XLOC_012520 (gene) - C. hemisphaerica

Overview
NameXLOC_012520
Unique NameXLOC_012520
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000411:98967..105995-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012520 ID=XLOC_012520|Name=XLOC_012520|organism=Clytia hemisphaerica|type=gene|length=7029bp|location=Sequence derived from alignment at sc0000411:98967..105995- (Clytia hemisphaerica)
TGAAAGGTTCGTGCACCCCCTGTATGAATATTAAATGGAACAGTCCATTG ATTTATAATAAATCAAAATATTCTGATTCTTGATTGCTTGAGCATTCTAT GTATCCTCCTTTTTTTAGGAAAAAATATAAAACAATCACCTGTTAAATAA CTTCAGCTGTTAAAAATGAGGGTCGTCGCGTTAATAAGGTAAGTGTCTTT TTATATATTTGTTTAACTCAGTACCTGCCATGGTAAAGTTGAAGAATACG GCCTGATTTTCAGAGGTCTCTTCAGTAAATTAGGAGTAGTGGTGTGGTGG TCATCGCTCTTGACTCCAGTCTGGGAGACCCGAGTTCGATTCCCACTGTA GTACTACGGTTCACTTGGCAAATGAACACACTTTCGCCCGGCTCAACCCA TACCATGTGAGGGGAATTGGGTACCACTACTCTGATACAAGAGTGTGGAT GATATGCCAGGCATTGTTGTGTGTGGTATCACTTATCCTGTTCCGCGTCT GCGACGAGCTATTATGCTCTCCCGCGTGGTTCGAGTGTCATCACTATGCA TCATGGTATCTGTGTCTCGCGTGCACAGAACCAGCGATGTCTGGATAGCG CTAAGCGTTCCAAATCGAAAGAGGAGGAATTCCTACTTCGCAAGGATTAG GACCCATTCCCCAGTGGGGAGGGCTCATCATATCATCTTCAGTAAATTAG GTAACAATACCTGTTTTGAATTTCAGCGGAGGGAAGGATAGTTGTTTCAA CATGATGCATTGTGTTTACCAAGGGCATGAGATTGTTGCTTTGGCGAATC TTCAACCAGAAGAAAAAGGTAGACTTATTTTACTGGGTCCACTCAGCGTA GTAAATAACCACGTGTCAAGACATATTCTGATGAATCTACCGGGTTGGAA TCCTTTTGTTTTTTACCCTAAGCTTATGTAAATAACATGTATTGCCCATA GCGTCTTACCCTTCACACGGCCACCATTCATAGCGTAAGCTCAAAACTTT TGATCTTTTTAGACGAAATGGACAGTTATATGTATCAGACAGTGGGTCAT GACGTCATCGACGCTTATAGTGAAGCGTTAGGTTTACCGTTGTACAGAAG GGTGATCCGTGGCCGCTCAGTGAACGTGCAAGAAGATTATCAGGTTGTCG CTGAAGATGAAGTTGAAGATCTTTTTCAATTGCTCAAAAAAATCAAGGTA ATAATCATTTTCTTTGCACTTTGAGAAAATATCTGACCTAATGAATGAAA GCATGTTCTACAGGTTGGTTGGCCTTCCAAGATTCATATATTTGTTAGCT CAGAAGCAAACGATGTAGATTTAAAATGAATAATCCTTTCATTGTTAATA TTTTAGGAAGAAATTGATTTTGAAGGAGTTTCATCTGGAGCGATTCTGTC TAATTATCAAAGAGTGCGCGTTGAACATGTGTAGGTAATTGTTTGTCACT TGAAATTGTTGCAACTAACCAGTCTCACAGTTTTGAACTAAATTCAAAGT TTTTTTCATGAAATGTTTCGAATTGGTTCCAATTGGTTCTTCTAACCTCG AGGGTCCAAAAACTTCAGTGCCGTAGCAACTGGCTACCCCCCCCCAATAA TATTTTCAAAAATGGTTATTTTGCAAAATGCAAAGTTTTTCTTTTTTAAT TTGTCATAAATTTATTTTGAGTGCATTTTCAAGCAATCTAGAGCTCAAAA TTTCAAAATTTCCTTGTTCTTAAAACACAGCTGCAATCGGTTGGAATTGA AATCACTGGCTTATCTTTGGCAACGAAACCAAGATGAGCTGCTGGATGAA ATGATTGCTGCCGAAGTCACTGCAATTCTCATCAAAGTTGCTTCGCTTGG TAAGTCAAAATATGAAACAGGTGTTAACAATTGGCTACTTGTTAGTGGCT TTAATAATACGCTTTAACCTGAGAAACTTTGATTTTCTTCAGGTTTGAAG CCATGTCATCTTGGGCAAACCTTACATGAAATGCGACAAAGTCTTCACAG GATGGTAACGTCTGCTTTGTTTAATTGTAAATACTTCGTCGCCGGTTGCC TAGAAACCTCTAGAAGAATTTTTGATTTTTTTCTCATAGTAGAGTATCCA ATTTGAAATTGATTTTTGAACTTTTCGCATTGCAGAAGAAGGAATGTTTT CTGAACGTTTGTGGAGAAGGAGGGGAGTACGAAACACTTGTTCTTGATTG TCCACTATTCATCAAGACAATCGTCATGTAAGTTGATTGGCACTCCAGCT TATCTATCCTTTAAGAGGTTGTCGCTATTGCTTCTAGACCAGTTTCTGAA GCATAATGAACGTGGTTTGGTTTTCCATGAAAGGGTTATCTGTTCAGCGG TTGAAATCCAATATAGATGTTCTTTAATGGAAAGACTTGACTCACATAAA AAGTCCTGAAGAGCTACTGAAAGATTGACGCCAATGGATGTACTGAAATG TCAATTACAAGTAAATCTTTTAATTCCTTACAGAGATGAATCGACAGTTG TGACACACGAAGAAAGTAATGATGTTTTGACCGTTGCATACAAAACTTTT CAAAAGTTCCATCTCCGAGAGAAACTCAATGTTGTAGGTAGTTGAATTCT CCTTCTTCAACAGATGTGAATAAACACAATCTTCGTTACTTCCTACTCGC CATGATGCCTATCTATTGTCTCTTAGTCATAGCTTATCTACAACATCCCT TTAATGGTTTTCCATTCCAGAACAGCAATATGACATTACGGGAACGAATG AAGGGCGTCACCATAGCAACACCTCCCTTGTTGAACGTACATGTGCCACA GCTTTGCTCTAATGATCAGCAGGTATTGTATGCTCCTCGTATGAGTAAAA CACTATCGTTCTCTTGTTTATTCTCCATTCTCTCCATTCTTTGTCAGTGC AATATGCATACTTTGATGAGTGTTTGACTATTTCACAATACCACGATTGT TTTCTTTAGGAGAAAGACAATGCAGATGTAATTTGCACTCGAACTGATGG TAAGCTTTTTCCTTTTATTTTCACTCCTTTCTTTGATCCAGAATGACTAG GGTTGGGCCAGGGTGAGATGGATTCATGGATGTGTACTACCGTTACAAAT CCATCTGCCACCATCCATGTGCACGTACCCAAGTCTTTAAACTGTTTACG CTATCCCAGCTTTGTTTTTACCCCTCATTTTAAGTTTGTTTCTCTTCGAA AGCATTATAAGCAGTAAACTACTATTTCACTGGAGTTACTCTAACTTTCT TTGTAGTGCCCAAATCAAAGGATTGTTGCTTCAGTTTTCGATCCAACAAA ACAGTTGGTTGGGTTAGTGGCATAGTTTGTCCAGTTCAAGAGGACAAAAC TCTTGAAGAATCGACGTTGCAAGTACTCAATACATTTAAAGGTGGGTCAT TTGAATTGTGGCTTTTATTGTGATGTTGCGCGATCGTGAGAAATTCAATC ATTAATCATTCAATCGTAAAGCGTACCCAAATGATAAGTTTTTTTGTGAT TCACACATAATTGTTAAAATTGTTTTCTTTCCAGAGAAACTTGAAGAACA TTGTGGTGGACAAGACGAAAATAATCCAATCAACTGTTTAGTTCATCTTT TTGTTCGAAACATGGATGATTTTGCACGAATCAATAACGTCTACAAAAGG TTCTTCAAAGCTAAACCACCTGCTAGGTACCATTGCTTAAATTACAATCG AAATAAATGCGAGGATTAAAATTCCAAATATCAACCTTAAAATGTTCATC CATTTTTAAGTCTTTCAATCTCTTTAAAAACAACCAGATTCAACTTTTCT TTTTAGAGTTTGTGTGAAGGTGGAATTGCCACCGAACGAACATTTTCGTA TGGACACTCATTTAGTAAACCAATCACAACGTCAGGTGCATTACGTACAA NGTACCATTGCTTAAATTACAATCGAAATAGATGCGAGGAGATTTGATCA CTATGTATTAAAATTCCAAATATCCACCTTAAAATGTTCATCCATTTTTA AGTCTTTCAGTCTCTTTAAAAAGAACCAGGTTTAACTTTTCTTTTTAGAG TTTGTGTGAAGGTGGAATTGCCGCCGAACGAACATTTTCGTATGGACACT CATTTAGTAAACCAATCACAACGTCAGGTGCATTACGTACAAGGCATTTC ATATTGGGCACCCGCCAACATCGGACCATACAGTCAAGCCGTCAAGGTGC CACTTTCTTTTCTTTAGTTTACTATGGGATATAACTCTTTTCGAGTATTA TGGATCCTGTTTGTTTTTTGAAACGTTTGTTGTCGGAACATTCTAACAGC TTCTTTTAGGCTGTCGCCTTTGTATATTTCAGTGCACAATAGGACGGTTG AAGAAAGTGTTCTTCTCGGGTTCCATCCCGTTGCAACCAGCTTCCATGCA ACTTTTGACGGATGATTTTCCACGTGAAGCCATGCTTAGTCTAAAACACG TCCATGAAGTAGCAGAAGTGTTTGCAAACGAACGACACTCGAACGTTCAT TATGGAAGTATCACTTGCTATGTCACCCAATACAAATTTATGAAAATGGC TCAGAACATCTTCGAACATCATCAGGATTTTGTAAGCTTTTATTTATACA ATTTAGTTTATCTCGACAGTCGAACATCTCGAGAGTATACCCCTTTAACA TCTATTGATTCCCCTTCCCATCTTCTTGATAACACTTTCTTAAATCGTTG TGACAGAACTATTTCTGGAAAGTTAACGGGCATCAGTGAACTTCTTTTAT CTGTATCATTAAGGGTGCATACCATTTAACCAAAACCCAAAAAAGTGAAA CAGAGGGTTTAGCGAACGCATTGATTCGTTTAGAATTTTACCTAAACAGA CGATCAAAGCCAACAGTCTTTTTTCTGTGTTTTCTTTGTTTGCTAAACCG AGGGTTTAGCCAACAGACGGCACCATTTGATTTTTTGTTTTGCTAAACCA TTTTTCTAACCAAGCATTACACCTTGTTTACGCTGGTTCGCTAAGTGCGC ACATCCATAAGCCCTAAGCTTTAATGTTTTCTTCAGCTAGGCTACCATTT TGAAATTCGTTGCTGTGACTTCAGGCCTTTAAATTCAAAATGGTAGCGTG AGAAGTGTAAGATCCTAGAAATCGAATTAGCAATGCAATAGCTTCTTTGT TTAGGTAAACCTAACACTCAGACGCATATTGTTCATTTAGTTTCCAGCAG AGAATTACGAAGTAGGAGTGGTTTGCGTCCCTCGCTTGCCACGTAATGCA CGCATCGAATGGCACGTCAACATGGTCATCCCATTGCAACAAGATGAAGA TTGTAGCGAGGATGAGGATGGCCAAGATGAAACTGAAGGTATGTGAGAAG AAATGATCTTTCACATCAAATCGATAAAAGAATCAGAGATATTTGATATG GTTGATTCCTCAACCTAAATTTAATAAAATCAAAGAGGCAAAAATGGGAG TTTTTAACTTCAAACGACTTACGAATAGACATTTTACTTGTCTTTAAAGT CAATTGTCACAAATTAGGTTGTAGATTCGACCTTGTTCGCTTAATCACTT TTTCAAGATTTTTCGAATGTTATTAGAAGCGGTCCAATCAATCGCTTAGC CGCCAATCAATCATTTAGCTGTTTCCATAACTGAGAAGCTATATTGGCTA ATCCTATGGCCTGGGGGTAGGAATTTATTCACACCGTTTAGGAATTAGCA TTTATTTAGCATCTGTTTAGGACTCTATTGAAGATTTTACGGACGGATGT GAAGAAACAATTTTACAGATTAAAGCTGGAGAAATTAAACATTTTCCCCA ACCGTTGAGAAAAAGAGGATCCTCGTCTTGTGTGTCTTACTAACGCATCC TAAGAGTTGATTTATAATTCCACTGTTTTTTTTAGATGTGGTCAATGATG TTTCAAGATATTTCAAGAACTCCAGAGTATTTTCTCTCGGTAATATTTTT AGTCTTTGATGTCTTTGATGGCGAATAGCTAATATTCTGGGGGGGGGGGG GAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNTACCTTTTTAGATAAAATGCTCTCAATTATTT TAACTTTAGATAACCCATGTGGAGTCCTGCGAGAAGTTCCTCCATCAAAA GATGCTCCATTTTGCCGTCTGTTTGTTGCTATTGGTGATACAGCATCACG TGACCAAGAAGTGAAAGGTCTATCCACACTTTGTTTTACTTGATCCTTTT TGTGGTTATATATCTGCTTTCTGAAATTTATTGAAAGGATTTTTCAAATG GTTACGGTTGAGGTCTTTAACACTTTCCATCTGGCTCCAATTAAAATTCG CGAAATGTTGTATTATTTGTAAGTTATATGAGCTGACAAATAACTGTTAC TTTCTCTTTCTCTCTTCCAGAAGCCACAAACATGATATACGAGCAGTTAA AACCAAAGACCATTGTTTCTATTGTTCCTGTTACATACGTGATGGACGGT GCTCTGATGATGTTGTCTTTTGATTTCCATTCTTGATTTGTTTGTTGGGC TTCGCTCATCAACGGGAGAGGGGGAGATGCCCCCTATTTCTTCGGAAGTA CGCGCACTCAAGGACCACTCCATTGAAAGGATACGCTAGCCATTGTATAT AAGACGATACATTGGCTTACAATGAGATTGTTGATACTCAATGGTTACCA ACCAAGCTTACCATGACTAAACCCTTGTTCTAACGGTTTGTTGGTACTAA AGGGGAATAAAACATAATTTGAGGGGCCAACAAGATGAACATTTTATCAA GAGTTTTTATAGTTTTATACTACCAAAAATGCATTTTTGTGTATACATTT TTATATTATTACAGAATATATTATTTTGATGCTTTAATGATTACATTGTA CATGAGGATCAAATTTATTTCTCGTTTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022328TCONS_00022328Clytia hemisphaericatranscript
TCONS_00022327TCONS_00022327Clytia hemisphaericatranscript
TCONS_00022326TCONS_00022326Clytia hemisphaericatranscript
TCONS_00022325TCONS_00022325Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022326-proteinTCONS_00022326-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000411supercontigsc0000411:98967..105995 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.95 5.55 4.06 4.08 6.16 4.5 6.3 6.43 4.99 5.73 5.85 3.92 4.27 4.01 4.52 7.28 8 7.85 1.44 1.96 3.63 4.1 7.32 6.01 4.86 5.49 2.59 2.06 5.62 6.1