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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028402 ID=TCONS_00028402|Name=TCONS_00028402|organism=Clytia hemisphaerica|type=transcript|length=3358bp
TTTTTAAAAGCCTGCATTTTCTGGGTTGTCTACAGGGTCTGTCTCAGTAA
GAGATATATAAAGGAGGGGGGTCatataattttattttacttaCATCTTT
TTAAGCCTATGGATGTTGTTAAGTATTTGGGTTTTAATATATAATGTATA
ATTGCCAAAAGACAGTGTTtcaccttaaaggaagaaattctagtggaaag
aaaatttggcggatttggccagaatccgccaaattcagttcccgcaaaaa
attcttttttttccgccatccgccaaattaaattcccgccaaattaaact
ttttgaaatgagGATTTCtttaaaggtgtttttgcatttttcttttgctg
tttttacgccattttaaggataaaattttcagcaaacgccaaattaaatt
cccgccaaatttagttttttcgtccatccaccaaattaaattccatctaa
aaaactttttcggccatccgccaaattaaattgccgccaaaatttcttcc
tttaaggtatttggatactgaaaaaatcattttttcttaaaaaataatgt
ttgtatttacagaaaaagtaaGTAATTAATTAAACTCTTTGTTAAATATT
CAACAATACCTAGCATTCTAATATTTACAAGTGAATGCTTGAACTTTCTG
TGGTGACAGTGACAATTTTGTAAAGACAAGAGTATTTGGTGTGGCATTAT
CAAATAaattgtcaaatatttttcagattcaatCAAAACAGACTGAATGA
TCACAGCTAAAAAATCATTGACAAACATAGTGTAGTAATTTATCCAGACT
TGAACAATAGAATAGCAACTTGTCccatgtaaaaataaataaaatgtttt
gtttcatGAGTAACATAAGAGCCAAAGTTTCTGCCAACAATACAATGCCA
GGTTGggttgtattttttatcaaattctttcttAATGTAAGCAGCAATGT
CTTTTTCAATGTTAAATTTTTCCATGGCTTGTGTTGTACATTCAATGGCA
TCTTGCTGCATCTCTTCTGACATATCAGCATTTTTGACGATAGCTTTACG
TTCAGACATctgcaaaataaaaattaaagatttgTGAAGCAGAAACAGTG
ATGAACTCTCTAAAAAACTGTCAACCCAAGACCCGTTTAATCATCCAACA
TGACATTGTCTCTAGCAAAAGATATATGTGCGAATGGTAAGGATTGGTTA
GTTCTACCTCTAAAAGGGGAACCATTCAAGCATGAACGTCCACACTGCTT
TCTATAGTGTAAATAatacacaaatttttttttattagaacttcTGAAAT
TTTCAAGGGTAAAAATGGACACAAAATACACAATTTGACATAAAAAGTGA
AATATCCAACCTTGTAGCTTCACGGCCTGCAAGGTTTCAGATGATTTCTC
CTTTCTTCTATACGAATGGTCAACTAATGACACCATATAGTCACAAGAAG
agttaattttgtttttatggTAGATATGATTTCTCTTACTCAATTACATC
ATATTTTGGAGATTCAACCAATtagattgatttgattgttcATCGGACTT
TTGGAAGGTCGATCACCATGACAaatcaattttgatttgttaAAATACAT
TCCGATTTAAGAACGACAAAATTACCTACAGTGCATTGCAAATAACAAAG
GATGGTCTGAAACCATTTGCGATCGacacataaatttttttttcaatgaa
ctGTTTCTGAGCCATCTTCCAAATCAAGTTTAATTCTCGGAAATAGACTA
CCTCGGGTTTACGAATGGAAAGacacaatttttctttcaaactgaaaatt
atcGCATCGATTTTCTCCATCAACTAATCTGCTAGTGTAGTAGTACAGGA
AAGGAAGTCACCATCTATTGTCTATCCCGATCCGATTTTCCATGGCTCAG
CAAAATACCGCTTATGATGAAAAGGTTCGTCAGGAGCTCGAGTGCTCGAT
TTGCATAGATCAATACCAGAAACCTAAACTTTTGGGTTGTATGCACACGT
TTTGTGAACCTTGTATAACGAGGCTGATTAAAAATGGAACAATATCTTGT
CCTCAATGCAGACAAGTTTCAAAGGTTCCAAATGGTGTATCAGGGCTATC
TACCAATTATATTGCTCAAAACATCATCGAAAAGCTGAAAACATCTGCAA
GAGGAAATCAACCATGTTGTCATGACTGTGCTAATGGAATACCTGCCACA
AACCATTGCAAAAATTGTGTTCTCAATTTATGTAAAGATTGTACAAATTA
TCATCAAAGATGTGTTCGCTTTGTTGGCCATTGTATTGTCGCAGTTTCGT
CCGTCTCACAGGAATCTGTCAACCAAGTTCGATACTGCGCCAAACATAAA
GAGCTACTCAAATATTTTTGTGAGAATTGTAAGGTGGTTGTTTGTAATGA
CTGCATGATTAGCAATCAACATAAACAACATTCCATGTCACTTATCACCG
AGGCTAAAgagaaagcaaaaaaagaattgaaacaaaAGCTGTTAAAAGGC
CTGGAATGTAAACAAAATTTGCTCAATACTCACAAAGaaggtgaaaattt
taaaaaaagagtTGAGGCTGCCGAAGATAAATCTGTCTTGTTGGTCAAGA
AGGTTTTTGTCGAAATTAGAAAAGAAGTAGCTAAGAGAGAAAAGCAATTG
GTTGACCAAATTAAAAAGGAGAGTAATTTCCAATCATTTGATAAATTCTC
AACGGCCTTAAAGAAGATATCGGATTCTTTAGAATATGTGAAAGAAGTGA
TGAAAAATGACAACTATGACAACATGGAGATTATCATGGATTTATCGAAT
CATTTGGACTTGCTGGATAAAGAATttgatttcaataaaaaatatcattc
tTACGAAAATCCCAACCAGCATCATCATCAAAACCAAATGCATGGAGGTC
TATATTACAGTCAGCATCAACACCAGCAACACCAACCGTTACTTATCAAA
CCACAgcaaaacaaagtttttatcTGTGAGCAAAAAGGGAATATACATCA
TCAAAGTTATCATCAGGCGACAAGCACTAATAATTTATCATTCCAAATGA
CTTTGGTTGAACGTGATTTGGCTCCAAATCGTAATCATAAAATAACCCAA
AATTTAAACGAGTTTCAGATTTGAATAATATTtgattaccttaaaggaag
aataAGCAGTTTCACCCAAAATCTGTCAAATCAAGTTTCCCCCAGGATTT
GTTTCTTCCACCATCCACCATCATTTCAACATTCCCTAAACATAGCTGTT
CTAGTTTCAAAAAAGGATCCCCCAAACAAAATATCACCAAATTTAATTCC
CTTTAAAAAAGACTTTTGTCAGCCACCAAATCACATTattaacccggggg
gggggggg Run BLAST on NCBI protein sequence of TCONS_00028402-protein >TCONS_00028402-protein ID=TCONS_00028402-protein|Name=TCONS_00028402-protein|organism=Clytia hemisphaerica|type=polypeptide|length=410bp
MAQQNTAYDEKVRQELECSICIDQYQKPKLLGCMHTFCEPCITRLIKNGT
ISCPQCRQVSKVPNGVSGLSTNYIAQNIIEKLKTSARGNQPCCHDCANGI
PATNHCKNCVLNLCKDCTNYHQRCVRFVGHCIVAVSSVSQESVNQVRYCA
KHKELLKYFCENCKVVVCNDCMISNQHKQHSMSLITEAKEKAKKELKQKL
LKGLECKQNLLNTHKEGENFKKRVEAAEDKSVLLVKKVFVEIRKEVAKRE
KQLVDQIKKESNFQSFDKFSTALKKISDSLEYVKEVMKNDNYDNMEIIMD
LSNHLDLLDKEFDFNKKYHSYENPNQHHHQNQMHGGLYYSQHQHQQHQPL
LIKPQQNKVFICEQKGNIHHQSYHQATSTNNLSFQMTLVERDLAPNRNHK
ITQNLNEFQI Run BLAST on NCBI transcript from alignment at sc0000676:131944..143720- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028402 ID=TCONS_00028402|Name=TCONS_00028402|organism=Clytia hemisphaerica|type=transcript|length=11777bp|location=Sequence derived from alignment at sc0000676:131944..143720- (Clytia hemisphaerica)
TTTTTAAAAGCCTGCATTTTCTGGGTTGTCTACAGGGTCTGTCTCAGTAA
GAGATATATAAAGGAGGGGGGTCATATAATTTTATTTTACTTACATCTTT
TTAAGCCTATGGATGTTGTTAAGTATTTGGGTTTTAATATATAATGTATA
ATTGCCAAAAGACAGTGTTTCACCTTAAAGGAAGAAATTCTAGTGGAAAG
AAAATTTGGCGGATTTGGCCAGAATCCGCCAAATTCAGTTCCCGCAAAAA
ATTCTTTTTTTTCCGCCATCCGCCAAATTAAATTCCCGCCAAATTAAACT
TTTTGAAATGAGGATTTCTTTAAAGGTGTTTTTGCATTTTTCTTTTGCTG
TTTTTACGCCATTTTAAGGATAAAATTTTCAGCAAACGCCAAATTAAATT
CCCGCCAAATTTAGTTTTTTCGTCCATCCACCAAATTAAATTCCATCTAA
AAAACTTTTTCGGCCATCCGCCAAATTAAATTGCCGCCAAAATTTCTTCC
TTTAAGGTATTTGGATACTGAAAAAATCATTTTTTCTTAAAAAATAATGT
TTGTATTTACAGAAAAAGTAAGTAATTAATTAAACTCTTTGTTAAATATT
CAACAATACCTAGCATTCTAATATTTACAAGTGAATGCTTGAACTTTCTG
TGGTGACAGTGACAATTTTGTAAAGACAAGAGTATTTGGTGTGGCATTAT
CAAATAAATTGTCAAATATTTTTCAGATTCAATCAAAACAGACTGAATGA
TCACAGCTAAAAAATCATTGACAAACATAGTGTAGTAATTTATCCAGACT
TGAACAATAGAATAGCAACTTGTCCCATGTAAAAATAAATAAAATGTTTT
GTTTCATGAGTAACATAAGAGCCAAAGTTTCTGCCAACAATACAATGCCA
GGTTGGGTTGTATTTTTTATCAAATTCTTTCTTAATGTAAGCAGCAATGT
CTTTTTCAATGTTAAATTTTTCCATGGCTTGTGTTGTACATTCAATGGCA
TCTTGCTGCATCTCTTCTGACATATCAGCATTTTTGACGATAGCTTTACG
TTCAGACATCTGCAAAATAAAAATTAAAGATTTGTGAAGCAGAAACAGTG
ATGAACTCTCTAAAAAACTGTCAACCCAAGACCCGTTTAATCATCCAACA
TGACATTGTCTCTAGCAAAAGATATATGTGCGAATGGTAAGGATTGGTTA
GTTCTACCTCTAAAAGGGGAACCATTCAAGCATGAACGTCCACACTGCTT
TCTATAGTGTAAATAATACACAAATTTTTTTTTATTAGAACTTCTGAAAT
TTTCAAGGGTAAAAATGGACACAAAATACACAATTTGACATAAAAAGTGA
AATATCCAACCTTGTAGCTTCACGGCCTGCAAGGTTTCAGATGATTTCTC
CTTTCTTCTATACGAATGGTCAACTAATGACACCATATAGTCACAAGAAG
AGTTAATTTTGTTTTTATGGTAGATATGATTTCTCTTACTCAATTACATC
ATATTTTGGAGATTCAACCAATTAGATTGATTTGATTGTTCATCGGACTT
TTGGAAGGTCGATCACCATGACAAATCAATTTTGATTTGTTAAAATACAT
TCCGATTTAAGAACGACAAAATTACCTACAGTGCATTGCAAATAACAAAG
GATGGTCTGAAACCATTTGCGATCGACACATAAATTTTTTTTTCAATGAA
CTGTTTCTGAGCCATCTTCCAAATCAAGTTTAATTCTCGGAAATAGACTA
CCTCGGGTTTACGAATGGAAAGACACAATTTTTCTTTCAAACTGAAAATT
ATCGCATCGATTTTCTCCATCAACTAATCTGCTAGTGTAGTAGTACAGGA
AAGGAAGTCACCATCTATTGTCTATCCCGATCCGATTTTCCATGGCTCAG
CAAAATACCGCTTATGATGAAAAGGTTCGTCAGGAGCTCGAGTGCTCGAT
TTGCATAGATCAATACCAGAAACCTAAACTTTTGGGTTGTATGCACACGT
TTTGTGAACCTTGTATAACGAGGCTGATTAAAAATGGAACAATATCTTGT
CCTCAATGCAGACAAGTTTCAAAGGTAAAGTTTATCCATTGGGCCATACT
TGTTTTGGAGAACGTGACGGTCTATTGAATAACTAATTGAGACAAGATAA
TTTATCGCGTTTTCATTTGCTAAAAAGGGAAAGTAATGTATGTGGAGTAA
TACCTGTCGCGTTCTCCAAAACATCTATTGCTATAACTCTGACTGACTCT
AAGGGGTGGTACCTGGGTAAAATGGGTGCCCGCCAGTTATGTGGAAGCCA
TAATAAAGGTCGTCTTTTTTAAAAGTCTCTCAAAGCGAATAGCAATCATG
AAATCTATGCACTACAGTTAGGGAAACCATCCAGGATCCTTCCATTCTAT
CAGCCAGCAAAAACTGAATGACACTTGTAAACTTAAGTTTCTTACCATTT
TCCATCGAAAACAATCGAAAACATTACTACTTCCTGAAGCCGGAGACCAA
AGCAAATGATTTTTTTTGATGAGGGCGCCCTTTTGGATCTATTGTTAACT
CATTTAAAATGGTGGACAGAGTTTCGGAATGACGAAGGCGCCCACTGCTT
CGAGGGTGGTAACGCCAAAACGCCCCATATGACCAGCCAACAGAAGGCGA
GTTTGTTGCCGCGCGAGCAACGTCATGCACTCCACCGTAGCGAAAGCGCG
AACGACATTTCACAATTATAAGAATATCTTATGTGCTTAATTCTATTTGA
CTTTGAGAGCTTCATGGAAGATGAAGAAGTAGAAAGATGAAAAATGCGCT
GGTTGATTTTTTTTAAATAGGTGTGTTCTATCATTGTTGAAAGTTGAAGA
AATTTCTACCGACGCATAATTTTTTTACAGCCAATTAAAGGCACAGTATG
CTTATACCTACTATGTTTGCTATATCATCTAGGCAAAAAACGGTAAAAAA
AGACACAAACACGATTTTTTTATGAGTGTGGTTATGATTTTTTTGATTGC
GGCCGCGTACAGGAACTCGCCAAATGTTCCTAACTGCACTAGGGTCCAAA
AATTACAAAATATATAAAATTGACTCCCTCAAAGGTCAACCCGCGGTCCA
AGGATTGAGCCGAGAACGCCCACGAGCTCCTGTGCGGGTGAAAAACTTTA
ATCTGTCAATCATTTTCTTGAGTGAAGATACGCAAAGCGATTCTAGCTTT
ACGATAGTGCTGCGGGTCATCAGTGGATAGTATTCGAAATTATCATTATC
CCTTTATACCAGACCCGATCAATCGAACTTGTCGAACCAATCGAACAATC
GAACTAATCAAACTCCATCGAACGATTAAAGTTCGATTAAATAAATTAAT
CAAACTCAAAGCTTTTTTAAAAGATTGTGACAGTTACATCAAAATGCCTC
GAAAATGTCAATATGAAAATTGCGTTATCAGAGAACGTATGTCTTGCTCA
TTATAAAAAGGCCGACACAAACTTTCAATAATTGGATTGTAACATCGAGT
TAAGTCTCTTTTGTTAAGTCACCAGGGGGTAAATAAAACAGACCTTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
ATGACTTCTAATGGTACTTTTTCTAACGAGTTTGATTACTCTGTTCTCAC
ACTTATGTCTTTTTTTTTCGCGTCCTTTTCCGTGATTACTTTTATTTATC
TTTTTAAAGACTGGTAAGAAGGCATATTGATGTAACTGTGTGAGTGTTCG
ATTAAGTTCGATCATTGGGTTTCGGTTCGATCAGTTCGATAAACCAATTT
TGTTTGACAAATTTGTGCTGCTCCGCCACCGTATATTAGCTTCTTTTCAA
AGCCAAATTCGGAATGTAAATTGGGAAATTACTTCCGATAACGGATTACA
CACTTTTCCTGTATCCTTTTAGCTCCAGAAGAAGTGGTTTGTTGGGGCGG
ACGTAGTATTCCGCCACTCGGCTGCGCGCGAAATCGTAACAGACTTTTTT
TCCGGATAGACAAATATCCGGGTACAATAAACATCAAGCTGTTAAGTCCG
GGAACTGTCGAAATTGGCAATCGCGTGCCAGGACAAAGTTTTTGCAAGCG
AGGGAAGATATGAGGATTTTAATATCATCGAACTAATCAAACTTTTTACT
GACCGAACTAATCAAACTGCTATTGCTTCAAAAATTGTGAGTGTTCGATT
AGGTTCGATTAATTTTTTTAATCAAACTTTAATCGTTCGATGGAGTTCGA
TTAGTTCGATTGTTCGATTGGTTCGACAAGTTTGATTGATCCAGTCTGGT
TTATATTCATTTCTTGAACTTTTACAAAAAAAAAAATGAAAAATAGAAAA
GTTGTATTTTTTACTGCTCTATTCACATACTGAATTTGAAAGTTCTTCTA
TGTGGCGTTTTTTGCAAGCTTAAAAGCTCTTGCGGGGCGTTTCACAGGCG
TTTCCCAGTGCCTTTTGTGAGCAGACTAAAGGACTGTATACTTACTTCAG
TATACTTCAGTTTGATCTTTTGAACAGCCAGTGATATTTCGTATGTCAGA
GGGAATACTGTTGAAGAGTTTTGGACCCTGTACAGCTAAGCTCTCACAAA
TAAATCTGCGAAAGCTTCTTCGTTCAATTGTTCGTAGTTGGCATTTTTTA
CCATGACGGCTTTAAGTTGAAGACAGACACCACCTTTTACAGTACCGTCT
CCTTCAGTGTGGCTGACATTTGGTACTACACCCTCTAGTATCGACCAAAT
ATAAATAATTCTGTATCTCTCCCTCCTCCTTTGAAGAGAATATATTTTCA
AAATTTTCAATTGTTCCTAATAATCGAAAGCACTAAGGCCTTTGATTTTA
TTGAAGAAGTTCTTTTGTACAGATTCAATCTGTTCAATTTGGTGGATGCT
GTTTGGGGACCAAAGCTGAGAACAGTAGTCGAGGTGAGGGAGAACTAAGG
ATTTCCATAACGTTATCATAACATCACTGTTTCTGTTGTTGAATGTTCTC
AAAATCCAACTAGAAATGTCCTTAGCTTTTGCTATCATTTTATTGATGTA
ATCTGTGAATGAGTCACTACTTATCCACACTCCAAGATCTTTGACAGAGT
TTTTGTTTTCAATTACAGTTTTGTTGTTAGTGAAATAGGTTGATAAACTT
TTTGATCTTTACCGTATTTCAAATGTTCGAATTTACAACTATTTAGTTTC
ATGTTATTGTTCTCAGTCAAATCGTAAACTATGTTGAGATCATGTTGCAA
CTTGAACGTGTCAATTATTCCTTGGATTTCTTTAAGCATTCTAGTGTCGT
CAGCAAAGCTTGCAAGGATTGAATACCTGATATTATCATCAATATCAGAA
ATCATCATCAGAAAAAAAATTGGCCTAAGTACTGTTCCTTGAGGTACTCC
TTTTCAAAGGTTATGATTTTCATTATGTGCGAGGTTAGTGACACTGGCCG
ATAATTTTGACCTTTGTAAATAGGAATGATATGACTGTCTTTGAAGAGAT
GTGGTGTTACCCCATTATCAAAACACTCTCTCCAGATTGTACAGAAAGGA
GTTGCTAGTTCTTGGCTACAATTTTTGAGAGAGATAGCAGAAAAACTACC
GGGTCCTGGTGCTGCATTTTTGGATATTGTTCCAATCTCCTCAACAAAGT
CCTCTTTCGTAAAATCATATCAGTCAAAACAAAATCACTGTCTTTATCAT
TATATTTTGCGTTTTCGAGTGGTGTACTGAAGACTGATTGGTACTGTTTA
TGAAGAATGTCTGCCATTTTTCTACTGTCAGACGCATAATTGTTTGTTGT
TTTATCTATTAAAGGACCAATTCTAGCTTTTGTCTTACTACTGTGTCTTT
TAGCATAAGAAAAGAAATATTTTCGATTTAGTTTGATCGCTTCACAAGCT
TTCTTTTCTGCAGTTGTAGTACTCTTCCTGTATGAGGTTTGTACAGTAAT
TGTCTTTCAATATCAACAAGTTGGGTTTAGATTATTTTAATCTGAAAACA
GTTTCTTGCTGAGATGATTCTTTTTTCTAACTTAGAACGCCTCCTCATTA
GAATTCTCCTTTCTCTCGGAATTCTTTTAAATTTTTGTTCGTTTTGTAAG
GTTTCCTAATTGGAACAAAGTTTTCTACGATTTTTTCGCATTTTCAATAG
TTTTTCTAATTTTTCTACATATTTTAATTTATAAAACTCATTGTCCCAGT
CAATTTGAGACAGTTAATATTTTACAGATTCCCAGGCAATTTCTTTGTGA
TAGAAACTGAATTTTTCAAATTAGTTACTTGGAATTCTGTTGTTTGTTTC
AGTTACTGTTTCTATAGTTTTATGAATGTTAATATTTACAGATGAATGGT
GCGTTATGTTTGGGTTCGTTGGCATGTATGAGTAGTTATGTATGTACTAA
TTCACGGTTGTTTGTCCATACTAAGTCAAGTATATTGCCATCTTTGTGTG
TTTCCTTAAAGGATACACTGTTGTAACGTAAATTCATTTGAAAGTTCGCT
TAACAGATATAAACATTGCTTCTCATCACTAGAAGCTCCTTTTGTAGAAC
TCCCACAAGGCCAGGATGCATGTGGAAGGTTGAAATCTCCTAGCAAGAAT
ATGTCTTGTAAGGTATTTTCCGCAAAAGTATTGAAAGTATCTCTCATCTT
TTTTAATATTTCAGAAAATTCTTTCGAGCTTGATGGATGGCTGTGAGATG
AGTCATCTGGTTGTCGATAAATAACAGATATCAATATGTTTAATTTCTTG
GAGTGAACAATTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCTTT
TACCTATAACTTTTGAAGGAATTCCTCAATCTTTATAAATTTGGTATCAT
TGGAAAGATATTAGTGAGTGGAACAATTTGAAATAAAAAAGTCTTTAAAA
AAATTCTAAAAACGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTG
TAGAAAAGTGCTATTACTTTCATTTTCACTGGAGAGATTCTGTGATCTTA
GGAGATCATCACTGTGAAGAAATTTCATTAAAATATTTATTCAATATAAA
GTTATGATACAAAGTTAATATGTGATTGACCCCAAAAAACAGCAAAAAAC
TGCAGAAAACAGCGTTTTTAGACGTCAATCAGCTTATAACTTTGTTTGAT
ATCTTTTGACTCAATGATTATTTTTGAGAATTTTTTTCACAGTGATGACG
TTCGATAATCAAGGTTTCACTTCAGTAAAAATGATAGTTATAGCACTTTT
CTACAAGATCTGCATTTTTTTCTTCTTCATTTTCATCTTCGTTTTTATAA
TCTTTTTAAAGTTTTTTTTATTTCAAATTGTTCCACTCACTAATATCTTT
CCAATGATACCAAATTTATACAGATTGAAGAATTCCTTCAAAAGTTATAG
GTAAATGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGCAGTTCA
TAATCACACCGTTTGAATACTGCAACACTGGTTTAAAGGTTGAAATTATG
TCGTTTCTAACGTAAAGTGCTACTCCTCCACTGTGCCGACCATATTTCTT
TTTGGTTTGTGATCTATCAGCTCTAATAATGAAGTAGTCGTTAATTTCAA
CTTCTGCATCTTTGTGATCAGCAAGCCACGTCTCAGTTAGAGCGATGAAA
AGTGAATTTTTCTCATGTAAAATATCACTTATAAATGGAACAGATGATTG
GACAGTTAATGGTTTTAGTGCTTGAATGTTGAGTAGCGTGAATGATTCTA
AGCTTGCATCATATGCTGGTTGTGCATGTGGTGTTGAAAGATTGTTTGAG
TTGACCATTGGTTGAAATTTGGGACTTGATTCCACTTGGTGGTGGTTGAG
GTTGATTTTTGTTCATCTCTGCAAACTTTTTGTCCATTATTGTCTGCAGA
ATCTTGTTTTTCAGATTTTGGATGAGTATTAGAAAATCCCTCTCCTTATC
ACTGGCATCAGGAATTTCGCCAGGGTCTGTCAAATGTATATCTTTCCTGT
ATTTTAACGAATTCTCAGTTAGTGTTCCCTTGACATGTAAAAATTTGCAT
TACATCCCTTTGGTTTTTTATTTCCATGTCTCAAAAGTTTTTTGTAAGCT
TGGGGGTGCTTGTACTGACATTTTTTACCTTTTATACCAAACTGACAGTT
CCCTCTCAAATAATATTTGCACATTATATCCTTCTTCTCTATTGGATGCT
CAGTACCAATATTTAAATGTTGTTCGGCTTCTCTGGCATTTTCGAGTTTA
TTACTTTGAGCATTTAGTGAAATTTGAGCTACTGCTTTTGAGAAGTTCTT
GTCGATAACATTAAGTTCACAACTCTGGCAGATATAGTGGAAGCTTGGTA
TCGATTTAAAGAATAGCTTGGGCAAACCTTTGTCGTCAAGTAATTTAAAT
TCTGAAAGGATTTTGCTATAGCATTCACGATGAACTTCTTGTCCACAACT
TTCACAGCAAAGGAATAGTTGACTTCCATGTTTGAATCTATATTGTTCAT
CGCATATCTGACATATATCAGGAAAGAATCATTTTACTTTAACAATAAGC
ATGTCGATTGCATCATCTTTCAAGACTTTTTCAGTTATTTCCTAGTTTGG
ACCCAAATAAATCAAAGTGACTGGTTTTGAGTTTGATAATTAGAGCTTCA
ACTTTTCTTATAAAAAAATTTTGTTATTATTTCTATTTCTCTTTCTTTTT
CCTTTTTCTTTTTCTTATGAGTGCTAAGGAACCATGCTTTTTTCCTCTAC
ATTATACCTTAGGCATGAGGTAGCAGAAACATTAACAGCTGAATGGTAGC
ATAACTAAAAAGAAATGTAGTAGTAAAACTGAAAAATATTCAAGTCTTAC
CATCGCCATTTTCAGAGTTTTAGCTCTAGTTTAGACTGGTTTAGACGGCC
CAATTTTTGTCCTGCCTATTCTAATTGTGAATTAAAGAGGGCATAAAGTG
GGCTGTCTAAAGTCGATGCATAGCCCTCTTTTGACGTCAATGCAGGTCAA
TGCAATGTCTTCTTTCAAACCTTTCCAAGCAAAGATTTTAACAACCAACT
TTGTGCCCTCTTTCTGCCTACTCTAACAATTAGAATAGGCAGGGCAGAAA
GTCGGCCGTCTAAACTAGAGCTAATTCACATTTCAATTTTATTGTCTCTC
TTGTTCTGAGGATTTTTTGTGTTGTATCTCATCTCATAATATATAGGTGT
TAATATATAACAAGTTTTTATTGGTTAAAATGAATTCTTAAGGTTAATGC
ATTTTTTTATAGGTGGTATGGTGGTGGGCGTGTATCTTTTGTTTTTCAAT
TTCAATTGATCTCATTGGCTTACGTTATTTCAATATATCCAGATATATCA
CGTGATAGTTTCTTTTTATTTTGGTTGCTTGGGATGTTATTGTTTTATTT
GGGCTGTAGTTTAATGTGGGCTCATGAGTCTTGCTATTTTAAAGATTTCT
TTTCGTAAAGTTGGGATTTTGCTTGAAAAAATTTCATTTCCATCATAGAC
ACATCCTAGGCCCAAATGCTTTTGATTTCCTCTGGAACATTTTTGGTATT
TGCAGAATAATATCACTGCAGAAAGAATTCAGGTCGAAATTTAATCTCAT
TTGATAGAAGCTTGCCTTTTTCTAGCTAAAGAGAGATTTTTGAAGACTTT
ACATTACAAATTTTTGAAAAATGGTAAAATTTATTTAGCTTAAAAATTAA
TACTTCAATCTCTGAAAACTTCAAACAGTTTATTAGTTCGAAAGTCATGG
ACTTGAAAATAGACCTTCAAAAGCATTTTGTTGCCTGAAATTGGCTTTAA
ATGGTTTATTTAGAGCTCAAATGGATACAATTTTCAACCATTAACTTTGT
TTTTTCTTTATATAGCTTGTAAAATTTAGTACAACAAGTGAAAAAATAAG
ATTTGGAATTATTTACAAGCCTGAAAAGGCCTAACATGCTATTTTTCCTA
ACATTTACCTTCAGTGTAAATCAGGATCTAATTTACAGAGAAAAAAAATT
CTTTTACAATTAAGCTTGTATCCGCACCTTTATTAGGGGATTTAAGACTA
CATAAGGGAATAATATTTAAATCAACTTTTAATTGATATGCAGGTTCCAA
ATGGTGTATCAGGGCTATCTACCAATTATATTGCTCAAAACATCATCGAA
AAGCTGAAAACATCTGCAAGAGGAAATCAACCATGTTGTCATGACTGTGC
TAATGGAATACCTGCCACAAACCATTGCAAAAATTGTGTTCTCAATTTAT
GTAAAGATTGTACAAATTATCATCAAAGATGTGTTCGCTTTGTTGGCCAT
TGTATTGTCGCAGTTTCGTCCGTCTCACAGGAATCTGTCAACCAAGTTCG
ATACTGCGCCAAACATAAAGAGCTACTCAAATATTTTTGTGAGAATTGTA
AGGTGGTTGTTTGTAATGACTGCATGATTAGCAATCAACATAAACAACAT
TCCATGTCACTTATCACCGAGGCTAAAGAGAAAGCAAAAAAAGAATTGAA
ACAAAAGCTGTTAAAAGGCCTGGAATGTAAACAAAATTTGCTCAATACTC
ACAAAGAAGGTGAAAATTTTAAAAAAAGAGTTGAGGCTGCCGAAGATAAA
TCTGTCTTGTTGGTCAAGAAGGTTTTTGTCGAAATTAGAAAAGAAGTAGC
TAAGAGAGAAAAGCAATTGGTTGACCAAATTAAAAAGGAGAGTAATTTCC
AATCATTTGATAAATTCTCAACGGCCTTAAAGAAGATATCGGATTCTTTA
GAATATGTGAAAGAAGTGATGAAAAATGACAACTATGACAACATGGAGAT
TATCATGGATTTATCGAATCATTTGGACTTGCTGGATAAAGAATTTGATT
TCAATAAAAAATATCATTCTTACGAAAATCCCAACCAGCATCATCATCAA
AACCAAATGCATGGAGGTCTATATTACAGTCAGCATCAACACCAGCAACA
CCAACCGTTACTTATCAAACCACAGCAAAACAAAGTTTTTATCTGTGAGC
AAAAAGGGAATATACATCATCAAAGTTATCATCAGGCGACAAGCACTAAT
AATTTATCATTCCAAATGACTTTGGTTGAACGTGATTTGGCTCCAAATCG
TAATCATAAAATAACCCAAAATTTAAACGAGTTTCAGATTTGAATAATAT
TTGATTACCTTAAAGGAAGAATAAGCAGTTTCACCCAAAATCTGTCAAAT
CAAGTTTCCCCCAGGATTTGTTTCTTCCACCATCCACCATCATTTCAACA
TTCCCTAAACATAGCTGTTCTAGTTTCAAAAAAGGATCCCCCAAACAAAA
TATCACCAAATTTAATTCCCTTTAAAAAAGACTTTTGTCAGCCACCAAAT
CACATTATTAACCCGGGGGGGGGGGGG Coding sequence (CDS) from alignment at sc0000676:131944..143720- >TCONS_00028402 ID=TCONS_00028402|Name=TCONS_00028402|organism=Clytia hemisphaerica|type=CDS|length=2466bp|location=Sequence derived from alignment at sc0000676:131944..143720- (Clytia hemisphaerica)
GTTCCAAATGGTGTATCAGGGCTATCTACCAATTATATTGCTCAAAACAT
CATCGAAAAGCTGAAAACATCTGCAAGAGGAAATCAACCATGTTGTCATG
ACTGTGCTAATGGAATACCTGCCACAAACCATTGCAAAAATTGTGTTCTC
AATTTATGTAAAGATTGTACAAATTATCATCAAAGATGTGTTCGCTTTGT
TGGCCATTGTATTGTCGCAGTTTCGTCCGTCTCACAGGAATCTGTCAACC
AAGTTCGATACTGCGCCAAACATAAAGAGCTACTCAAATATTTTTGTGAG
AATTGTAAGGTGGTTGTTTGTAATGACTGCATGATTAGCAATCAACATAA
ACAACATTCCATGTCACTTATCACCGAGGCTAAAGAGAAAGCAAAAAAAG
AATTGAAACAAAAGCTGTTAAAAGGCCTGGAATGTAAACAAAATTTGCTC
AATACTCACAAAGAAGGTGAAAATTTTAAAAAAAGAGTTGAGGCTGCCGA
AGATAAATCTGTCTTGTTGGTCAAGAAGGTTTTTGTCGAAATTAGAAAAG
AAGTAGCTAAGAGAGAAAAGCAATTGGTTGACCAAATTAAAAAGGAGAGT
AATTTCCAATCATTTGATAAATTCTCAACGGCCTTAAAGAAGATATCGGA
TTCTTTAGAATATGTGAAAGAAGTGATGAAAAATGACAACTATGACAACA
TGGAGATTATCATGGATTTATCGAATCATTTGGACTTGCTGGATAAAGAA
TTTGATTTCAATAAAAAATATCATTCTTACGAAAATCCCAACCAGCATCA
TCATCAAAACCAAATGCATGGAGGTCTATATTACAGTCAGCATCAACACC
AGCAACACCAACCGTTACTTATCAAACCACAGCAAAACAAAGTTTTTATC
TGTGAGCAAAAAGGGAATATACATCATCAAAGTTATCATCAGGCGACAAG
CACTAATAATTTATCATTCCAAATGACTTTGGTTGAACGTGATTTGGCTC
CAAATCGTAATCATAAAATAACCCAAAATTTAAACGAGTTTCAGATTTGA
ATGGCTCAGCAAAATACCGCTTATGATGAAAAGGTTCGTCAGGAGCTCGA
GTGCTCGATTTGCATAGATCAATACCAGAAACCTAAACTTTTGGGTTGTA
TGCACACGTTTTGTGAACCTTGTATAACGAGGCTGATTAAAAATGGAACA
ATATCTTGTCCTCAATGCAGACAAGTTTCAAAGGTTCCAAATGGTGTATC
AGGGCTATCTACCAATTATATTGCTCAAAACATCATCGAAAAGCTGAAAA
CATCTGCAAGAGGAAATCAACCATGTTGTCATGACTGTGCTAATGGAATA
CCTGCCACAAACCATTGCAAAAATTGTGTTCTCAATTTATGTAAAGATTG
TACAAATTATCATCAAAGATGTGTTCGCTTTGTTGGCCATTGTATTGTCG
CAGTTTCGTCCGTCTCACAGGAATCTGTCAACCAAGTTCGATACTGCGCC
AAACATAAAGAGCTACTCAAATATTTTTGTGAGAATTGTAAGGTGGTTGT
TTGTAATGACTGCATGATTAGCAATCAACATAAACAACATTCCATGTCAC
TTATCACCGAGGCTAAAGAGAAAGCAAAAAAAGAATTGAAACAAAAGCTG
TTAAAAGGCCTGGAATGTAAACAAAATTTGCTCAATACTCACAAAGAAGG
TGAAAATTTTAAAAAAAGAGTTGAGGCTGCCGAAGATAAATCTGTCTTGT
TGGTCAAGAAGGTTTTTGTCGAAATTAGAAAAGAAGTAGCTAAGAGAGAA
AAGCAATTGGTTGACCAAATTAAAAAGGAGAGTAATTTCCAATCATTTGA
TAAATTCTCAACGGCCTTAAAGAAGATATCGGATTCTTTAGAATATGTGA
AAGAAGTGATGAAAAATGACAACTATGACAACATGGAGATTATCATGGAT
TTATCGAATCATTTGGACTTGCTGGATAAAGAATTTGATTTCAATAAAAA
ATATCATTCTTACGAAAATCCCAACCAGCATCATCATCAAAACCAAATGC
ATGGAGGTCTATATTACAGTCAGCATCAACACCAGCAACACCAACCGTTA
CTTATCAAACCACAGCAAAACAAAGTTTTTATCTGTGAGCAAAAAGGGAA
TATACATCATCAAAGTTATCATCAGGCGACAAGCACTAATAATTTATCAT
TCCAAATGACTTTGGTTGAACGTGATTTGGCTCCAAATCGTAATCATAAA
ATAACCCAAAATTTAAACGAGTTTCAGATTTGAATGGCTCAGCAAAATAC
CGCTTATGATGAAAAGGTTCGTCAGGAGCTCGAGTGCTCGATTTGCATAG
ATCAATACCAGAAACCTAAACTTTTGGGTTGTATGCACACGTTTTGTGAA
CCTTGTATAACGAGGCTGATTAAAAATGGAACAATATCTTGTCCTCAATG
CAGACAAGTTTCAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028402-exon-sc0000676-1575043694:141647..143720 | TCONS_00028402-exon-sc0000676-1575043694:141647..143720 | Clytia hemisphaerica | exon |
| TCONS_00028402-exon-sc0000676-1575043694:131944..133227 | TCONS_00028402-exon-sc0000676-1575043694:131944..133227 | Clytia hemisphaerica | exon |
| TCONS_00028402-exon-sc0000676-1510915933:141647..143720 | TCONS_00028402-exon-sc0000676-1510915933:141647..143720 | Clytia hemisphaerica | exon |
| TCONS_00028402-exon-sc0000676-1510915933:131944..133227 | TCONS_00028402-exon-sc0000676-1510915933:131944..133227 | Clytia hemisphaerica | exon |
| TCONS_00028402-exon-sc0000676-1491911889:141647..143720 | TCONS_00028402-exon-sc0000676-1491911889:141647..143720 | Clytia hemisphaerica | exon |
| TCONS_00028402-exon-sc0000676-1491911889:131944..133227 | TCONS_00028402-exon-sc0000676-1491911889:131944..133227 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000676 | supercontig | sc0000676:131944..143720 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0046872 | metal ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005622 |
intracellular |
| molecular_function |
GO:0046872 |
metal ion binding |
| molecular_function |
GO:0008270 |
zinc ion binding |
Blast
BLAST of TCONS_00028402 vs. Swiss-Prot (Human)
Match: DYL2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens GN=DYNLL2 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 5.103e-52 Identity = 80/89 (89.89%), Postives = 88/89 (98.88%), Query Frame = -2
Query: 793 MSERKAIVKNADMSEEMQQDAIECTTQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYMGQVAILLFKSG 1059
MS+RKA++KNADMSE+MQQDA++C TQAMEK+NIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFY+GQVAILLFKSG
Sbjct: 1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
The following BLAST results are available for this feature:
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