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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028726 ID=TCONS_00028726|Name=TCONS_00028726|organism=Clytia hemisphaerica|type=transcript|length=1963bp
TATAAACATAGAAAACAAGGTTGTTTGAGTTACTTActttaatttctcaa
aaaccttATTTCATTACAGCAAAATTACTGAATTATCAACTATATAACCA
CCGAACATAATGCAAGTGACTGTAACATGTACAACAAATGATTCCATGGT
TTTACTGGATGTGTCACCAGACATTGAACTAGAGAACTTCAAAGTCTTGG
TGCAAGTTGAAAGTGGTGTAGACAGTATGATAAATATGGTTTTTTTCCAT
AATGGGCGTATTTTAATGGATGATAAAAAGACTTTGGGTGACTATGGTGT
TGTCAATCATGATGTTTTGTTGTTCGGCCCAAGACCGCAGGGTTCTATGG
GAAATCCACCATCCAGGGCACAACCAGTTTCAAGACCACAAGCAACATCA
GGGACTGGAGCAAGTGGTATCAATTGGGGAGCTATTAAGATTCCAACTCC
TGGATCTTCAACCCAGCAGCAGACAGCCTCTCCACAAGCTCGACAACaac
aacaacaacaacaacaacagcaacaaaaaAATACTGGTGGACAAGAAAGT
CCTGAAAACATTCGACAACTATTGTTAGCAGACCCTCATCAATTGTCACT
TCTTAAAGAACGAAACCCACGTTTAGCTGACGCCATCAATAATCCAGAGG
AATTCGCTAAGATGATCGAACAACAACGACGTGAACGCTTGGAGCAAGAG
CGCGCTCGAATACGTCTACTGACGGCCGATCCGTTCGATCAGGAAGCACA
ACGAATGATAGCTGAAGAAATTCGTATGGaaaatgtcaatcaaaacaTGG
AGACGGCTATGGAACACAATCCAGAAGCATTCGCTGAGGTGTATATGTTA
TACATTAACTGCAAAGTGAACGGACATCCGGTGAAGGCTTTCGTTGATTC
TGGAGCACAGATGACCATCATGAGCAAAGCGTGTGCTGAAAGATGTAACG
TTATGCGATTGGTGGATTTCCGTTGGCAAGGGACAGCTGTAGGAGTTGGA
CAACAGAAGATTATAGGGCGTATACACATGGGTGATATGGAGATAGGCAA
CATGCATTTACCGACTTCCTTCACTATCTTAGAGAATCAACCTATGGATA
TGTTACTGGGGCTTGACATGTTAAAACGACATCAGTGTTGTAtcgattta
aagaaaaattcactCATCTTTGGGACGAATAACGTTGAAACACCGTTCTT
GAACGAAGCAGAACTACCTGAGTGCGCTCGATTAAACCGGAAACGAACAT
TAGCATCTACGGAACAAGGGAGTTCCGGTGGTGGTGGTACTTCTTCTCTA
CAAGATGAGGAAGATAGACAATTAGCGGAAGCCTTAGCGAAATCACAAGC
GGAATCGGGTGGTGGTAGTTGATTTAATGTGATTTAATCATGATCTTTTT
AAGTTGTTTGTAGATAATATTTAATTTGTGGTCAAGTGCGATTAAACGGA
CCTGACTCAATGATGGGTATAAAGAGGATTGAGGTAATATTTTATTGCCC
TTTAAAGAACGATGAAGAtctattttcaaatccactttacACCATTATTG
AGCAAGGGGACTTGATCCTTAGATTGTTCTAGTTACTCGTCTACcagttt
taaaaattgtttcaaaGTTGGTTCCCTACTCTACTGGTTGACCTTATTTT
TTGCGGACGAATATCGCCCGCATAAAGAGATAATTTAACCTATTCTATAC
TTGTCCTAGGAGATGATTACTGTAAACTATACTAAGATGCTGTTCATTAA
AACATAACACCGTAGTTTATTAGAAGGAAGTCAACCAAtgcaagaaaaaa
catttaactCCTGACGCTGTTCTTAAATTTAGTCTTGACCTCTTCTACTT
TTTAAAGTTGATACAATTTGCTCTGTCCTAGCACTTTCTTAATTTTTGcc
ttcaatattttcaaatttatagtTTATATTCAAATTGTAGTTTTTACAGT
TTTCCAATTCTTG Run BLAST on NCBI protein sequence of TCONS_00028726-protein >TCONS_00028726-protein ID=TCONS_00028726-protein|Name=TCONS_00028726-protein|organism=Clytia hemisphaerica|type=polypeptide|length=420bp
MQVTVTCTTNDSMVLLDVSPDIELENFKVLVQVESGVDSMINMVFFHNGR
ILMDDKKTLGDYGVVNHDVLLFGPRPQGSMGNPPSRAQPVSRPQATSGTG
ASGINWGAIKIPTPGSSTQQQTASPQARQQQQQQQQQQQKNTGGQESPEN
IRQLLLADPHQLSLLKERNPRLADAINNPEEFAKMIEQQRRERLEQERAR
IRLLTADPFDQEAQRMIAEEIRMENVNQNMETAMEHNPEAFAEVYMLYIN
CKVNGHPVKAFVDSGAQMTIMSKACAERCNVMRLVDFRWQGTAVGVGQQK
IIGRIHMGDMEIGNMHLPTSFTILENQPMDMLLGLDMLKRHQCCIDLKKN
SLIFGTNNVETPFLNEAELPECARLNRKRTLASTEQGSSGGGGTSSLQDE
EDRQLAEALAKSQAESGGGS Run BLAST on NCBI transcript from alignment at sc0000700:97752..102190- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028726 ID=TCONS_00028726|Name=TCONS_00028726|organism=Clytia hemisphaerica|type=transcript|length=4439bp|location=Sequence derived from alignment at sc0000700:97752..102190- (Clytia hemisphaerica)
TATAAACATAGAAAACAAGGTTGTTTGAGTTACTTACTTTAATTTCTCAA
AAACCTTATTTCATTACAGCAAAATTACTGAATTATCAACTATATAACCA
CCGAACATAATGCAAGTGACTGTAACATGTACAACAAATGATTCCATGGT
TTTACTGGATGTGTCACCAGACATTGAACTAGAGAACTTCAAAGTCTTGG
TGCAAGTTGAAAGTGGTGTAGACAGTATGATAAATATGGTTTTTTTCCAT
AATGGGCGTATTTTAATGGATGATAAAAAGACTTTGGGTGACTATGGTGT
TGTCAATCATGATGTTTTGTTGTTCGGCCCAAGACCGCAGGGTTCTATGG
GAAATCCACCATCCAGGGCACAACCAGTTTCAAGACCACAAGCAACATCA
GGGACTGGAGCAAGTATGGTTTTGCTTTTTTTTTTTTTTATTCAGAAAGA
TTATTGTGCTATCTTGATTCATGTCGAAATTGAAATTCTATTCATCGACA
TTATTTTTATTTTTTTAATTTTAAATTTTTTCTTTGTTGATGGAGAATAG
CCAAATAGCTAAATTGGCAGACAATGGTTTAGTGGTATTCGAGTCTCAAT
TTATATCACGCCTCTATGCTGTATATAATGTTCACTCTTATTTTTAAAGC
CTTTTGATTTTAAACCCCTCACTATTTACACTTGTCGTTGACCAAACATG
TCAGAGAGTTGCAGACACTTGGTTCATATCAATTTATTTCGTATCTCTAA
CCTTTTCCTTCCCAAAAAAAAAGAGATCTAAGTAGATTCTTTATTAGTTT
TTAATCAAACTCAAAGTTCATAATTGCATATCTGATTTATCTAATTCTCA
TTTATAAGGTGGTATCAATTGGGGAGCTATTAAGATTCCAACTCCTGGAT
CTTCAACCCAGCAGCAGACAGCCTCTCCACAAGCTCGACAACANATCAAT
TGGGGAGCTATTAAGATCCCAACTCCTGGGTCTTCAACCCAGCAGCAAAC
AGTCTCTCCACAAGCTCGACAACAACAACAACAACAACAACAACAGCAAC
AAAAAAATACTGGTGGACAAGAAAGTCCTGAAAACATTCGACAACTATTG
TTAGCAGACCCTCATCAATTGTCACTTCTTAAAGAACGAAACCCACGTTT
AGCTGACGCCATCAATAATCCAGAGGAATTCGCTAAGGTTAATTCAAGAA
TTTTACATTTGCAATTTAGTTTGTATACACCTTTTTCAAAAGAACCGGTA
AATTTAGGTCTAGGATTGGCTTTTTTTTCGAGGTTTGCAAATTGAAAAGG
ATGAAGTTTTGAATTGGTTTAGGCTTTTTAATGTAGCTTTCAGATGAGTT
TTTTTCGTTCTACAATAATTATGGATAATGTGCTTGGGCTTATTGGGCTT
AGCCCTCTTGTTACAATATTCCAAGAGTATATGCCTTCTTCAGAGACCTG
ATAGTAACTTCTTTTTTTCGTACAGTTTCGTATGATGCAAAAATTCTCAT
ATTTTTTCCTGTTAAATACTCACTAGATGATCGAACAACAACGACGTGAA
CGCTTGGAGCAAGAGCGCGCTCGAATACGTCTACTGACGGCCGATCCGTT
CGATCAGGAAGCACAACGAATGATAGCTGAAGAAATTCGTATGGAAAATG
TCAATCAAAACATGGAGACGGCTATGGAACACAATCCAGAAGCATTCGCT
GAGGTAAGCATATTAATGTGTATGGTGGAGAGAGGAGTTTGCATGTTTGT
TTGAAAGTACGTAAATTCATTATCACTCGATAGATTGTAGCCTAAATGTA
ACTTCATTGTTTTGTCCAAGGGGTCCAAGTAGATTGGTAAAACTTAAAAA
GGGCTCAAAACTCAAAAGTTGGGTTGACAGTAGCATTTTTAACACAACCA
TGGTATTTTTTACTGACCTAAACAAACTACCTTATTACACAAATATTACT
AGGTAAGTATTTAACGGCCTTGAAATTTGCACGATTTGAAATTAACACGA
ATTATACTGCTTTTTCAAGGAAACCACGTCTGGTTTTAATTTAAGGGATT
TTTATTAACGCGAAATTTTTCAATTCGTGTTAATAAAATGACTAGTAATA
TTCGTGTAATAAGGTATTACACGATTAATCTATCACGTTAAATTGTCCGT
CTTATTATTTTATGCGATTATTTGTAAACACCGTTTCAGGTGTACNACGT
TAAATCGTCCGTCTTATTATTTTATGCGATTATTTTTAAACACCGTTTCA
GGTGTATATGTTATACATTAACTGCAAAGTGAACGGACATCCGGTGAAGG
CTTTCGTTGATTCTGGAGCACAGATGACCATCATGAGCAAAGCGTGTGCT
GAAAGGTTAGTGATCATTTCTGATTTTGTACCAGCTTTTCTTTTACGAAG
CTCTTCTTAAATAATGAACCCCAACATATTTTATTTGTCTGTTTCGGCCT
CGAATACATAATTTACGTTAGTGATCGACATTTTGCTTTCTGGTTGAACG
AAAACCGACTTAAAATGAAGCGTTAACGACTTGAAATCGTTTGGTCTTTT
CCAATCCAAGATTTCAGATTGGTAGATGGTATGCCTCCGTTCGAATCACA
AGAAGTCAATTCGAATCAATATTGTATATTGTATTATATTAAGTTTTTCA
ATCCCGGCCAAACAAAATCTTTGATCGGAGGTTTTTTGAAATTGGTACAC
TAAATGGTACCACTACTCGTTGTGAGTGTAATAGCAACGACAGCGCTAGA
TCGACTTTCCTTAAAAAATTGTGATGTAGCGCCATTTGATGTTGGGCAAA
GTTTTAAAAATACAATCCCTTTTTTTTGCGGGTACCACTTTCAAAAAACT
CAGATCGAAGATGGTGGATGTAGCTTAGTCTTGGGTTTATAAAGGTCATT
GATACAACCGATCTCTCTGTAAACGGAATCAGTAAAGTTGAGATACAAAT
TAGTCTATTTTCGCATTGTCAATACTGGATCTTTGGTCAAAAATGACCCC
TAAATACCAACGATTTATTTCCATAAAGTGAAGATTTACCAAACATGGTT
GCAACTTATGTTTAAAATTTTGACATTGCTATTTTCAGATGTAACGTTAT
GCGATTGGTGGATTTCCGTTGGCAAGGGACAGCTGTAGGAGTTGGACAAC
AGAAGATTATAGGGCGTATACACATGGGTGATATGGAGATAGGCAACATG
CATTTACCGACTTCCTTCACTATCTTAGAGAATCAACCTATGGATATGTT
ACTGGGGCTTGACATGTTAAAACGACATCAGGTATATCATTTTCTGCTAC
GAACGCTTCAAAATAACTTTCCGAATTGACAGTTGATTGATAATCCTACC
AGAGAAAATCTTGAGAAAGAGCATCGGGTTATGCTTAAATGTTGGGTTCG
ATATCTTTGGCCAGCTGTCGAACTATTACCAAGGATTTTAAAAAAACCTG
ATGCATTTGTAAAAAGGTGCAGTTCGCGCTCACCTGACATTTCTATTTCA
TGGACTACAGAAGATCGATTGTAAATTTCAATTTATTCACGTAAGAACGA
TCTTGCCTTTTTGCAGGTTTTGTTTCCCTTGGTACTAATTTTCTCTTTTT
CTTCTTCCCAGTGTTGTATCGATTTAAAGAAAAATTCACTCATCTTTGGG
ACGAATAACGTTGAAACACCGTTCTTGAACGAAGCAGAACTACCTGAGTG
CGCTCGATTAAACCGGAAACGAACATTAGCATCTACGGAACAAGGGAGTT
CCGGTGGTGGTGGTACTTCTTCTCTACAAGATGAGGAAGATAGACAATTA
GCGGAAGCCTTAGCGAAATCACAAGCGGAATCGGGTGGTGGTAGTTGATT
TAATGTGATTTAATCATGATCTTTTTAAGTTGTTTGTAGATAATATTTAA
TTTGTGGTCAAGTGCGATTAAACGGACCTGACTCAATGATGGGTATAAAG
AGGATTGAGGTAATATTTTATTGCCCTTTAAAGAACGATGAAGATCTATT
TTCAAATCCACTTTACACCATTATTGAGCAAGGGGACTTGATCCTTAGAT
TGTTCTAGTTACTCGTCTACCAGTTTTAAAAATTGTTTCAAAGTTGGTTC
CCTACTCTACTGGTTGACCTTATTTTTTGCGGACGAATATCGCCCGCATA
AAGAGATAATTTAACCTATTCTATACTTGTCCTAGGAGATGATTACTGTA
AACTATACTAAGATGCTGTTCATTAAAACATAACACCGTAGTTTATTAGA
AGGAAGTCAACCAATGCAAGAAAAAACATTTAACTCCTGACGCTGTTCTT
AAATTTAGTCTTGACCTCTTCTACTTTTTAAAGTTGATACAATTTGCTCT
GTCCTAGCACTTTCTTAATTTTTGCCTTCAATATTTTCAAATTTATAGTT
TATATTCAAATTGTAGTTTTTACAGTTTTCCAATTCTTG Coding sequence (CDS) from alignment at sc0000700:97752..102190- >TCONS_00028726 ID=TCONS_00028726|Name=TCONS_00028726|organism=Clytia hemisphaerica|type=CDS|length=8841bp|location=Sequence derived from alignment at sc0000700:97752..102190- (Clytia hemisphaerica)
TGTTGTATCGATTTAAAGAAAAATTCACTCATCTTTGGGACGAATAACGT
TGAAACACCGTTCTTGAACGAAGCAGAACTACCTGAGTGCGCTCGATTAA
ACCGGAAACGAACATTAGCATCTACGGAACAAGGGAGTTCCGGTGGTGGT
GGTACTTCTTCTCTACAAGATGAGGAAGATAGACAATTAGCGGAAGCCTT
AGCGAAATCACAAGCGGAATCGGGTGGTGGTAGTTGAATGTAACGTTATG
CGATTGGTGGATTTCCGTTGGCAAGGGACAGCTGTAGGAGTTGGACAACA
GAAGATTATAGGGCGTATACACATGGGTGATATGGAGATAGGCAACATGC
ATTTACCGACTTCCTTCACTATCTTAGAGAATCAACCTATGGATATGTTA
CTGGGGCTTGACATGTTAAAACGACATCAGGTGTATATGTTATACATTAA
CTGCAAAGTGAACGGACATCCGGTGAAGGCTTTCGTTGATTCTGGAGCAC
AGATGACCATCATGAGCAAAGCGTGTGCTGAAAGATGATCGAACAACAAC
GACGTGAACGCTTGGAGCAAGAGCGCGCTCGAATACGTCTACTGACGGCC
GATCCGTTCGATCAGGAAGCACAACGAATGATAGCTGAAGAAATTCGTAT
GGAAAATGTCAATCAAAACATGGAGACGGCTATGGAACACAATCCAGAAG
CATTCGCTGAGAACAACAACAACAACAACAACAGCAACAAAAAAATACTG
GTGGACAAGAAAGTCCTGAAAACATTCGACAACTATTGTTAGCAGACCCT
CATCAATTGTCACTTCTTAAAGAACGAAACCCACGTTTAGCTGACGCCAT
CAATAATCCAGAGGAATTCGCTAAGGTGGTATCAATTGGGGAGCTATTAA
GATTCCAACTCCTGGATCTTCAACCCAGCAGCAGACAGCCTCTCCACAAG
CTCGACAACATGCAAGTGACTGTAACATGTACAACAAATGATTCCATGGT
TTTACTGGATGTGTCACCAGACATTGAACTAGAGAACTTCAAAGTCTTGG
TGCAAGTTGAAAGTGGTGTAGACAGTATGATAAATATGGTTTTTTTCCAT
AATGGGCGTATTTTAATGGATGATAAAAAGACTTTGGGTGACTATGGTGT
TGTCAATCATGATGTTTTGTTGTTCGGCCCAAGACCGCAGGGTTCTATGG
GAAATCCACCATCCAGGGCACAACCAGTTTCAAGACCACAAGCAACATCA
GGGACTGGAGCAATGTTGTATCGATTTAAAGAAAAATTCACTCATCTTTG
GGACGAATAACGTTGAAACACCGTTCTTGAACGAAGCAGAACTACCTGAG
TGCGCTCGATTAAACCGGAAACGAACATTAGCATCTACGGAACAAGGGAG
TTCCGGTGGTGGTGGTACTTCTTCTCTACAAGATGAGGAAGATAGACAAT
TAGCGGAAGCCTTAGCGAAATCACAAGCGGAATCGGGTGGTGGTAGTTGA
ATGTAACGTTATGCGATTGGTGGATTTCCGTTGGCAAGGGACAGCTGTAG
GAGTTGGACAACAGAAGATTATAGGGCGTATACACATGGGTGATATGGAG
ATAGGCAACATGCATTTACCGACTTCCTTCACTATCTTAGAGAATCAACC
TATGGATATGTTACTGGGGCTTGACATGTTAAAACGACATCAGGTGTATA
TGTTATACATTAACTGCAAAGTGAACGGACATCCGGTGAAGGCTTTCGTT
GATTCTGGAGCACAGATGACCATCATGAGCAAAGCGTGTGCTGAAAGATG
ATCGAACAACAACGACGTGAACGCTTGGAGCAAGAGCGCGCTCGAATACG
TCTACTGACGGCCGATCCGTTCGATCAGGAAGCACAACGAATGATAGCTG
AAGAAATTCGTATGGAAAATGTCAATCAAAACATGGAGACGGCTATGGAA
CACAATCCAGAAGCATTCGCTGAGAACAACAACAACAACAACAACAGCAA
CAAAAAAATACTGGTGGACAAGAAAGTCCTGAAAACATTCGACAACTATT
GTTAGCAGACCCTCATCAATTGTCACTTCTTAAAGAACGAAACCCACGTT
TAGCTGACGCCATCAATAATCCAGAGGAATTCGCTAAGGTGGTATCAATT
GGGGAGCTATTAAGATTCCAACTCCTGGATCTTCAACCCAGCAGCAGACA
GCCTCTCCACAAGCTCGACAACATGCAAGTGACTGTAACATGTACAACAA
ATGATTCCATGGTTTTACTGGATGTGTCACCAGACATTGAACTAGAGAAC
TTCAAAGTCTTGGTGCAAGTTGAAAGTGGTGTAGACAGTATGATAAATAT
GGTTTTTTTCCATAATGGGCGTATTTTAATGGATGATAAAAAGACTTTGG
GTGACTATGGTGTTGTCAATCATGATGTTTTGTTGTTCGGCCCAAGACCG
CAGGGTTCTATGGGAAATCCACCATCCAGGGCACAACCAGTTTCAAGACC
ACAAGCAACATCAGGGACTGGAGCAATGTTGTATCGATTTAAAGAAAAAT
TCACTCATCTTTGGGACGAATAACGTTGAAACACCGTTCTTGAACGAAGC
AGAACTACCTGAGTGCGCTCGATTAAACCGGAAACGAACATTAGCATCTA
CGGAACAAGGGAGTTCCGGTGGTGGTGGTACTTCTTCTCTACAAGATGAG
GAAGATAGACAATTAGCGGAAGCCTTAGCGAAATCACAAGCGGAATCGGG
TGGTGGTAGTTGAATGTAACGTTATGCGATTGGTGGATTTCCGTTGGCAA
GGGACAGCTGTAGGAGTTGGACAACAGAAGATTATAGGGCGTATACACAT
GGGTGATATGGAGATAGGCAACATGCATTTACCGACTTCCTTCACTATCT
TAGAGAATCAACCTATGGATATGTTACTGGGGCTTGACATGTTAAAACGA
CATCAGGTGTATATGTTATACATTAACTGCAAAGTGAACGGACATCCGGT
GAAGGCTTTCGTTGATTCTGGAGCACAGATGACCATCATGAGCAAAGCGT
GTGCTGAAAGATGATCGAACAACAACGACGTGAACGCTTGGAGCAAGAGC
GCGCTCGAATACGTCTACTGACGGCCGATCCGTTCGATCAGGAAGCACAA
CGAATGATAGCTGAAGAAATTCGTATGGAAAATGTCAATCAAAACATGGA
GACGGCTATGGAACACAATCCAGAAGCATTCGCTGAGAACAACAACAACA
ACAACAACAGCAACAAAAAAATACTGGTGGACAAGAAAGTCCTGAAAACA
TTCGACAACTATTGTTAGCAGACCCTCATCAATTGTCACTTCTTAAAGAA
CGAAACCCACGTTTAGCTGACGCCATCAATAATCCAGAGGAATTCGCTAA
GGTGGTATCAATTGGGGAGCTATTAAGATTCCAACTCCTGGATCTTCAAC
CCAGCAGCAGACAGCCTCTCCACAAGCTCGACAACATGCAAGTGACTGTA
ACATGTACAACAAATGATTCCATGGTTTTACTGGATGTGTCACCAGACAT
TGAACTAGAGAACTTCAAAGTCTTGGTGCAAGTTGAAAGTGGTGTAGACA
GTATGATAAATATGGTTTTTTTCCATAATGGGCGTATTTTAATGGATGAT
AAAAAGACTTTGGGTGACTATGGTGTTGTCAATCATGATGTTTTGTTGTT
CGGCCCAAGACCGCAGGGTTCTATGGGAAATCCACCATCCAGGGCACAAC
CAGTTTCAAGACCACAAGCAACATCAGGGACTGGAGCAATGTTGTATCGA
TTTAAAGAAAAATTCACTCATCTTTGGGACGAATAACGTTGAAACACCGT
TCTTGAACGAAGCAGAACTACCTGAGTGCGCTCGATTAAACCGGAAACGA
ACATTAGCATCTACGGAACAAGGGAGTTCCGGTGGTGGTGGTACTTCTTC
TCTACAAGATGAGGAAGATAGACAATTAGCGGAAGCCTTAGCGAAATCAC
AAGCGGAATCGGGTGGTGGTAGTTGAATGTAACGTTATGCGATTGGTGGA
TTTCCGTTGGCAAGGGACAGCTGTAGGAGTTGGACAACAGAAGATTATAG
GGCGTATACACATGGGTGATATGGAGATAGGCAACATGCATTTACCGACT
TCCTTCACTATCTTAGAGAATCAACCTATGGATATGTTACTGGGGCTTGA
CATGTTAAAACGACATCAGGTGTATATGTTATACATTAACTGCAAAGTGA
ACGGACATCCGGTGAAGGCTTTCGTTGATTCTGGAGCACAGATGACCATC
ATGAGCAAAGCGTGTGCTGAAAGATGATCGAACAACAACGACGTGAACGC
TTGGAGCAAGAGCGCGCTCGAATACGTCTACTGACGGCCGATCCGTTCGA
TCAGGAAGCACAACGAATGATAGCTGAAGAAATTCGTATGGAAAATGTCA
ATCAAAACATGGAGACGGCTATGGAACACAATCCAGAAGCATTCGCTGAG
AACAACAACAACAACAACAACAGCAACAAAAAAATACTGGTGGACAAGAA
AGTCCTGAAAACATTCGACAACTATTGTTAGCAGACCCTCATCAATTGTC
ACTTCTTAAAGAACGAAACCCACGTTTAGCTGACGCCATCAATAATCCAG
AGGAATTCGCTAAGGTGGTATCAATTGGGGAGCTATTAAGATTCCAACTC
CTGGATCTTCAACCCAGCAGCAGACAGCCTCTCCACAAGCTCGACAACAT
GCAAGTGACTGTAACATGTACAACAAATGATTCCATGGTTTTACTGGATG
TGTCACCAGACATTGAACTAGAGAACTTCAAAGTCTTGGTGCAAGTTGAA
AGTGGTGTAGACAGTATGATAAATATGGTTTTTTTCCATAATGGGCGTAT
TTTAATGGATGATAAAAAGACTTTGGGTGACTATGGTGTTGTCAATCATG
ATGTTTTGTTGTTCGGCCCAAGACCGCAGGGTTCTATGGGAAATCCACCA
TCCAGGGCACAACCAGTTTCAAGACCACAAGCAACATCAGGGACTGGAGC
AATGTTGTATCGATTTAAAGAAAAATTCACTCATCTTTGGGACGAATAAC
GTTGAAACACCGTTCTTGAACGAAGCAGAACTACCTGAGTGCGCTCGATT
AAACCGGAAACGAACATTAGCATCTACGGAACAAGGGAGTTCCGGTGGTG
GTGGTACTTCTTCTCTACAAGATGAGGAAGATAGACAATTAGCGGAAGCC
TTAGCGAAATCACAAGCGGAATCGGGTGGTGGTAGTTGAATGTAACGTTA
TGCGATTGGTGGATTTCCGTTGGCAAGGGACAGCTGTAGGAGTTGGACAA
CAGAAGATTATAGGGCGTATACACATGGGTGATATGGAGATAGGCAACAT
GCATTTACCGACTTCCTTCACTATCTTAGAGAATCAACCTATGGATATGT
TACTGGGGCTTGACATGTTAAAACGACATCAGGTGTATATGTTATACATT
AACTGCAAAGTGAACGGACATCCGGTGAAGGCTTTCGTTGATTCTGGAGC
ACAGATGACCATCATGAGCAAAGCGTGTGCTGAAAGATGATCGAACAACA
ACGACGTGAACGCTTGGAGCAAGAGCGCGCTCGAATACGTCTACTGACGG
CCGATCCGTTCGATCAGGAAGCACAACGAATGATAGCTGAAGAAATTCGT
ATGGAAAATGTCAATCAAAACATGGAGACGGCTATGGAACACAATCCAGA
AGCATTCGCTGAGAACAACAACAACAACAACAACAGCAACAAAAAAATAC
TGGTGGACAAGAAAGTCCTGAAAACATTCGACAACTATTGTTAGCAGACC
CTCATCAATTGTCACTTCTTAAAGAACGAAACCCACGTTTAGCTGACGCC
ATCAATAATCCAGAGGAATTCGCTAAGGTGGTATCAATTGGGGAGCTATT
AAGATTCCAACTCCTGGATCTTCAACCCAGCAGCAGACAGCCTCTCCACA
AGCTCGACAACATGCAAGTGACTGTAACATGTACAACAAATGATTCCATG
GTTTTACTGGATGTGTCACCAGACATTGAACTAGAGAACTTCAAAGTCTT
GGTGCAAGTTGAAAGTGGTGTAGACAGTATGATAAATATGGTTTTTTTCC
ATAATGGGCGTATTTTAATGGATGATAAAAAGACTTTGGGTGACTATGGT
GTTGTCAATCATGATGTTTTGTTGTTCGGCCCAAGACCGCAGGGTTCTAT
GGGAAATCCACCATCCAGGGCACAACCAGTTTCAAGACCACAAGCAACAT
CAGGGACTGGAGCAATGTTGTATCGATTTAAAGAAAAATTCACTCATCTT
TGGGACGAATAACGTTGAAACACCGTTCTTGAACGAAGCAGAACTACCTG
AGTGCGCTCGATTAAACCGGAAACGAACATTAGCATCTACGGAACAAGGG
AGTTCCGGTGGTGGTGGTACTTCTTCTCTACAAGATGAGGAAGATAGACA
ATTAGCGGAAGCCTTAGCGAAATCACAAGCGGAATCGGGTGGTGGTAGTT
GAATGTAACGTTATGCGATTGGTGGATTTCCGTTGGCAAGGGACAGCTGT
AGGAGTTGGACAACAGAAGATTATAGGGCGTATACACATGGGTGATATGG
AGATAGGCAACATGCATTTACCGACTTCCTTCACTATCTTAGAGAATCAA
CCTATGGATATGTTACTGGGGCTTGACATGTTAAAACGACATCAGGTGTA
TATGTTATACATTAACTGCAAAGTGAACGGACATCCGGTGAAGGCTTTCG
TTGATTCTGGAGCACAGATGACCATCATGAGCAAAGCGTGTGCTGAAAGA
TGATCGAACAACAACGACGTGAACGCTTGGAGCAAGAGCGCGCTCGAATA
CGTCTACTGACGGCCGATCCGTTCGATCAGGAAGCACAACGAATGATAGC
TGAAGAAATTCGTATGGAAAATGTCAATCAAAACATGGAGACGGCTATGG
AACACAATCCAGAAGCATTCGCTGAGAACAACAACAACAACAACAACAGC
AACAAAAAAATACTGGTGGACAAGAAAGTCCTGAAAACATTCGACAACTA
TTGTTAGCAGACCCTCATCAATTGTCACTTCTTAAAGAACGAAACCCACG
TTTAGCTGACGCCATCAATAATCCAGAGGAATTCGCTAAGGTGGTATCAA
TTGGGGAGCTATTAAGATTCCAACTCCTGGATCTTCAACCCAGCAGCAGA
CAGCCTCTCCACAAGCTCGACAACATGCAAGTGACTGTAACATGTACAAC
AAATGATTCCATGGTTTTACTGGATGTGTCACCAGACATTGAACTAGAGA
ACTTCAAAGTCTTGGTGCAAGTTGAAAGTGGTGTAGACAGTATGATAAAT
ATGGTTTTTTTCCATAATGGGCGTATTTTAATGGATGATAAAAAGACTTT
GGGTGACTATGGTGTTGTCAATCATGATGTTTTGTTGTTCGGCCCAAGAC
CGCAGGGTTCTATGGGAAATCCACCATCCAGGGCACAACCAGTTTCAAGA
CCACAAGCAACATCAGGGACTGGAGCAATGTTGTATCGATTTAAAGAAAA
ATTCACTCATCTTTGGGACGAATAACGTTGAAACACCGTTCTTGAACGAA
GCAGAACTACCTGAGTGCGCTCGATTAAACCGGAAACGAACATTAGCATC
TACGGAACAAGGGAGTTCCGGTGGTGGTGGTACTTCTTCTCTACAAGATG
AGGAAGATAGACAATTAGCGGAAGCCTTAGCGAAATCACAAGCGGAATCG
GGTGGTGGTAGTTGAATGTAACGTTATGCGATTGGTGGATTTCCGTTGGC
AAGGGACAGCTGTAGGAGTTGGACAACAGAAGATTATAGGGCGTATACAC
ATGGGTGATATGGAGATAGGCAACATGCATTTACCGACTTCCTTCACTAT
CTTAGAGAATCAACCTATGGATATGTTACTGGGGCTTGACATGTTAAAAC
GACATCAGGTGTATATGTTATACATTAACTGCAAAGTGAACGGACATCCG
GTGAAGGCTTTCGTTGATTCTGGAGCACAGATGACCATCATGAGCAAAGC
GTGTGCTGAAAGATGATCGAACAACAACGACGTGAACGCTTGGAGCAAGA
GCGCGCTCGAATACGTCTACTGACGGCCGATCCGTTCGATCAGGAAGCAC
AACGAATGATAGCTGAAGAAATTCGTATGGAAAATGTCAATCAAAACATG
GAGACGGCTATGGAACACAATCCAGAAGCATTCGCTGAGAACAACAACAA
CAACAACAACAGCAACAAAAAAATACTGGTGGACAAGAAAGTCCTGAAAA
CATTCGACAACTATTGTTAGCAGACCCTCATCAATTGTCACTTCTTAAAG
AACGAAACCCACGTTTAGCTGACGCCATCAATAATCCAGAGGAATTCGCT
AAGGTGGTATCAATTGGGGAGCTATTAAGATTCCAACTCCTGGATCTTCA
ACCCAGCAGCAGACAGCCTCTCCACAAGCTCGACAACATGCAAGTGACTG
TAACATGTACAACAAATGATTCCATGGTTTTACTGGATGTGTCACCAGAC
ATTGAACTAGAGAACTTCAAAGTCTTGGTGCAAGTTGAAAGTGGTGTAGA
CAGTATGATAAATATGGTTTTTTTCCATAATGGGCGTATTTTAATGGATG
ATAAAAAGACTTTGGGTGACTATGGTGTTGTCAATCATGATGTTTTGTTG
TTCGGCCCAAGACCGCAGGGTTCTATGGGAAATCCACCATCCAGGGCACA
ACCAGTTTCAAGACCACAAGCAACATCAGGGACTGGAGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028726-exon-sc0000700-1575043694:101778..102190 | TCONS_00028726-exon-sc0000700-1575043694:101778..102190 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1575043694:101249..101332 | TCONS_00028726-exon-sc0000700-1575043694:101249..101332 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1575043694:101004..101167 | TCONS_00028726-exon-sc0000700-1575043694:101004..101167 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1575043694:100488..100664 | TCONS_00028726-exon-sc0000700-1575043694:100488..100664 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1575043694:99836..99939 | TCONS_00028726-exon-sc0000700-1575043694:99836..99939 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1575043694:98910..99102 | TCONS_00028726-exon-sc0000700-1575043694:98910..99102 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1575043694:97752..98579 | TCONS_00028726-exon-sc0000700-1575043694:97752..98579 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:101778..102190 | TCONS_00028726-exon-sc0000700-1510915933:101778..102190 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:101249..101332 | TCONS_00028726-exon-sc0000700-1510915933:101249..101332 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:101004..101167 | TCONS_00028726-exon-sc0000700-1510915933:101004..101167 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:100488..100664 | TCONS_00028726-exon-sc0000700-1510915933:100488..100664 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:99836..99939 | TCONS_00028726-exon-sc0000700-1510915933:99836..99939 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:98910..99102 | TCONS_00028726-exon-sc0000700-1510915933:98910..99102 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1510915933:97752..98579 | TCONS_00028726-exon-sc0000700-1510915933:97752..98579 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:101778..102190 | TCONS_00028726-exon-sc0000700-1491911889:101778..102190 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:101249..101332 | TCONS_00028726-exon-sc0000700-1491911889:101249..101332 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:101004..101167 | TCONS_00028726-exon-sc0000700-1491911889:101004..101167 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:100488..100664 | TCONS_00028726-exon-sc0000700-1491911889:100488..100664 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:99836..99939 | TCONS_00028726-exon-sc0000700-1491911889:99836..99939 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:98910..99102 | TCONS_00028726-exon-sc0000700-1491911889:98910..99102 | Clytia hemisphaerica | exon |
| TCONS_00028726-exon-sc0000700-1491911889:97752..98579 | TCONS_00028726-exon-sc0000700-1491911889:97752..98579 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000700 | supercontig | sc0000700:97752..102190 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004190 | aspartic-type endopeptidase activity |
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0004190 |
aspartic-type endopeptidase activity |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00028726 vs. Swiss-Prot (Human)
Match: DDI2 (Protein DDI1 homolog 2 OS=Homo sapiens GN=DDI2 PE=1 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.610e-101 Identity = 188/394 (47.72%), Postives = 244/394 (61.93%), Query Frame = 2
Query: 110 MQVTVTCTTND---SMVLLDVSPDIELENFKVLVQVESGVDSMINMVFFHNGRILMDDKKTLGDYGVVNHDVLLF------GPRPQGSMGNPP-----SRAQPVS---RPQATSGTGASGINWGAIKIXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNTGGQESPENIRQLLLADPHQLSLLKERNPRLADAI--NNPEEFAKMXXXXXXXXXXXXXXXXXXXTADPFDQEAQRMIAEEIRMENVNQNMETAMEHNPEAFAEVYMLYINCKVNGHPVKAFVDSGAQMTIMSKACAERCNVMRLVDFRWQGTAVGVGQQKIIGRIHMGDMEIGNMHLPTSFTILENQPMDMLLGLDMLKRHQCCIDLKKNSLIFGTNNVETPFLNEAELPECARL 1234
M +TV C D L V D EL NF+ L ++ESG+ + + + + R L D+ ++L YG+ + DV++ PRP N P S A P + R + GT S + G I + G ++P +R +LLA+PH+LSLLKERNP LA+A+ + E+F++++ +Q+++R +E+ RIRL +ADPFD EAQ I E+IR +N+ +NM AME PE+F +V MLYINCKVNGHPVKAFVDSGAQMTIMS+ACAERCN+MRLVD RW G A GVG QKIIGR+H+ ++I LP SF+ILE QPMDMLLGLDMLKRHQC IDLKKN L+ GT +T FL E ELPECARL
Sbjct: 1 MLLTVYCVRRDLSEVTFSLQVDADFELHNFRALCELESGIPAAESQIVYAE-RPLTDNHRSLASYGLKDGDVVILRQKENADPRPPVQFPNLPRIDFSSIAVPGTSSPRQRQPPGTQQSHSSPGEI-----------------------------TSSPQGLDNPALLRDMLLANPHELSLLKERNPPLAEALLSGDLEKFSRVLVEQQQDRARREQERIRLFSADPFDLEAQAKIEEDIRQQNIEENMTIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDSGAQMTIMSQACAERCNIMRLVDRRWAGIAKGVGTQKIIGRVHLAQVQIEGDFLPCSFSILEEQPMDMLLGLDMLKRHQCSIDLKKNVLVIGTTGSQTTFLPEGELPECARL 364
The following BLAST results are available for this feature:
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