAAATT
GAGTTAATGTGAAAAATATGATATATTGTAATTCTTTCTTTTAGCAAGTT
GAAGTTGACGGTCAACAAGCAATGTTAGAAATTTTAGACACAGCTGGTAC
AGTAAGTCATGATTTTTCTTTTATCTCAATTTTGTTTGGACAAATAAAAA
TACCTAGATTTATATATATTAAAAATGGACAAGGTTTTGTCTTAGTATAC
TCAACCACAGCACAAAGCACAATTTTTTGTTTGAAAGAATCTAGGTATTT
CAAACAATTTTCTCTTAATCTTTATGTTCTATCAATTCCATGTTTCAAGC
TTCAGTTTTATCGGTGAAAATACAAAGGCTTTTTTTACCACACTTATCTA
TTCCTTTGAATAATTTTATCTTCCAGGAACAATTCACAGCTATGAGAGAT
TTATATATGAAAAATGGACAAGGTTTTGTCTTAGTATACTCAATCACAGC
ACAAAGTACGTTTAACGACCTCATGGACCTGAGGGATCAAATTCTACGCG
TAAAAGATACCGAAGATGTAAGTTTTATTTATGTTTTTGTTATCACAGTT
TCGTCCAAATTCTTACCTTTNAGATGTAAGTTTTATTTATGTTTTTATTT
TATTTTTATTATTATTATCACAGTTTTGTCCAAATTCTTACCTCCAGTGG
ATTGTCACAAATATCGTGAATTTTGGCCCTTTTCAAGGATCAACAGGATA
TCGATAATATCTAATATTGAGATTAGTTGTTTTGAAAAGGTACAAACTAT
TGAAAAGTTGTATTGAGGAGGAACTACTTTTATTTCCAAAAATGGTGACA
TTTCTTAATTCATTTCACTTTATTGGAATGATTGTATGTGCAAGAAAACA
TCTAAACATGGTCTTATTTTCCAAAAAAAATTGTTTCCAAAAAAGATTGT
TATTGTAATTTTATGGGTTGTAATAAAGGGTTTTCATCAAATTTTCAAAC
AATATAAAATATTTCATTTGAAAAAATGTTTACAATTTAAAAGAATTATT
AGGTTGTTTTTGTTTTTCAAAACAGCAAAACTTTCTGACAACGCTAGCAA
CAGAACCTTTTAATTTGGACACAGTCATCATACAAGTTATTATATAACCT
CAACTAAAACTTAACTCGTCAATTATCTGTTTCGATAAGTGAAAAATTCT
TGAGGCTGTTATCACCAGGTTATTATCTTTTAATTGACACAATAAACGAT
CGTTAATTGATGATATAATCTTAAGGTGTGTTTGCTGCCTCTGTTTTCAA
AGATATTTTCTGTCCTAAATTATTATGTACTTTATTTATGAAATAACGTT
TGATTACAAAAAGTTCATATCTAATCATCAGATGATGAAATAAAATAAAG
AAAATTTGTAAATTTTAATGTTCATGAAAGGTTAAAAAATTCTTCTTTTT
TATGCCAAATGTAACAAACTTTAAATACAATAACAATAAGCTCATATTTA
TGAGAACCAATGAGCTAAGGCAAAGGAGACAGGCTTACATTGCTTGTTTA
AAAGGGACCGAGCTAAACAACATCAATTTATACTGACAATCAATTACATA
TTTTAAACATTTTTAAATGTATAAAAAACTACTTACAAAACCTTTGCATT
CTATTTTTAAGCCAATCAGTAGAAATTTTTGAAAACCATCAGTGAAAATT
TCAAGTAATTTTTTGTGACCGTTATACGGCCAAAATACTCAATTTTGAAT
TCAGTTTTAAAACTCAATATTTAAAAAAATTTACCATGTGTCAGCAAAAT
ACCAAGAATGTAAGAAGGTGGGTAGAATCAAAATTCTCTTCGCTTTATGA
TAAGCAATCCTTTAGATTAAACTTTTCATAGGGCATCCAAGGGGTCTTTA
GACAAATTTCAAGCCCTGTCATGGGTATTGATTGCTGTAAGTGGTTACCA
AGCTGGTGAAAACTCAAATTCTAATCAGAAAAAACGGCCAGTGGTAGAAG
TGCTTGGAATTTTGTCTGATATTTATGAGTCTTTATTAACCCTGGCAATA
GTGATTTTTAAGTATCCTTGGTATAAAAACATGGAAAATTTAAAAAAAGT
CAATAATTAATAGTAATTATTATTTCTCTTTCATGATTCTCAGGTACCCA
TGGTATTAGTCGGTAACAAATGCGATCTCGAAGATGAACGAGTAGTCGGT
AAAGATAACGGACAAAATCTCGCCAAACAATTCGGAAACTGGTATGTTAA
GTTTATATTTTTTCCTTGGACTTTGTTCATGGATTCTGGTTCTGTATCTC
TCTGGACTGTAATGGAGCTATTCTATTGGTCAGAAATGAAGCCAGTCGCA
AATTTGACCAATGAAATTGCTGCTTTTCCTTTCAGAACGATACCGAACTG
GGAGGTCTGAGTATGACCAAACAAATACTTCATGGGATCATCCCCCCCCA
GGAAGATGGGGGGGAATCAGATTTTGGTGCCAGGGGGGAAGTGAAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGGGGAGCACGAATTTTAAAGACAGGTGGGGGGGAAAGGCCAGAT
GGGGGATTTTAGCTCATATTAGGGGGGACCAAAAAGCTGGAGGACGCCAT
GTACTTTCCAAAAACCCTTTACCAAATGCTACTGTCATGTATAAATCACA
TTTTTCTCGAGATGGATACATTTGAACTGGTTTGGCCTCGCTCTGATTGT
TTTAACCATTTGACCTATTTATACGTAAGATTAAAAAAAAAACAGATCAC
GAAGCCTCATAATGTTTCTTGAATGTATTCTATCTCGAGAAAAGAACATT
CTTTAGTGATTGAATCTAAAATCAGCTTTAGAAGCTCTACCATCATGATT
TATGCAAATCCTTACCAAACACACTAACAACGCTAACAAACTTTCATTCA
CAAAGCGAGTTGACGGCGCCTTTAAAAACAGGTTTTGGTGACTTTTTTGG
TGACTTTTTACGACAACCATCATATTGCTTGACATCAGCATTCGATCCAA
TCAACACACAGACTAACCATGCACTTTCACCCGACTCAAGGACAATATAA
TGGACTGTTGACATTTTTCCATATACATTGGACCATCAATTTTTCATTGT
CATTTTTGATACCTTCTAATGAGGTTGGTATTGTACATTACTCTTTATAA
TAATTCATATACACCCAAAAAAATAAATTCGTCAGCCAATACACTATATT
TGAAACTCTTTGTATTTGGGCTCTTTAGAGTTCTGTGTTAGGCTGATTTT
CAACTTTCCCAAAGGTCAAATTAGAACTTCATTCATTAGAGCCAATTAGA
ACAACTTGGCAACTAATGATAATTAATTTGCAGCTTCTGCAATTTTAAAT
CAATTAAACAACTTTTCAATGGAATTTTTCCACTTTTGTAATATCAACAA
ATGTATCAATTTTGTGGTTTCGTATAAAATTTATCTGAACTACCTTTTTA
GCTACTATTGAAAAACTGAAGCATTGGTTTCGAATTTGAGATACTATTTC
TCACTTTTATATTCAGTGCCATAAAACAACACCATGACACCATCTGCCTA
CAATACAACACTGCACTACTACATCCATAATATATCCTAACTACTTTACT
ATAATACTCTATAACACCATGCATCCATTCACTCCAACAGATTATAACTG
TTTTTGCACGGGTTCATTCAGTAATTCAGGAATCATTTTCTGACCATTTC
TTTCATTTTGTAGGTAGGTTTTCCAACATTCTAGCTTTAAGATAAATATT
ATTTTTAAATTTCTTCTTAGTACCTTCATGGAAACATCAGCCAAAATGAA
GATTAACGTTAGTGAAATGTTTTTCGATTTGGTTCGACAGATTAATCAAA
CGAGTCCAGTGGAGAGGACACGAACACGATCTAAAGGAAAGAAATGCGTC
ATTTTGTAAACAAACTGTTTGGAGAGATTCAATATCGAAACCATGACTGT
TTTTGGTCTCTTTCAGCATAGATGCTTTAACATGAACTATGGTGCTGGGT
TAATCTTTGAATGCATTTCTATTCGAGTGCCCATAGACCTTGTAACCGTC
CTGATGTTTTAGGTTGCAATGGTGAATAGGCTAGTCTGGTCTATTCATTG
TCTGGCCAGTTTATGGGTTTACTTTTGTTATGATTCATTGACGATTTCTG
GAAATTTTGTTACCCCGAATTACTTTAATCAAAGGAATGCCTTTTTTTGG
AAAATATTTATTGAAAAAATTGTGTATAATATTATCTTTCTTTATTCTAA
CAAAAAACTATTCACTTTAGATTTCTTCGCTATTATTATTAAAGCAGTAT
TAAGGTCTGATTCTGTCTGATTAAAATAACTTTAATTAAAAGTGTTTTTT
TTTATCTTACTTCATATTTCGAATCAGGTTTTTAATTCTTGACTTATTCC
TTATCAGTTTTTTTTTCAGTAGAATCTTTGGTTCGTCACTTCTTTTACAT
TAGATAGATCATTTGTAGGTAGTTGCAATTTTATTTTAACAGATATTTTT
ATTCATCCAAAAAAATCATTAACCAAAAACCATAAATCCAACAATTGAAC
CGTCTAAAAATTATGTCTTAAAATTTAGGAGACGTCCCATTTAGTCCAAT
AATTAATGTAAACGGACTATGGTACTACAGAAGAGAATCTTTGATGTCTC
CTTAACTTAGAAAAGCTTAAATTTATAGTGTGTTTTCAGGAATTTTACTG
TTTGCAGAAAAATCGGTCAAAACGAAATATTCTTCATTAAAGAAAATTTC
AAATAATCTTTTCAAAAATATCGTACAGTATTCATGATATGCACCGTTGC
AATGTCTTCTAACATTACATAACGGGNTCTTTCAGCATAGATGCTTTAAC
ATGAACTATGGTGCTGGGTTAATCTTTGAATGCATTTCTATTCGAGTGCC
CATAGACCTTGTAACCGTCCTGATGTTTTAGGTTGCAATGGTGAATAGGC
TAGTCTGGTCTATTCATTGTCTGGCCAGTTTATGGGTTTACTTTTGTTAT
GATTCATTGACGATTTCTGGAAATTTTGTTACCCCGAATTACTTTAATCA
AAGGAATGCCTTTTTTTGGAAAATATTTATTGAAAAAATTGTGTATAATA
TTATCTTTCTTTATTCTAACAAAAAACTATTCACTTTAGATTTCTTCGCT
ATTATTATTAAAGCAGTATTAAGGTCTGATTCTGTCTGATTAAAATAACT
TTAATTAAAAGTGTTTTTTTTTATCTTACTTCATATTTCGAATCAGGTTT
TTAATTCTTGACTTATTCCTTATCAGTTTTTTTTTCAGTAGAATCTTTGG
TTCGTCACTTCTTTTACATTAGATAGATCATTTGTAGGTAGTTGCAATTT
TATTTTAACAGATATTTTTATTCATCCAAAAAAATCATTAACCAAAAACC
ATAAATCCAACAATTGAACCGTCTAAAAATTATGTCTTAAAATTTAGGAG
ACGTCCCATTTAGTCCAATAATTAATGTAAACGGACTATGGTACTACAGA
AGAGAATCTTTGATGTCTCCTTAACTTAGAAAAGCTTAAATTTATAGTGT
GTTTTCAGGAATTTTACTGTTTGCAGAAAAATCGGTCAAAACGAAATATT
CTTCATTAAAGAAAATTTCAAATAATCTTTTCAAAAATATCGTACAGTAT
TCATGATATGCACCGTTGCAATGTCTTCTAACATTACATAACGGGCCCAA
CAGCGGATTGGTTGTAAGTAATGTATTGACTGTTTTTACATTATTTACAA
CCAATCATCTGTTGGGTCCGTGATGTAATGTCAGATGTCAGAAGACATTA
CAATGGTGCATATCATGAATAAACAGAGCTCAAAAAAATTGACAAATTAA
AACCTTTTTTTTTTGACATATTATAGAGTGTCGCAACGTTTTCGTCTGTA
TTACACGGTCTTCTCGAGGTGGATACGGGATATACAGGGTCAAACCGTAT
TGGTGGCGAGGCTTGCCTTCTTTTTTTTCTCAATCGAACGCTAGGAAGAC
AGGATACGGTATATATCTCACCTCCACGTGATGTCTTTTGACCAATGAAA
TCGCTAGAATCTTACTGATGNTAATATTATCTTTCTTTATTCTAACAAAA
AACTATTCACTTTAGATTTCTTCGCTATTATTATTAAAGCAGTATTAAGG
TCTGATTCTGTCTGATTAAAATAACTTTAATTAAAAGTGTTTTTTTTTAT
CTTACTTCATATTTCGAATCAGGTTTTTAATTCTTGACTTATTCCTTATC
AGTTTTTTTTTCAGTAGAATCTTTGGTTCGTCACTTCTTTTACATTAGAT
AGATCATTTGTAGGTAGTTGCAATTTTATTTTAACAGATATTTTTATTCA
TCCAAAAAAATCATTAACCAAAAACCATAAATCCAACAATTGAACCGTCT
AAAAATTATGTCTTAAAATTTAGGAGACGTCCCATTTAGTCCAATAATTA
ATGTAAACGGACTATGGTACTACAGAAGAGAATCTTTGATGTCTCCTTAA
CTTAGAAAAGCTTAAATTTATAGTGTGTTTTCAGGAATTTTACTGTTTGC
AGAAAAATCGGTCAAAACGAAATATTCTTCATTAAAGAAAATTTCAAATA
ATCTTTTCAAAAATATCGTACAGTATTCATGATATGCACCGTTGCAATGT
CTTCTAACATTACATAACGGGCCCAACAGCGGATTGGTTGTAAGTAATGT
ATTGACTGTTTTTACATTATTTACAACCAATCATCTGTTGGGTCCGTGAT
GTAATGTCAGATGTCAGAAGACATTACAATGGTGCATATCATGAATAAAC
AGAGCTCAAAAAAAATGACGAATTAAAACCTTTTTTTTTGGACATATTAT
AGAGTGTCGCAACGTTTTCGTCTGTATTACACGGTCTTCTCGAGGTGGGA
TACGGGATATACAGGGTCAAACCGTATTGGTGGCGAGGCTTGCCTTCTTT
TTTTCTCAATCGAACGCGAGGAAGACAGGATACGGTATATATCTCACCTC
CACGTGATGTCTTTCGACCAATGAAATCGCTAGAATCTTACTGATATGGG
ATAATTAACCAAATATGTGTTTTCCTCTTTTTCAGTACTTTCCTTGAAAC
GTCAGCCAAGATGAAAATCAACGTCAACGAAATCTTCCACGATCTTGTCC
GACAAATAAACCAACGCCAACCAGTCACACGCCCAGGAAAAAAAGCGTCC
GGAGGGAAAAGTAAATGTGTTTTGCTGTAAAGTGAAACTCTTTTGTGATC
TTTTTCGATGCTCATATTTTCATTTTTGGTTGTTACTAACACTCTCACCT
AAACGTTAACAAAAGTTAGCACCTTCATCATCCAATCAAAAAAAGTATGT
CGTGCGCCAAATAGATGATATTGGTTGAAAAGACCTTCAAATATGAGAAA
AAGGTATTATTAAAAAGATGATACATAGCTTTGTGGGTGGAAATGGTTTA
TTTTGATACCGTACAGTACCTAAGCTGCACGTCCTTGGTAGCCAGAAAAG
TTATACTCACTAATAGATAATGACGCTATAATGATAATGATGATGATATT
GGTATAATAAATTTTACGTTTTTATTTTTTTATTTTCCACTTAGTATGTA
TAAATACATGAATGTTTTCTTGCCTAGTTTTATTTTTAGGTCAAAGTCTA
ATTGAAATTAACGAGAGCTCTACAATCCGATCTATATATTATATTTGTTT
TCATAAAGAATTCTTGATTCATCCGCACAATTGGTATCGTTTTTGTGAAA
GCTTTTCTTAACGTACTTTTAACGTTTAATTTTTCTCGCTTCTTTGAAAT
TGTACTTTTGTCGCTAGATTTATGTCAAAAATATTTATTTTCCCAATTTA
TTAATC

Coding sequence (CDS) from alignment at sc0000653:156074..170679-

>TCONS_00027899 ID=TCONS_00027899|Name=TCONS_00027899|organism=Clytia hemisphaerica|type=CDS|length=4410bp|location=Sequence derived from alignment at sc0000653:156074..170679- (Clytia hemisphaerica)
TACTTTCCTTGAAACGTCAGCCAAGATGAAAATCAACGTCAACGAAATCT
TCCACGATCTTGTCCGACAAATAAACCAACGCCAACCAGTCACACGCCCA
GGAAAAAAAGCGTCCGGAGGGAAAAGTAAATGTGTTTTGCTGTAAGTACC
CATGGTATTAGTCGGTAACAAATGCGATCTCGAAGATGAACGAGTAGTCG
GTAAAGATAACGGACAAAATCTCGCCAAACAATTCGGAAACTGGAACAAT
TCACAGCTATGAGAGATTTATATATGAAAAATGGACAAGGTTTTGTCTTA
GTATACTCAATCACAGCACAAAGTACGTTTAACGACCTCATGGACCTGAG
GGATCAAATTCTACGCGTAAAAGATACCGAAGATCAAGTTGAAGTTGACG
GTCAACAAGCAATGTTAGAAATTTTAGACACAGCTGGTACAACTGTACAA
TTCGTCCAAGGTATCTTTGTTGAAAAATATGACCCCACCATCGAAGATTC
ATATAGAAAATTAACTCAGATACATTCACAACTTCAACAAAACATAAATA
TGAGGGAATACAAGCTTGTCGTTTTAGGATCTGGTGGTGTCGGTAAATCT
GCCCTGTCTATGATTATTTATCCCTTGGAGTACTTTCCTTGAAACGTCAG
CCAAGATGAAAATCAACGTCAACGAAATCTTCCACGATCTTGTCCGACAA
ATAAACCAACGCCAACCAGTCACACGCCCAGGAAAAAAAGCGTCCGGAGG
GAAAAGTAAATGTGTTTTGCTGTAAGTACCCATGGTATTAGTCGGTAACA
AATGCGATCTCGAAGATGAACGAGTAGTCGGTAAAGATAACGGACAAAAT
CTCGCCAAACAATTCGGAAACTGGAACAATTCACAGCTATGAGAGATTTA
TATATGAAAAATGGACAAGGTTTTGTCTTAGTATACTCAATCACAGCACA
AAGTACGTTTAACGACCTCATGGACCTGAGGGATCAAATTCTACGCGTAA
AAGATACCGAAGATCAAGTTGAAGTTGACGGTCAACAAGCAATGTTAGAA
ATTTTAGACACAGCTGGTACAACTGTACAATTCGTCCAAGGTATCTTTGT
TGAAAAATATGACCCCACCATCGAAGATTCATATAGAAAATTAACTCAGA
TACATTCACAACTTCAACAAAACATAAATATGAGGGAATACAAGCTTGTC
GTTTTAGGATCTGGTGGTGTCGGTAAATCTGCCCTGTCTATGATTATTTA
TCCCTTGGAGTACTTTCCTTGAAACGTCAGCCAAGATGAAAATCAACGTC
AACGAAATCTTCCACGATCTTGTCCGACAAATAAACCAACGCCAACCAGT
CACACGCCCAGGAAAAAAAGCGTCCGGAGGGAAAAGTAAATGTGTTTTGC
TGTAAGTACCCATGGTATTAGTCGGTAACAAATGCGATCTCGAAGATGAA
CGAGTAGTCGGTAAAGATAACGGACAAAATCTCGCCAAACAATTCGGAAA
CTGGAACAATTCACAGCTATGAGAGATTTATATATGAAAAATGGACAAGG
TTTTGTCTTAGTATACTCAATCACAGCACAAAGTACGTTTAACGACCTCA
TGGACCTGAGGGATCAAATTCTACGCGTAAAAGATACCGAAGATCAAGTT
GAAGTTGACGGTCAACAAGCAATGTTAGAAATTTTAGACACAGCTGGTAC
AACTGTACAATTCGTCCAAGGTATCTTTGTTGAAAAATATGACCCCACCA
TCGAAGATTCATATAGAAAATTAACTCAGATACATTCACAACTTCAACAA
AACATAAATATGAGGGAATACAAGCTTGTCGTTTTAGGATCTGGTGGTGT
CGGTAAATCTGCCCTGTCTATGATTATTTATCCCTTGGAGTACTTTCCTT
GAAACGTCAGCCAAGATGAAAATCAACGTCAACGAAATCTTCCACGATCT
TGTCCGACAAATAAACCAACGCCAACCAGTCACACGCCCAGGAAAAAAAG
CGTCCGGAGGGAAAAGTAAATGTGTTTTGCTGTAAGTACCCATGGTATTA
GTCGGTAACAAATGCGATCTCGAAGATGAACGAGTAGTCGGTAAAGATAA
CGGACAAAATCTCGCCAAACAATTCGGAAACTGGAACAATTCACAGCTAT
GAGAGATTTATATATGAAAAATGGACAAGGTTTTGTCTTAGTATACTCAA
TCACAGCACAAAGTACGTTTAACGACCTCATGGACCTGAGGGATCAAATT
CTACGCGTAAAAGATACCGAAGATCAAGTTGAAGTTGACGGTCAACAAGC
AATGTTAGAAATTTTAGACACAGCTGGTACAACTGTACAATTCGTCCAAG
GTATCTTTGTTGAAAAATATGACCCCACCATCGAAGATTCATATAGAAAA
TTAACTCAGATACATTCACAACTTCAACAAAACATAAATATGAGGGAATA
CAAGCTTGTCGTTTTAGGATCTGGTGGTGTCGGTAAATCTGCCCTGTCTA
TGATTATTTATCCCTTGGAGTACTTTCCTTGAAACGTCAGCCAAGATGAA
AATCAACGTCAACGAAATCTTCCACGATCTTGTCCGACAAATAAACCAAC
GCCAACCAGTCACACGCCCAGGAAAAAAAGCGTCCGGAGGGAAAAGTAAA
TGTGTTTTGCTGTAAGTACCCATGGTATTAGTCGGTAACAAATGCGATCT
CGAAGATGAACGAGTAGTCGGTAAAGATAACGGACAAAATCTCGCCAAAC
AATTCGGAAACTGGAACAATTCACAGCTATGAGAGATTTATATATGAAAA
ATGGACAAGGTTTTGTCTTAGTATACTCAATCACAGCACAAAGTACGTTT
AACGACCTCATGGACCTGAGGGATCAAATTCTACGCGTAAAAGATACCGA
AGATCAAGTTGAAGTTGACGGTCAACAAGCAATGTTAGAAATTTTAGACA
CAGCTGGTACAACTGTACAATTCGTCCAAGGTATCTTTGTTGAAAAATAT
GACCCCACCATCGAAGATTCATATAGAAAATTAACTCAGATACATTCACA
ACTTCAACAAAACATAAATATGAGGGAATACAAGCTTGTCGTTTTAGGAT
CTGGTGGTGTCGGTAAATCTGCCCTGTCTATGATTATTTATCCCTTGGAG
TACTTTCCTTGAAACGTCAGCCAAGATGAAAATCAACGTCAACGAAATCT
TCCACGATCTTGTCCGACAAATAAACCAACGCCAACCAGTCACACGCCCA
GGAAAAAAAGCGTCCGGAGGGAAAAGTAAATGTGTTTTGCTGTAAGTACC
CATGGTATTAGTCGGTAACAAATGCGATCTCGAAGATGAACGAGTAGTCG
GTAAAGATAACGGACAAAATCTCGCCAAACAATTCGGAAACTGGAACAAT
TCACAGCTATGAGAGATTTATATATGAAAAATGGACAAGGTTTTGTCTTA
GTATACTCAATCACAGCACAAAGTACGTTTAACGACCTCATGGACCTGAG
GGATCAAATTCTACGCGTAAAAGATACCGAAGATCAAGTTGAAGTTGACG
GTCAACAAGCAATGTTAGAAATTTTAGACACAGCTGGTACAACTGTACAA
TTCGTCCAAGGTATCTTTGTTGAAAAATATGACCCCACCATCGAAGATTC
ATATAGAAAATTAACTCAGATACATTCACAACTTCAACAAAACATAAATA
TGAGGGAATACAAGCTTGTCGTTTTAGGATCTGGTGGTGTCGGTAAATCT
GCCCTGTCTATGATTATTTATCCCTTGGAGTACTTTCCTTGAAACGTCAG
CCAAGATGAAAATCAACGTCAACGAAATCTTCCACGATCTTGTCCGACAA
ATAAACCAACGCCAACCAGTCACACGCCCAGGAAAAAAAGCGTCCGGAGG
GAAAAGTAAATGTGTTTTGCTGTAAGTACCCATGGTATTAGTCGGTAACA
AATGCGATCTCGAAGATGAACGAGTAGTCGGTAAAGATAACGGACAAAAT
CTCGCCAAACAATTCGGAAACTGGAACAATTCACAGCTATGAGAGATTTA
TATATGAAAAATGGACAAGGTTTTGTCTTAGTATACTCAATCACAGCACA
AAGTACGTTTAACGACCTCATGGACCTGAGGGATCAAATTCTACGCGTAA
AAGATACCGAAGATCAAGTTGAAGTTGACGGTCAACAAGCAATGTTAGAA
ATTTTAGACACAGCTGGTACAACTGTACAATTCGTCCAAGGTATCTTTGT
TGAAAAATATGACCCCACCATCGAAGATTCATATAGAAAATTAACTCAGA
TACATTCACAACTTCAACAAAACATAAATATGAGGGAATACAAGCTTGTC
GTTTTAGGATCTGGTGGTGTCGGTAAATCTGCCCTGTCTATGATTATTTA
TCCCTTGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015769XLOC_015769Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027899-proteinTCONS_00027899-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027899-exon-sc0000653-1575043694:170654..170679TCONS_00027899-exon-sc0000653-1575043694:170654..170679Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1575043694:170232..170327TCONS_00027899-exon-sc0000653-1575043694:170232..170327Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1575043694:164294..164362TCONS_00027899-exon-sc0000653-1575043694:164294..164362Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1575043694:163879..163935TCONS_00027899-exon-sc0000653-1575043694:163879..163935Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1575043694:163463..163603TCONS_00027899-exon-sc0000653-1575043694:163463..163603Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1575043694:161789..161886TCONS_00027899-exon-sc0000653-1575043694:161789..161886Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1575043694:156074..156844TCONS_00027899-exon-sc0000653-1575043694:156074..156844Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:170654..170679TCONS_00027899-exon-sc0000653-1510915933:170654..170679Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:170232..170327TCONS_00027899-exon-sc0000653-1510915933:170232..170327Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:164294..164362TCONS_00027899-exon-sc0000653-1510915933:164294..164362Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:163879..163935TCONS_00027899-exon-sc0000653-1510915933:163879..163935Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:163463..163603TCONS_00027899-exon-sc0000653-1510915933:163463..163603Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:161789..161886TCONS_00027899-exon-sc0000653-1510915933:161789..161886Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1510915933:156074..156844TCONS_00027899-exon-sc0000653-1510915933:156074..156844Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:170654..170679TCONS_00027899-exon-sc0000653-1491911889:170654..170679Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:170232..170327TCONS_00027899-exon-sc0000653-1491911889:170232..170327Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:164294..164362TCONS_00027899-exon-sc0000653-1491911889:164294..164362Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:163879..163935TCONS_00027899-exon-sc0000653-1491911889:163879..163935Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:163463..163603TCONS_00027899-exon-sc0000653-1491911889:163463..163603Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:161789..161886TCONS_00027899-exon-sc0000653-1491911889:161789..161886Clytia hemisphaericaexon
TCONS_00027899-exon-sc0000653-1491911889:156074..156844TCONS_00027899-exon-sc0000653-1491911889:156074..156844Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000653supercontigsc0000653:156074..170679 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
183.611	200.652	200.023	194.982	797.623	607.46	685.499	675.299	333.019	388.922	267.818	225.428	192.087	180.301	172.223	158.68	169.212	184.07	207.718	197.392	147.388	139.971	109.294	112.885	116.431	138.386	212.123	180.008	104.38	105.661
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR020849Small_GTPase_Ras
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
cellular_component GO:0016020 membrane
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Blast
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BLAST of TCONS_00027899 vs. Swiss-Prot (Human)
Match: RAP1B (Ras-related protein Rap-1b OS=Homo sapiens GN=RAP1B PE=1 SV=1)

HSP 1 Score: 291.967 bits (746), Expect = 5.793e-97
Identity = 158/185 (85.41%), Postives = 168/185 (90.81%), Query Frame = 3 
Query:   66 MREYXXXXXXXXXXXXXALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQAMLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQILRVKDTEDVPMVLVGNKCDLEDERVVGKDNGQNLAKQFGNCTFLETSAKMKINVNEIFHDLVRQINQRQPVTRPGKKASGGKSKC 620
            MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVD QQ MLEILDTAGTEQFTAMRDLYMKNGQGF LVYSITAQSTFNDL DLR+QILRVKDT+DVPM+LVGNKCDLEDERVVGK+ GQNLA+Q+ NC FLE+SAK KINVNEIF+DLVRQIN++ PV  PGK     KS C
Sbjct:    1 MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPV--PGKARK--KSSC 181
The following BLAST results are available for this feature:
BLAST of TCONS_00027899 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAP1B5.793e-9785.41Ras-related protein Rap-1b OS=Homo sapiens GN=RAP1... [more]
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