TCONS_00053574 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053574
Unique Name	TCONS_00053574
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2620

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_233:729374..737861+

transcript sequence

>TCONS_00053574 ID=TCONS_00053574|Name=TCONS_00053574|organism=Clytia hemisphaerica|type=transcript|length=2620bp
aaaataaagttttgattacTCCAAGCAAACAGATTTGTTTGGCTATTAGA
TTTTCGACGAACGTATGAAATTATCGTCGTCAATTAATCAAGCTAATTGA
GCTAGCATTAACAAtctagacaaatgaaatttttaattgtttcgtttaAT
TCTGTAACCAGATGTTTATCATGCCATTTTAAAACTTGATAATGTAAGAA
TTGAAAACACCTGCGGGTAACTGCTGCCAATAAACTCGATGAATTACAGA
TAGACGCGTGCCAatgattagtttgattagttAAAAGAGAATCTTGTCGA
CCTATGGGGATCAAAACCATCATTCTGCCACTCAGATATGATCCACTGAC
ACATTAGCACTGCAGTCTTATGAAAGAGCATAGaacataagaacatttta
atacaTTTCGAGATGGGTAACCGAGTTTCAACGAGATATTCAACGAGATA
TCCTCATTTATACCGAGCGTATCTCAGAACGTTTGAAGGGAGCAACACAA
ATGGACCGGATGTATCGGTAGTAAGCGTGGATACGAAACGTGATCTCAAT
GGACGCTTGCATCACACCGATCAATTCAAAACAGATGCCATGGTGGTTCG
TCGTGGACAAGAATTCTTACTTGATGTCAAATTGTCGACCACCTTCGACC
CCTCACTTCACTCCATCTCGTTGGAATTACGAACAGGCTCCAGACCGAAC
ACCTACGAGCGAACGTTGGTCAAAATCCCCATGGTTAAATATTTGGACAA
AATAAAATGGGGAATGAGAATTGTTGGAAAATCGGACAGCACTCTGCAGT
TAAAGATCAACATTCCAGCCAGATGCTTGATAGCAAATTACGAGTTGAGG
ATCGTCAACAACTTGAGGAAGGTTCTGTACACACATAAACAGCCTGTGTA
TATCTTGTTCAACCCCTGGTCTACTGAAGACGAAGTTTACATGCCCAATG
CTTCCCATCTTGAAGAATACGTATTGAATGATCAAGGGGTGTTGTTTCAA
GGATCGGCCAACCATATTTCACCTTTGAGATGGTATTTTGGACAGTTTGA
GAAGATCAGCCTGGAGTCAGCTTTTGCTCTTCTATCAACGACAAAAATCC
GGGAGAGAGATACAGCTCGTGATATTTCCCGTCGCATTGCTGCTTTGGTT
AACTCGAACGACGAAAGGGGCGTTTTACAAGGGCGTTGGGGAAGTGATTT
TACAGGAGGAACCGAGCCATGGGCGTGGACTGGATCACCCGCCATTCTAG
AAGAATACACGAAGACTAAACAACCAGTCAAATACGGTCAATGCTGGAAT
TTCTGCGGATTGACTACAACACTATTGCGTGTTGTTGGTATTCCGACACG
TGCTATCAGTAACTTCAACTCTGCGCACGACACTGACGGTAATTGTACTT
ATGATCGCTTCTACGATCAAAATGGTGAATTCTTATCGCGGATGTCACGT
GACTCTACTTGGAACTTTCACTGTTGGAGCGATGCATGGATGGAGAGACC
AGACCTTCCTCCAGGGTACGGAGGATGGCAAGCAGTCGATGGCACGCCGC
AAGAACGAAGTAATGGACGTTATCAAACAGGACCAGCACCTTTGCGCGCC
ATCAAAGAAGGGAATGTCAAATTGAAACACGATGTACGTTTCTTGTTCGC
CGAAGTGAATGCTGATACAGTCTACTGGTCTAGATTGTCACCTGATCAGG
AGTTTCGACCAATCAGAGTTGACAGAAAATTGATAGGTCAAAACATTAGC
ACTAAAGCTATCGGTCGCGAACAGTACAGACGTGTTGATATCACTGAAGA
TTATAAATACCCAGAAGGCTCTGCTTTAGAACTCATCACATCCCAGCGAG
CATTGCATCTGACAAACAACAAGATTGTTAGCGATACAGTGGACGACCTT
AAGTACAGCCTGTATGCTCAAAATGAAGTGATGGTAGGGAAAGACGTGGT
GTTGAGGCTACACATCAAGAACACGGCAGTCAACAATCGAAATGTTCAGA
TAATGGTTGGTGGTCATGTTTTGACATATAATGGGATCGCTATCAAGAAG
CTACCCATGCGTAAGACACATGAAATGGTTCACAGACAAACAGATACTTA
CCACACGGTTTCCTTCGCTGCTTCACAATATCTCTCTTTGCTGAAACAAT
CACCTCGACTGCGTTTCCATGTCTTCTCAAGTTGTTCTGAGACAAGTCAG
ATCTACGTGACCGAAACTATCGTGACGTTAGGAAGGCCAGAACTTGTATT
TGAACAGTTGCCAAGTTACTGGAAGAAAGGAGAGGAGTTGCGGTTCACAG
TTCGCGTTCAAAACCCACTTCGGCTGGAGTTGACTGATTGCGTTTTATGG
CTAGATGGAAACATAATGGAAAGCAGGCTGTCGCTACCCCAAAGGAATAT
ACCAGCTAATAGCTTCCACCAAGTGAATATTGCTTTGGTTCCACAGTACG
AAGGGAGAAAGAACATGATCGTGACCTTTTCTTCTAAACAACTTGGTGGC
TTTCGAGGTTCAAGCTTCATTGATATACGATCATAGAAGAGGTTTTACCG
ACGGTATTCTGGTTATGTTCCATCGATTACGCCACATTGTAAAGAGAAAG
TAATTTGTATTCGTTTCTTg

Run BLAST on NCBI

transcript from alignment at scaffold_233:729374..737861+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053574 ID=TCONS_00053574|Name=TCONS_00053574|organism=Clytia hemisphaerica|type=transcript|length=8488bp|location=Sequence derived from alignment at scaffold_233:729374..737861+ (Clytia hemisphaerica)
aaaataaagttttgattacTCCAAGCAAACAGATTTGTTTGGCTATTAGA
TTTTCGACGAACGTATGAAATTATCGTCGTCAATTAATCAAGCTAATTGA
GCTAGCATTAACAAtctagacaaatgaaatttttaattgtttcgtttaAT
TCTGTAACCAGATGTTTATCATGCCATTTTAAAACTTGATAATGTAAGAA
TTGAAAACACCTGCGGGTAACTGCTGCCAATAAACTCGATGAATTACAGA
TAGACGCGTGCCAatgattagtttgattagttAAAAGAGAATCTTGTCGA
CCTATGGGGATCAAAACCATCATTCTGCCACTCAGATATGATCCACTGAC
ACATTAGCACTGCAGTCTTATGAAAGAGCATAGaacataagaacatttta
atacaTTTCGAGATGGGTAACCGAGTTTCAACGAGATATTCAACGAGATA
TCCTCATTTATACCGAGCGTATCTCAGAACGTTTGAAGGGAGCAACACAA
ATGGACCGGGTAAGTGGATTGCCATCGTTTGCCATTTATAACAACACTTC
TTCACATatgaattttcaatatttcccATGTACAAGATGTAAATTTCTGC
TTGATCTAGCCAACAGAACTACGAGGCTAACTCTTCCTtgatctgaaaat
ttcaaaatcgcGATTTATAGAACTGTTAAAGTCATTAATTCTTACTTACC
CAATTCTTGTTGCAAGGATCTATTTAAATTATTGGGTTATTCATTAGCCA
TGTCGCTGTCCGTCGTGCTGTATGTCCATTTTTGAAGAAGCagcgctttg
tcaattcaatttcattttggaaaaaacggCGCTTTTTAACAATCAGTAAA
TTTAATCAATAATCAATTGCTATTTCGCTTGGCTTTCCTGCCGCTTCGAT
TTTTCATAGTTTTGttcaatctcgtacccagagcaccactttttgatttt
actgatgtaTGTGCGATTACAatcgtgagcgctatcagaattatcaaaaa
gcgaGCTAAAGGACTGGAATcgagtttgaatttttttgtctttgctTTTG
ACGATGGTATTAGTAGACCAGATTTGGTCAAATGTTTGCTATAATTAATT
TTCTGTGCTTGTCTCGTTTGGTTTACAGATGTATCGGTAGTAAGCGTGGA
TACGAAACGTGATCTCAATGGACGCTTGCATCACACCGATCAATTCAAAA
CAGATGCCATGGTGGTTCGTCGTGGACAAGAATTCTTACTTGATGTCAAA
TTGTCGACCACCTTCGACCCCTCACTTCACTCCATCTCGTTGGAATTACG
AACAGGCTCCAGACCGAACACCTACGAGCGAACGTTGGTCAAAATCCCCA
TGGTTAAATATTTGGACAAAATAAAATGGGGAATGAGAATTGTTGGAAAA
TCGGACAGCACTCTGCAGGTTTGTAAATTATTCTAAAAGTCAGCATATTT
ACTTATAAATTCTTCTCCTTATATAATCCGAACTTTGAAACTATTTTTTA
AacgggctcttccagaaagaaTTTGAATGTGGGGAAAGGAGGATATTTGG
ATATTTGGAaattaccccccggacattgtgacttttaaCCCTCGGACAGC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttaccccccccccccccgga
caagcatcagtcgaccccctggacattaaaaagtaccctcaaacagagca
aagtTACCCAAAAACAGAGAAAGTTTACCTTCCGGACAAGGccaattttg
tagatttttcactacccccggacactatatcttccacccccattccccat
gtacggacattttctggaagagcccaatgataATGTCGACTTTTAGTTGA
TTTGACTTCGTACATAAAATATTAGATCAAAAATGACAGCTTAGCTTTTG
ATTTATTCTCTACTTCAGTTAAAGATCAACATTCCAGCCAGATGCTTGAT
AGCAAATTACGAGTTGAGGATCGTCAACAACTTGAGGAAGGTTCTGTACA
CACATAAACAGCCTGTGTATATCTTGTTCAACCCCTGGTCTACTGGTAAT
ACATCCCTTTTTGCTTGTAATCGTGTCAGTCAAGGATGTGAGGGCTCCTT
CGAAGTTAATTCTATATTTTAAGATCTGTTATGGCAAAGATTTTCGTAGG
GAGGCGGGGGTGTCAAGTATTCTTATATTGAGAGGGGGATGTTGGGGAAA
ATCGACAAGTTAATAAATGCTATAGGACGGTTAATCGACACCTGTGAGAA
TTGATGATGTGAACTCTTGATTTGCAGAAGACGAAGTTTACATGCCCAAT
GCTTCCCATCTTGAAGAATACGTATTGAATGATCAAGGGGTGTTGTTTCA
AGGATCGGCCAACCATATTTCACCTTTGAGATGGTATTTTGGACAGGTAT
AGTGCTTTTGATGCTTCTTCTATGTGTGGTTTCGAAAAATATCTATTGGT
ATTAGGTGTTTCTATAGAATTCCCCATATACTTTAGAGATGTACGTTATA
TTTTGATACTTCAGAGCCTATTTATTGAttgtctttttattttgcaGTTT
GAGAAGATCAGCCTGGAGTCAGCTTTTGCTCTTCTATCAACGACAAAAAT
CCGGGAGAGAGATACAGCTCGTGATATTTCCCGTCGCATTGCTGCTTTGG
TCAGTCTTAATCTTTCAATAATCGATTATTTGATTTAATGCAGAAATATT
TGATGTCTAAGGcgtacatttttgttttctaagTTCTACTCTACGAATCA
TGCGAAGTGTACGCTGTTGTAGTTTTACACGATactcactgggcgaaata
agagatttccaattctggaaatatcttgaaaatatgatatttccatatac
atttgtaaatatatgacttttttatatttacaaaGTTTAGGAAGtatcat
atttcatgatatttccaggattaaaacatctaattttcaaaatattttca
aattttactgtttttaaATAGAATGTTTTTGCGTATTTTCTCTTCATATC
TAGGTTAACTCGAACGACGAAAGGGGCGTTTTACAAGGGCGTTGGGGAAG
TGATTTTACAGGAGGAACCGAGCCATGGGCGTGGACTGGATCACCCGCCA
TTCTAGAAGAATACACGAAGACTAAACAACCAGTCAAATACGGTCAATGC
TGGAATTTCTGCGGATTGACTACAACACGTACGTATTCAAGATTAAAGTA
ATGGgtatattttaattttcttgtTTCGTAATGTTTCTTGGGTGTAATCC
TCTTTGAGATTAACTTTCCATCAGATAAGGATAAGACTATCTGTTATTTA
TGCTAAACTTGTTGGTCGAAGCGGAAACGTAGAAGTGTTTTCATATGgtt
aaagcaaaaaatatttttaaagtttccaAATACAACCATCTCCTTCCCTG
GCCGAATATCTTTCTTTCTGGTTACAGTATTGCGTGTTGTTGGTATTCCG
ACACGTGCTATCAGTAACTTCAACTCTGCGCACGACACTGACGGTAATTG
TACTTATGATCGCTTCTACGATCAAAATGGTGAATTCTTATCGCGGATGT
CACGTGACTCTACTTGGTAAGCATATTTTCTCTTACTTTTTATCGAAAGG
GTTAATCAgataatttatgatttttaaccTTCGGGTTTCTTCTATAACTC
TAATACAACCATTTCTTGAAACAATTGATCTTACTGCGACTGAACATTTC
TTGCctgactacacgttttttttataagaacaaactatataagaacataa
gtttagaatattttaaggctttgtggactctaaaacacacaatttcttag
gaaaaaggACAAAATCACTCACAAAATGGtagaaataaaaacatgttaag
aacattctttggcttgaaactcaaaaagataagaacatccgaagacttaa
aaaaatttggatgctcttataaaaaaacgtgttgcTTTACAGCTTAATTA
TAGTAGGCTCATATGGCTATTTGAACTCAATAAGATAATTTCAATTACCT
CAATGAATTTTGACCCGAATTCGTTCAAATGGAAACTTCTAATAAATTTT
GAGCGTGTTCAATTCTAACAAACTAAGAATGGGTGGTTGTAGGAACTTTC
ACTGTTGGAGCGATGCATGGATGGAGAGACCAGACCTTCCTCCAGGGTAC
GGAGGATGGCAAGCAGTCGATGGCACGCCGCAAGAACGAAGTAATGGTAT
GTAGAGTTACGACAGAGAGAATTCCAATTAAGTTTAACTTTGccatattt
tatatttttatcaaattgggtttttccagaaaaacctttacccccactgt
taaggatattgattttttccCCCTGGATATCATTCTTTATTATTAAATAC
CCTCTGGATAtacactcttaaaaatatgctcaaccccctggatatcctct
cttataaagatgcttacccgtcgatatcgtattttttacttgaaaagaca
ctttactccctggatatccgctcccttgcagatatttaaccccctgaatA
TTCACTTTTGAACAAACATCGTTAACTCcttggatatccgatatccttaa
cagggggcacggactatttctgggaACGCCCATTGAAGTAAGCAGGTTTG
AACATGTAATACCAGAAGGAATCAAGGTTATATCCTCCTTATCTTCGAAC
TTAATAATTTTTCCATACTACAGACCTGTTTTGTAGATATGCTACAAtgt
cttttcttcttcttgtaTAGGACGTTATCAAACAGGACCAGCACCTTTGC
GCGCCATCAAAGAAGGGAATGTCAAATTGAAACACGATGTACGTTTCTTG
TTCGCCGAAGTGAATGCTGATACAGTCTACTGGTCTAGATTGTCACCTGA
TCAGGAGTTTCGACCAATCAGAGTTGACAGAAAATTGATAGGTAAGTTTT
AGATGTTTTACAAAATGAGTCTGCTTCTTATATCTAAAGattattggccc
agcgcgcAGTGGAATGGGCTTTTAAAACACTGGTCGAAAAGATTTGACTT
TGTTGGGGCCTATGAGCGCAAGTATCAATGAACGAGTCCAGGCTAAAAAT
TGATGATTATAATATGAAGCGCACGCATAAGAAAAAACCACATATTATTA
ATACCTCCGAGTGATATGGtcaaatctttttatttcaagcaatAAGAAAT
ACTTATCACcaaaaaattaaagtaattaatTCTTTATTGCTCGCCCGACT
CGAGTTGTTCCATATATAGAAAGAATTCCCTCCTGTAAATTAAGTTGTAT
AAGCTACTCtgcaatgaaaaaatatgttgaCACTACTAACACTGCTGGGC
CTTTATGCCGCTTAGGTCTTATCTAGTCTAGTCTTATCTTAGGTCatatc
tttttattaatttatcaTCAGTCACACGTTTTGATTGTGGATATAGTAAA
GGTTTCTCATAGAACTGGCGAATACTATCTGGATAGTATAGAAGTCTGAT
ATCTTCGTTTCGCCTTTTAAGTCcttaaaaatttcattcataGGTCAAAA
CATTAGCACTAAAGCTATCGGTCGCGAACAGTACAGACGTGTTGATATCA
CTGAAGATTATAAATACCCAGAAGGCTCTGCTTTAGAACTCATCACATCC
CAGCGAGCATTGCATCTGACAAACAACAAGATTGTTAGCGATACAGTGGA
CGACCTTAAGTACAGCCTGTATGCTCAAAATGAAGTGATGGTAGGGAAAG
ACGTGGTGTTGAGGCTACACATCAAGAACACGGCAGTCAACAATCGAAAT
GTTCAGATAATGGTTGGTGGTCATGTTTTGACATATAATGGGATCGCTAT
CAAGAAGCTACCCATGCGTAAGACACATGAAATGGTTCACAGACAAACAG
GTAAGTTTTATTGTTGTGTGATTGTGTGACAATCAACCCTATCTAAAAAT
CCTTTTgttttcatcattgcattgcaTTCTAATCATCTCTAAATCATCTC
TAAGTTGTTCACATTGATTTTCATTATTCTTTCTACTTACCAGTAAATAC
CCCTTAAACCCTACCAAGAAATAGAGGTAAACTCTGTCTGAAAATTTAGG
TGGAATTTGAGGCTGAAAGTACGCTGTCTATGGTTTTCTTCCCTAGAGCA
GTGACGTTTTGTAGAaaccagttttcagtttttcacgaggaaattaaaaa
atgcgccTTTAGGctttagctatttaccccttaaaacctacaagtttttc
tcgaataacTTACTATAAAATACtccttttggtctcaaattCACTGCAAA
GTTAATTATGTTACaattaaataatttcaaaactgtacgttaaaatcaaa
atacaccttaaaacctacaaacattgACCCCTTGCTCACAACTTATTGAA
ACTGCGAATACAATTCAGGAACTGAAccgtgattcaattgatcaaatact
tgctagaaatccattcccaaaacaaaattgtattttcagGATTGCATGCC
CAAAATGCAATTGCGCCTGCTATTTGTCAGAAAATGGCTTTGAAGGGTCA
AAAGTTTAATTGATTTCATGTTTTTCagaatctccatcaaatttgtgata
ttttggtatgcaatatgaccacgttttgagaaagttgattttcagatttt
ataagCCACTACCATAAATGAGATTTAGAATAGGACTTTGAGGGCCTTAC
GATTTCTTTGGAGTCTAACAATGATTTTGCATATCTACCATAAGTATAGA
TACCTAAAAATacaggttttatgaccttaaattcaattgtgtaatctATA
GGTctaaaaaacttgattttttgaagggatttttgataaaattttgaata
actttgcgaattttacgacactttgcgataattaaattaattctcgaaat
taggtattttatgaGCCTATGAAAGTACATTTATAAGAGATTGTACAAAC
aaaagtgaattatacaatattaaattaagtttggtggCTAAGAGAGCCCA
AAGTGCAACTTaataggttttaaggggtatccaatGGTATTTCATGATTT
CCATTTCTTCTTTATTGTTGTCCTGTTTCATTGAGAGTAGTGACCATTGA
ACATTCTTTGTCGTCACTTTCAGATACTTACCACACGGTTTCCTTCGCTG
CTTCACAATATCTCTCTTTGCTGAAACAATCACCTCGACTGCGTTTCCAT
GTCTTCTCAAGTTGTTCTGAGACAAGTCAGATCTACGTGACCGAAACTAT
CGTGACGTTAGGAAGGCCAGAACTTGTATTTGAACAGTTGCCAAGTTACT
GGAAGAAAGGAGAGGAGTTGCGGTTCACAGTTCGCGTTCAAAACCCACTT
CGGCTGGAGTTGACTGATTGCGTTTTATGGCTAGATGGAAACATAATGGA
AAGCAGGCTGTCGCTACCCCAAAGGTGAGTGATGATAGTCAGTGTCATAT
AACTATGAACCTTTTTGTCCCATCtaattgaaacaaaataaagatCAACT
TGCTTAACAAACGATGAAAACCATTTGTTTAACTTTCTTTGCAGGAATAT
ACCAGCTAATAGCTTCCACCAAGTGAATATTGCTTTGGTTCCACAGGTAA
CTATTCTATTTTGTTCTTTTGATATTGATTGAAACATTAGAACTGTTGCA
CGAAATTACTCTAAAAATAACTGAAGGTATATAGTGAATTTATCTGGGGA
AAGAAAATAtgtcttaaaaacaaaactacaatctcaaatattgaaaaaca
tCACTTGAACGCCGTGTTTCTCGTTTCAAAAAGGCTTTCAGTTTTCTACT
CAGGAAAATTTTGTCATACCGTATatcttagactggagtcgtttataatg
cgtgtaatacagtagtcaTATGAtgatacgattattgttactaaatttag
tttgtataaactaaataGATattactagacggttcccgtcgtcgcaaacg
ccggttaagcttgcgcatcaaaagcccttaggatgataaagatggtattg
ctgatgctctctaactttatttttaaggggaattcaaattagttttcatc
aACCACAGCTCGGCTACCATCTTGTGTTACACACATTTTTCATACTAAAA
ttttccctccattactttttgctttatttctgcTATGTGTGAATTAGTCG
TTTAGTTTGCTAGACTACATATACCTAAGGAATTGTCCCCTCatatttgg
acaatttttccaccTTACAGAACAGCACACAAACATGTTGAAATAAGTAT
CTTTTATTTTGTAGTACGAAGGGAGAAAGAACATGATCGTGACCTTTTCT
TCTAAACAACTTGGTGGCTTTCGAGGTTCAAGCTTCATTGATATACGATC
ATAGAAGAGGTTTTACCGACGGTATTCTGGTTATGTTCCATCGATTACGC
CACATTGTAAAGAGAAAGTAATTTGTATTCGTTTCTTg

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033810	XLOC_033810	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_233	supercontig	scaffold_233:729374..737861 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.80312	0.366122	0.754186	0.752188	1.21218	0	1.48884e-06	1.58346	0.647668	1.14275	0.423631	0.532165	1.7791	1.77053	7.40799e-06	0.440956	0.554343	1.82478	0	0.331539	0.310254	0.3356	0.169736	0.665205	1.49593	0	1.36937	0.842553	0.962849	1.0211

Blast

[Close]

BLAST of TCONS_00053574 vs. Swiss-Prot (Human)
Match: TGM4 (Protein-glutamine gamma-glutamyltransferase 4 OS=Homo sapiens GN=TGM4 PE=1 SV=2)

HSP 1 Score: 411.764 bits (1057), Expect = 6.174e-131
Identity = 239/684 (34.94%), Postives = 371/684 (54.24%), Query Frame = 2

Query:  509 DVSVVSVDTKRDLNGRLHHTDQFKTDAMVVRRGQEFLLDVKLSTTFDPSLHSISLELRTGSRPNTYERTLVKIPMVKYLDKIKWGMRIVGKSDSTLQLKINIPARCLIANYELRIVNNLRKVLYTHKQPVYILFNPWSTEDEVYMPNASHLEEYVLNDQGVLFQGSANHISPLRWYFGQFEKISLESAFALLSTTKIRERDTARD---ISRRIAALVNSNDERGVLQGRWGSDFTGGTEPWAWTGSPAILEEYTKTKQPVKYGQCWNFCGLTTTLLRVVGIPTRAISNFNSAHDTDGNCTYDRFYDQNGEFLSRMSRDSTWNFHCWSDAWMERPDLPPGYGGWQAVDGTPQERSNGRYQTGPAPLRAIKEGNVKLKHDVRFLFAEVNADTVYW--SRLSPDQEFRPIRVDRKLIGQNISTKAIGREQYRRVDITEDYKYPEGSALE-LITSQRALHLTNNKIVSDTVDDLKYSLYAQ-NEVMVGKDVVLRLHIKNTAVNNRNVQIMVGGHVLTYNGIAIKKL-PMRKTHEMVHRQTDTYHTVSFAASQY---LSLLKQSPRLRFHVFSSCSETSQIYVTETIVTLGRPELVFEQLPSYWKKGEELRFTVRVQNPLRLELTDCVLWLDGNIMESRLSLPQRNIPANSFHQVNIALVPQYEGRKNMIVTFSSKQLGGFRGSSFIDI 2527
            ++ V+ +D     N   HHT +F+T + V RRGQ F L + L+     S H + LE  TG  P+  + TLV +      D   W   +  +S   + + +      ++  Y+L  V     +L + +  +Y+LFNPW  ED V+MP+    +EY+LND G  + G+A  I    W FGQFEK  L+   +LL+ + ++  D  RD   + R + A+++    +GVL G W  D+ GGT P+ WTGS  IL++Y  TKQ V +GQCW F G+ TT+LR +GIP R+++ F+SAHDT+ N T D + ++NGE ++ M+ DS WNFH W+DAWM+RPDLP GY GWQAVD TPQERS G +  GP+PL AI++G++ + +D RF+F+EVN D + W    ++  +E   I ++   IG+NISTKA+G++  RR DIT +YKYPEGS+ E  +     L L++ +     V +    +  Q ++V++G  V   + +K      +NV I+    +  Y G  + KL  + KT ++  + ++   T++  +  Y   L++L   P +R  + +   E+ +I  +E   +   PE   E LP+  + G+ L      +N L + LTD    L+   + S  +     +      Q  I   P   G K  IV  SSKQ+        + I
Sbjct:    7 ELQVLHIDFLNQDNAVSHHTWEFQTSSPVFRRGQVFHLRLVLNQPLQ-SYHQLKLEFSTGPNPSIAKHTLVVLDPRTPSDHYNWQATLQNESGKEVTVAVTSSPNAILGKYQLN-VKTGNHILKSEENILYLLFNPWCKEDMVFMPDEDERKEYILNDTGCHYVGAARSIKCKPWNFGQFEKNVLDCCISLLTESSLKPTD-RRDPVLVCRAMCAMMSFEKGQGVLIGNWTGDYEGGTAPYKWTGSAPILQQYYNTKQAVCFGQCWVFAGILTTVLRALGIPARSVTGFDSAHDTERNLTVDTYVNENGEKITSMTHDSVWNFHVWTDAWMKRPDLPKGYDGWQAVDATPQERSQGVFCCGPSPLTAIRKGDIFIVYDTRFVFSEVNGDRLIWLVKMVNGQEELHVISMETTSIGKNISTKAVGQD--RRRDITYEYKYPEGSSEERQVMDHAFLLLSSEREHRRPVKENFLHMSVQSDDVLLGNSVNFTVILKRKTAALQNVNILGSFELQLYTGKKMAKLCDLNKTSQIQGQVSEV--TLTLDSKTYINSLAILDDEPVIRGFIIAEIVESKEIMASEVFTSFQYPEFSIE-LPNTGRIGQLLVCNCIFKNTLAIPLTDVKFSLESLGISSLQTSDHGTVQPGETIQSQIKCTPIKTGPKKFIVKLSSKQVKEINAQKIVLI 682

The following BLAST results are available for this feature:

BLAST of TCONS_00053574 vs. Swiss-Prot (Human)

BLAST of TCONS_00053574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
TGM4	6.174e-131	34.94	Protein-glutamine gamma-glutamyltransferase 4 OS=H...	[more]

You are here

TCONS_00053574 (transcript) - C. hemisphaerica