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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028099 ID=TCONS_00028099|Name=TCONS_00028099|organism=Clytia hemisphaerica|type=transcript|length=1486bp
NTTGACTGTTGCTAAACAAGGCAAAACGCTCGGTGCATACAAGTTATCCA
GATATGCTTTTGATAAACTTCAGACGATGAGAGTACCACAACGTTTCCAA
CAAAACATTGATGTTGGTAGTATGACCATCAGATCAAAACCTTTCCAAGA
TAACCAGGATTTACTTTCGATGTGTTATCGATGCTCAACGACTAACCCAT
TGTTAAATAACAAAGGGAATCAATGCATCAATTGTTCTCAACCATTCATC
CATTCATTCATTGGATTTGAGGTGTTACCACTGGTtgagttcattttgga
agatgGTATCAGTGATGAAGAGGCAGTACGTTTGATCAAGATGGACTCAC
TTTCCGGAAGCTCACCGCGTGATCACTGGCAGGAGTCTGGAAACGACCAA
TCACAAAGCATGCGTTTAGAAAACGATACAGGTGGTCTTGACGAAGATGA
TGACCCATTCACTTCCAAACTCATGTCTTTTGATCAAGGTGGTGGCCAGT
ACCAACCAGTGGTCATTGGTCAAAACACCCTCAAAAAGTTGTCTCGAACA
ACGGTCTTTATCAAGGAATGGCAAGCACCGCTGAGATATCAATATTACAG
GAATTTGATTCCAGAGATTTCGATTACTATGTGTAAATCGTGTTGGAGGA
TGTACCACGCAGAAGATTTCGAATTGCTGATGCTTCAAAATGGTTGTTGT
CCTTTCTGCCGTGGTAAACAATAAAATAAGATGATTAAGTGCTTTTACTA
CATTTTCTTCAAAACACTTTGTCTGtactttttgcttaaaatttcagGGT
TAAGAATCCATGGTGATGGTGATGAACAATCTTCCTGAATAAGAATGAAT
AAAGTTTGAGGGATCagttctcttttttttgaaaatcttggaaactcatt
tttatacaaattctATAATCAATCAGCCTCTCTGTCAATGCAGTACTCAA
AAGTTCATTTCATATCAAACCCAATTCTAGGGAGAAGCTTATAGGAAATT
AGATTGTTACCAAAGTGAGAGGGTGGACTTCGTTGAATTTTAAATATTAG
AAATATCAATATAATAGTATGAATACTAAGGGATGGTGGTGTCAGGTAGT
ACCTAAGGCTCGGTTGTCTTTTCAAACTACAAGACCGTATGGTCGGCTCC
AAGAATAGGAATGCTAAGAGCCTTCATTGTTAAACACTGAATATAGAAGG
GTACATCTTCCCATCCAATTATATCGTTAATTTTGTCTGTATATAATGGT
AAATAAGGGGAGTTTTTATTGTATCATaattaaaaatattgatattgatT
TTAAATGATTAGAAAGGTAAAATGgcgatgttttttttatatattcaaTT
GCATGGCGAATATGTATTGTATCAACCTAACTTTGTgtaattagtttttt
tctttaacatgtacaattttaaattataaGTATGAAATAAGATATTGCCC
GGAAGCGGTAAATGTTCTAAGAAAGCGTTGTTTTTT Run BLAST on NCBI protein sequence of TCONS_00028099-protein >TCONS_00028099-protein ID=TCONS_00028099-protein|Name=TCONS_00028099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=240bp
LTVAKQGKTLGAYKLSRYAFDKLQTMRVPQRFQQNIDVGSMTIRSKPFQD
NQDLLSMCYRCSTTNPLLNNKGNQCINCSQPFIHSFIGFEVLPLVEFILE
DGISDEEAVRLIKMDSLSGSSPRDHWQESGNDQSQSMRLENDTGGLDEDD
DPFTSKLMSFDQGGGQYQPVVIGQNTLKKLSRTTVFIKEWQAPLRYQYYR
NLIPEISITMCKSCWRMYHAEDFELLMLQNGCCPFCRGKQ Run BLAST on NCBI transcript from alignment at sc0000664:86535..92479+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028099 ID=TCONS_00028099|Name=TCONS_00028099|organism=Clytia hemisphaerica|type=transcript|length=5945bp|location=Sequence derived from alignment at sc0000664:86535..92479+ (Clytia hemisphaerica)
NTTGACTGTTGCTAAACAAGGCAAAACGCTCGGTGCATACAAGTTATCCA
GATATGCTTTTGATAAACTTCAGGTATGTCCTCATTTTTAATAATACTCT
CACACTACTCTGCTTAGATTCTTACCAAAATAAACAGCGGTAATATTCTG
CAACATACATAGTATTTTCAGGTGCTTAAAAGAGTTTTTTACTCAATTCT
AAGACCCTGCAGTGTCTGTCACCTCCAAACCAAACCTATCAAAACAAAGA
CTACCTAGAAGTCCAAGGCTTAGGAATCAGTAGGCTTTTCTTCCAGACCA
TTCTTCTATCTGGAGAAACTCTGAAATTAAGATCAGCTGTGTAACTCAGG
CCAAATTCTAGAAAGGCAGGAAAGTGTCCGGTGGTGACCATAAAAATGGC
CTGTAAGTTTTCTTATGGTAAtaataaaattataattttttaataaattt
gtattttgtatGTCTTAACAAAATTTTGTATGTCTAACCAAACAGACGAT
GAGAGTACCACAACGTTTCCAACAAAACATTGATGTTGGTAGTATGACCA
TCAGATCAAAACCTTTCCAAGATAACCAGGTAATAATCAAACATCGTGAT
GGCTGCACAGTGTTTCTTCGGAAAGAACGAATTAGTAGTGTTCTCTTTAT
ATATCCTAGtacatataatttttgaaagaaaaattgaagaagagagTTGC
CTCTGTTTTTAGTCTGGCCTTGCAGGGCCTCAAAGGctttcttgaaaata
ttttttatgaaatagaaAGAAGgcgcctctatgctgacaaGGCAGAATTT
CTCATCgttttgttatcaaaattacTGCGTAAGCAAATGGTGGGAGACAC
CTTAAATGATGTCTTTTATGAGAGAGATGTGTCTTTATTCGTAAGAAACT
GATAACTGAACAATATTTCATTCAACCTCTTAAGGATTTACTTTCGATGT
GTTATCGATGCTCAACGACTAACCCATTGTTAAATAACAAAGGGAATCAA
TGCATCAATTGTTCTCAACCATTCATCCATTCATTCATTGGATTTGGTAT
GTCATTCACTCGTTAAAGACCTTTTTTAGTctatttaattaatttttttt
ttgtattgagTAACAGACCAAGCTCCCCCGACATTCAACGAGATTTTTTT
GTAGATTGCTATAGTAATCGGTCCGAGAGTTTACCACCCCGAATATGGgc
aattttagaaaatcttgcTGTAACAAACTGCATTGTAAAGTGACGTGCTT
TACATGAAGAATATCTGGACTGAGGTTGTCAAAAAGGGATAACCCTCTTG
TTGGTGGAGAACTGCTCTGTGTGCAAAAAAACGATAACTGTTCCAATGAG
GTTACCTTcttaattttgcttttttctttgCAGAGGTGTTACCACTGGTt
gagttcattttggaagatgGTATCAGGTATCTCCTATCATTTACACCCCG
CTGCTCTTTATAATTACCACTGATTTTTGCTCCTAATGAAGTAAATGATT
TGAAGCTAGTAAACCACCGGTTGATACACGAATATTGAAAAGAGAATTTC
GTAAAAAATTAGATTGTTACGGAACAGCCAGacacaaaattctttttttt
cacggGCCACCGAGTAGTAATAATTCAAGTTTATTAAATTGGTATTATTT
TTCTCTGGGCTTACCATAAAGCAGCGCTTTTTAACCAAACAAGACTAGTA
CAGATAGTTTTATTGTCCACTGATTTACTGTGTCAAATGTCTTCGTTTCA
TCAACTAACTTATTCCATTTCATTATATTCACCCAGTGATGAAGAGGCAG
TACGTTTGATCAAGATGGACTCACTTTCCGGAAGCTCACCGCGTGATCAC
TGGCAGGAGTCTGGAAACGACCGTGAGTCACATTTCATTGGTTAAaatag
gtcacagtgtggatctaaaccacactgaaacgaccgccttccatcacgca
tcacgctcgcaNNNNNNNNTACaaccaggctatttagagcaactAAGCTT
GTGATAGcttaaaatcttttcaaaaattcataagcGGTGTGAAACGTTTA
TTCGGGACATTAGAGTAGATAACTTGTTCAATTCAAACTAGTTACTTTTA
CATgggtaattttgattttgatatggtTTTTGGGTACGAACACATGATTA
TAATTTCTCTCTTCGAAACTAAGACTTTAGCCCTCATGCTTCGAGATCCT
TATCTTGTTACAATCAATAATTGTTTAACTTTTACATAACAAATATTGTC
TATTTCACAGAATCACAAAGCATGCGTTTAGAAAACGATACAGGTGGTCT
TGACGAAGATGATGACCCATTCACTTCCAAACTCATGTCTTTTGATCAAG
GTGGTGGCCAGTACCAACCAGTGGTCATTGGTCAAAACACCCTCAAAAAG
TTGTCTCGAACAACGGTCTTTATCAAGGAATGGCAAGCACCGCTGAGATA
TCAATATTACAGGAATTTGATTCCAGAGATTTCGATTACTATGTGTAAAT
CGTGTTGGAGGGTAGGTCTTTTTATGTTCTTTCTTCCTGTTTAGGTTTTT
GGAATAAACTTGGATTTTGATACCATTCTGGGCATTAAGTATATTTTACT
GTAAATATTACCGTATTTTTGAGGAGTGATGGCCGAAAGGTCAAGTCCTA
TATTGCTTGCTACCCACGTTAAATATCGACTCCATCTAATATCGACTATC
TTTATAGATTCTATGAAATTTTAGGTTCACCTTATAAAAATTAGCTTTcg
aactttttaaatatttgattagttgaaaatgaaaaatattcgGGCTCaac
cgggattcgaacccggggcctctcgcacccaaagcgagaatcataccact
agaccattgagccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNCCCCCCCCCCGGTTTGCGTGTTTGATTTATAGAGACACTGCATAC
TTAGAGACACTGTGCATTATGCCATTCCTCTGAACTTGAATGTTTCGTGT
ATTTTTAGATGTACCACGCAGAAGATTTCGAATTGCTGATGCTTCAAAAT
GGTTGTTGTCCTTTCTGCCGTGGTAAACAATAAAATAAGATGATTAAGTG
CTTTTACTACATTTTCTTCAAAACACTTTGTCTGtactttttgcttaaaa
tttcagGGTTAAGAATCCATGGTGATGGTGATGAACAATCTTCCTGAATA
AGAATGAATAAAGTTTGAGGGATCagttctcttttttttgaaaatcttgg
aaactcatttttatacaaattctATAATCAATCAGCCTCTCTGTCAATGC
AGTACTCAAAAGTTCATTTCATATCAAACCCAATTCTAGGGAGAAGCTTA
TAGGAAATTAGATTGTTACCAAAGTGAGAGGGTGGACTTCGTTGAATTTT
AAATATTAGAAATATCAATATAATAGTATGAATACTAAGGGATGGTGGTG
TCAGGTAGTACCTAAGGCTCGGTTGTCTTTTCAAACTACAAGACCGTATG
GTCGGCTCCAAGAATAGGAATGCTAAGAGCCTTCATTGTTAAACACTGAA
TATAGAAGGGTACATCTTCCCATCCAATTATATCGTTAATTTTGTCTGTA
TATAATGGTAAATAAGGGGAGTTTTTATTGTATCATaattaaaaatattg
atattgatTTTAAATGATTAGAAAGGTAAAATGgcgatgttttttttata
tattcaaTTGCATGGCGAATATGTATTGTATCAACCTAACTTTGTgtaat
tagtttttttctttaacatgtacaattttaaattataaGTATGAAATAAG
ATATTGCCCGGAAGCGGTAAATGTTCTAAGAAAGCGTTGTTTTTT Coding sequence (CDS) from alignment at sc0000664:86535..92479+ >TCONS_00028099 ID=TCONS_00028099|Name=TCONS_00028099|organism=Clytia hemisphaerica|type=CDS|length=5061bp|location=Sequence derived from alignment at sc0000664:86535..92479+ (Clytia hemisphaerica)
TTGACTGTTGCTAAACAAGGCAAAACGCTCGGTGCATACAAGTTATCCAG
ATATGCTTTTGATAAACTTCAGACGATGAGAGTACCACAACGTTTCCAAC
AAAACATTGATGTTGGTAGTATGACCATCAGATCAAAACCTTTCCAAGAT
AACCAGGATTTACTTTCGATGTGTTATCGATGCTCAACGACTAACCCATT
GTTAAATAACAAAGGGAATCAATGCATCAATTGTTCTCAACCATTCATCC
ATTCATTCATTGGATTTGAGGTGTTACCACTGGTtgagttcattttggaa
gatgGTATCAGTGATGAAGAGGCAGTACGTTTGATCAAGATGGACTCACT
TTCCGGAAGCTCACCGCGTGATCACTGGCAGGAGTCTGGAAACGACCAAT
CACAAAGCATGCGTTTAGAAAACGATACAGGTGGTCTTGACGAAGATGAT
GACCCATTCACTTCCAAACTCATGTCTTTTGATCAAGGTGGTGGCCAGTA
CCAACCAGTGGTCATTGGTCAAAACACCCTCAAAAAGTTGTCTCGAACAA
CGGTCTTTATCAAGGAATGGCAAGCACCGCTGAGATATCAATATTACAGG
AATTTGATTCCAGAGATTTCGATTACTATGTGTAAATCGTGTTGGAGGAT
GTACCACGCAGAAGATTTCGAATTGCTGATGCTTCAAAATGGTTGTTGTC
CTTTCTGCCGTGGTAAACAATAATTGACTGTTGCTAAACAAGGCAAAACG
CTCGGTGCATACAAGTTATCCAGATATGCTTTTGATAAACTTCAGACGAT
GAGAGTACCACAACGTTTCCAACAAAACATTGATGTTGGTAGTATGACCA
TCAGATCAAAACCTTTCCAAGATAACCAGGATTTACTTTCGATGTGTTAT
CGATGCTCAACGACTAACCCATTGTTAAATAACAAAGGGAATCAATGCAT
CAATTGTTCTCAACCATTCATCCATTCATTCATTGGATTTGAGGTGTTAC
CACTGGTtgagttcattttggaagatgGTATCAGTGATGAAGAGGCAGTA
CGTTTGATCAAGATGGACTCACTTTCCGGAAGCTCACCGCGTGATCACTG
GCAGGAGTCTGGAAACGACCAATCACAAAGCATGCGTTTAGAAAACGATA
CAGGTGGTCTTGACGAAGATGATGACCCATTCACTTCCAAACTCATGTCT
TTTGATCAAGGTGGTGGCCAGTACCAACCAGTGGTCATTGGTCAAAACAC
CCTCAAAAAGTTGTCTCGAACAACGGTCTTTATCAAGGAATGGCAAGCAC
CGCTGAGATATCAATATTACAGGAATTTGATTCCAGAGATTTCGATTACT
ATGTGTAAATCGTGTTGGAGGATGTACCACGCAGAAGATTTCGAATTGCT
GATGCTTCAAAATGGTTGTTGTCCTTTCTGCCGTGGTAAACAATAATTGA
CTGTTGCTAAACAAGGCAAAACGCTCGGTGCATACAAGTTATCCAGATAT
GCTTTTGATAAACTTCAGACGATGAGAGTACCACAACGTTTCCAACAAAA
CATTGATGTTGGTAGTATGACCATCAGATCAAAACCTTTCCAAGATAACC
AGGATTTACTTTCGATGTGTTATCGATGCTCAACGACTAACCCATTGTTA
AATAACAAAGGGAATCAATGCATCAATTGTTCTCAACCATTCATCCATTC
ATTCATTGGATTTGAGGTGTTACCACTGGTtgagttcattttggaagatg
GTATCAGTGATGAAGAGGCAGTACGTTTGATCAAGATGGACTCACTTTCC
GGAAGCTCACCGCGTGATCACTGGCAGGAGTCTGGAAACGACCAATCACA
AAGCATGCGTTTAGAAAACGATACAGGTGGTCTTGACGAAGATGATGACC
CATTCACTTCCAAACTCATGTCTTTTGATCAAGGTGGTGGCCAGTACCAA
CCAGTGGTCATTGGTCAAAACACCCTCAAAAAGTTGTCTCGAACAACGGT
CTTTATCAAGGAATGGCAAGCACCGCTGAGATATCAATATTACAGGAATT
TGATTCCAGAGATTTCGATTACTATGTGTAAATCGTGTTGGAGGATGTAC
CACGCAGAAGATTTCGAATTGCTGATGCTTCAAAATGGTTGTTGTCCTTT
CTGCCGTGGTAAACAATAATTGACTGTTGCTAAACAAGGCAAAACGCTCG
GTGCATACAAGTTATCCAGATATGCTTTTGATAAACTTCAGACGATGAGA
GTACCACAACGTTTCCAACAAAACATTGATGTTGGTAGTATGACCATCAG
ATCAAAACCTTTCCAAGATAACCAGGATTTACTTTCGATGTGTTATCGAT
GCTCAACGACTAACCCATTGTTAAATAACAAAGGGAATCAATGCATCAAT
TGTTCTCAACCATTCATCCATTCATTCATTGGATTTGAGGTGTTACCACT
GGTtgagttcattttggaagatgGTATCAGTGATGAAGAGGCAGTACGTT
TGATCAAGATGGACTCACTTTCCGGAAGCTCACCGCGTGATCACTGGCAG
GAGTCTGGAAACGACCAATCACAAAGCATGCGTTTAGAAAACGATACAGG
TGGTCTTGACGAAGATGATGACCCATTCACTTCCAAACTCATGTCTTTTG
ATCAAGGTGGTGGCCAGTACCAACCAGTGGTCATTGGTCAAAACACCCTC
AAAAAGTTGTCTCGAACAACGGTCTTTATCAAGGAATGGCAAGCACCGCT
GAGATATCAATATTACAGGAATTTGATTCCAGAGATTTCGATTACTATGT
GTAAATCGTGTTGGAGGATGTACCACGCAGAAGATTTCGAATTGCTGATG
CTTCAAAATGGTTGTTGTCCTTTCTGCCGTGGTAAACAATAATTGACTGT
TGCTAAACAAGGCAAAACGCTCGGTGCATACAAGTTATCCAGATATGCTT
TTGATAAACTTCAGACGATGAGAGTACCACAACGTTTCCAACAAAACATT
GATGTTGGTAGTATGACCATCAGATCAAAACCTTTCCAAGATAACCAGGA
TTTACTTTCGATGTGTTATCGATGCTCAACGACTAACCCATTGTTAAATA
ACAAAGGGAATCAATGCATCAATTGTTCTCAACCATTCATCCATTCATTC
ATTGGATTTGAGGTGTTACCACTGGTtgagttcattttggaagatgGTAT
CAGTGATGAAGAGGCAGTACGTTTGATCAAGATGGACTCACTTTCCGGAA
GCTCACCGCGTGATCACTGGCAGGAGTCTGGAAACGACCAATCACAAAGC
ATGCGTTTAGAAAACGATACAGGTGGTCTTGACGAAGATGATGACCCATT
CACTTCCAAACTCATGTCTTTTGATCAAGGTGGTGGCCAGTACCAACCAG
TGGTCATTGGTCAAAACACCCTCAAAAAGTTGTCTCGAACAACGGTCTTT
ATCAAGGAATGGCAAGCACCGCTGAGATATCAATATTACAGGAATTTGAT
TCCAGAGATTTCGATTACTATGTGTAAATCGTGTTGGAGGATGTACCACG
CAGAAGATTTCGAATTGCTGATGCTTCAAAATGGTTGTTGTCCTTTCTGC
CGTGGTAAACAATAATTGACTGTTGCTAAACAAGGCAAAACGCTCGGTGC
ATACAAGTTATCCAGATATGCTTTTGATAAACTTCAGACGATGAGAGTAC
CACAACGTTTCCAACAAAACATTGATGTTGGTAGTATGACCATCAGATCA
AAACCTTTCCAAGATAACCAGGATTTACTTTCGATGTGTTATCGATGCTC
AACGACTAACCCATTGTTAAATAACAAAGGGAATCAATGCATCAATTGTT
CTCAACCATTCATCCATTCATTCATTGGATTTGAGGTGTTACCACTGGTt
gagttcattttggaagatgGTATCAGTGATGAAGAGGCAGTACGTTTGAT
CAAGATGGACTCACTTTCCGGAAGCTCACCGCGTGATCACTGGCAGGAGT
CTGGAAACGACCAATCACAAAGCATGCGTTTAGAAAACGATACAGGTGGT
CTTGACGAAGATGATGACCCATTCACTTCCAAACTCATGTCTTTTGATCA
AGGTGGTGGCCAGTACCAACCAGTGGTCATTGGTCAAAACACCCTCAAAA
AGTTGTCTCGAACAACGGTCTTTATCAAGGAATGGCAAGCACCGCTGAGA
TATCAATATTACAGGAATTTGATTCCAGAGATTTCGATTACTATGTGTAA
ATCGTGTTGGAGGATGTACCACGCAGAAGATTTCGAATTGCTGATGCTTC
AAAATGGTTGTTGTCCTTTCTGCCGTGGTAAACAATAATTGACTGTTGCT
AAACAAGGCAAAACGCTCGGTGCATACAAGTTATCCAGATATGCTTTTGA
TAAACTTCAGACGATGAGAGTACCACAACGTTTCCAACAAAACATTGATG
TTGGTAGTATGACCATCAGATCAAAACCTTTCCAAGATAACCAGGATTTA
CTTTCGATGTGTTATCGATGCTCAACGACTAACCCATTGTTAAATAACAA
AGGGAATCAATGCATCAATTGTTCTCAACCATTCATCCATTCATTCATTG
GATTTGAGGTGTTACCACTGGTtgagttcattttggaagatgGTATCAGT
GATGAAGAGGCAGTACGTTTGATCAAGATGGACTCACTTTCCGGAAGCTC
ACCGCGTGATCACTGGCAGGAGTCTGGAAACGACCAATCACAAAGCATGC
GTTTAGAAAACGATACAGGTGGTCTTGACGAAGATGATGACCCATTCACT
TCCAAACTCATGTCTTTTGATCAAGGTGGTGGCCAGTACCAACCAGTGGT
CATTGGTCAAAACACCCTCAAAAAGTTGTCTCGAACAACGGTCTTTATCA
AGGAATGGCAAGCACCGCTGAGATATCAATATTACAGGAATTTGATTCCA
GAGATTTCGATTACTATGTGTAAATCGTGTTGGAGGATGTACCACGCAGA
AGATTTCGAATTGCTGATGCTTCAAAATGGTTGTTGTCCTTTCTGCCGTG
GTAAACAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028099-exon-sc0000664-1491911889:86535..86607 | TCONS_00028099-exon-sc0000664-1491911889:86535..86607 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:86535..86607 | TCONS_00028099-exon-sc0000664-1510915933:86535..86607 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:86535..86607 | TCONS_00028099-exon-sc0000664-1575043694:86535..86607 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1491911889:87030..87113 | TCONS_00028099-exon-sc0000664-1491911889:87030..87113 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:87030..87113 | TCONS_00028099-exon-sc0000664-1510915933:87030..87113 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:87030..87113 | TCONS_00028099-exon-sc0000664-1575043694:87030..87113 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1491911889:87469..87580 | TCONS_00028099-exon-sc0000664-1491911889:87469..87580 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:87469..87580 | TCONS_00028099-exon-sc0000664-1510915933:87469..87580 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:87469..87580 | TCONS_00028099-exon-sc0000664-1575043694:87469..87580 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1491911889:87918..87960 | TCONS_00028099-exon-sc0000664-1491911889:87918..87960 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:87918..87960 | TCONS_00028099-exon-sc0000664-1510915933:87918..87960 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:87918..87960 | TCONS_00028099-exon-sc0000664-1575043694:87918..87960 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1491911889:88321..88406 | TCONS_00028099-exon-sc0000664-1491911889:88321..88406 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:88321..88406 | TCONS_00028099-exon-sc0000664-1510915933:88321..88406 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:88321..88406 | TCONS_00028099-exon-sc0000664-1575043694:88321..88406 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1491911889:88795..89045 | TCONS_00028099-exon-sc0000664-1491911889:88795..89045 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:88795..89045 | TCONS_00028099-exon-sc0000664-1510915933:88795..89045 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:88795..89045 | TCONS_00028099-exon-sc0000664-1575043694:88795..89045 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1491911889:91643..92479 | TCONS_00028099-exon-sc0000664-1491911889:91643..92479 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1510915933:91643..92479 | TCONS_00028099-exon-sc0000664-1510915933:91643..92479 | Clytia hemisphaerica | exon |
| TCONS_00028099-exon-sc0000664-1575043694:91643..92479 | TCONS_00028099-exon-sc0000664-1575043694:91643..92479 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000664 | supercontig | sc0000664:86535..92479 + |
Blast
BLAST of TCONS_00028099 vs. Swiss-Prot (Human)
Match: IF122 (Intraflagellar transport protein 122 homolog OS=Homo sapiens GN=IFT122 PE=1 SV=2) HSP 1 Score: 258.455 bits (659), Expect = 3.761e-75 Identity = 130/238 (54.62%), Postives = 182/238 (76.47%), Query Frame = 2
Query: 2 LTVAKQGKTLGAYKLSRYAFDKLQTMRVPQRFQQNIDVGSMTIRSKPFQDNQDLLSMCYRCSTTNPLLNNKGNQCINCSQPFIHSFIGFEVLPLVEFILEDGISDEEAVRLIKMDSLSGSSPRDHWQ-ESGNDQSQSMRLENDTGGLDEDDDPFTSKLMSFDQGGGQYQPVVIGQNTLKKLSRTTVFIKEWQAPLRYQYYRNLIPEISITMCKSCWRMYHAEDFELLMLQNGCCPFCR 712
T+AKQ K LGAY+L+R+A+DKL+ + +P RFQ++I++G++TIR+KPF D+++L+ +CYRCST NPLLNN GN CINC QPFI S ++VL LVEF LE+GI+DEEA+ LI ++ L RD Q E N+ SQ +RL + D+DPFT+KL SF+QGG ++ PVV+ + L+ +SR V IK W PLR+QY+R+L+P+ SITMC SC++M+H+ED+ELL+LQ+GCCP+CR
Sbjct: 1000 FTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPFHDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIFSASSYDVLHLVEFYLEEGITDEEAISLIDLEVL--RPKRDDRQLEIANNSSQILRLVETKDSIG-DEDPFTAKL-SFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASITMCPSCFQMFHSEDYELLVLQHGCCPYCR 1233
The following BLAST results are available for this feature:
|
