XLOC_017157 (gene) - C. hemisphaerica

Overview
NameXLOC_017157
Unique NameXLOC_017157
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000782:6817..13315+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_017157 ID=XLOC_017157|Name=XLOC_017157|organism=Clytia hemisphaerica|type=gene|length=6499bp|location=Sequence derived from alignment at sc0000782:6817..13315+ (Clytia hemisphaerica)
CATCTTTACCAGAAAATCAATGTAATGTTATAATACTGTATTACTTTTCT GTAGGATAAATCTTTCACATCAAAGTCAAACGAGGAATCCGAAAAACGTG GAAAGATGTACAACCATGCTCAACTTGAGCTTTTGAAAAACCTTCTCAAG CATGGGGCAGATGTAAACAGTATACGCAAAGACAAGCATTCGTTATTCAC GTTCGCTTTATCCCAATCCTACTTAAAAATCTGTGAAATTTTGTTGGACG ACCCGAACATAGACTTNACGCAAAGATAAGCATTCGTTATTCACGTTCGC TTTATCCCAATCCTACTTAAAAATCTGTGAAATTTTGTTGGACGACCCGA ACATAGACTTGATGGTGTACGAGAATAAACACGGTCAAAATGTTTTACAC ATGATGTTGGGAAAGCTGGAGCCAGAGGACAAGAAAACTTTTCAATTGTT TCATAATATTCTGAAAAAGGTATCTCACGAAGTCTTTCTttcacaaatta tttttttcatgtaaCTTCCTATGGAAGCCGAGAAAAGTCAGTGCgcggaa atttcaaaaacctgttgcgatattttttaaattggtgCAATCTTGAACAG CGACAGCTTGAAAAATATTGCGATAGCTTCTGGAAATGCCACAGTCTGAA AAATATCGTGACAACTTCTGAAAACGCAACAGTTTTGACAACGCGACAGC TTGAAAAACATTTCGACAGTTTTAAAAACATCGCGACAGCTTGAAAAATA TTGCGACAAGTTCTAGAAAATTTCGCACGCTTACACTTCTCACCTTCTAT AACTTcccccattatggaagcaaacgttcgattttgcCTAAGGGATTGcc ctctacagattcgaacgtttactTCCATAATGGCTACNGATTTTGCCTAA GGGATTGccctctacagattcgaacgtttactTCCATAATGGCTACGTAA CTTAGAACATGAAAACCTCtattattgattttttgaaagaatcaAACATA GTACTGTGAAggctctttaactcgaacctctacaacttgaatgtctcctt aactcgaacaagtctcctggtcccttcagttaaaggccggtctccacttt cgcgcgaaatggacGACAGTTTTTTCCTCAACCTATTTTGCNAAAAGCTG GAGCCAGAGGACAAGAAAACTTTTCAATTGTTTCATAATATTCTGAAAAA GGTATCTCACGTAGTCTTTCTTtcacaaattattttttatttcagaaatt tcaaaaacctggCGCGATCTTTTTCAAATTGTCGCAATCTTGAACAGCGA CAGTTTGAGAATCATCGAATGCCATATAAACATTATGCTCCATACCGCGA AATTCCtataactcaaacaaatttgtgtttcccgtgcgtgttcgagctGT GGAGACTGTAAATTATAtcaatttatattattttctttttcatcagtGTA ATTTGACCAAGGAGTTCAGCAACAAGGTGGACAATAACGGTTTCACACCT TTGCTATCATTCGTCTACAACATTGCAAGTAAAAACCAGATGAAGAGAGC TCTACCGCAGTACACCAAGCTTGTTAAAACTTTGTTGACAGAATGTTTCG TTGATACCGATATTCTGGTTCAAAAGACGGCAATGGGACCTGACGACAAG GTTAGTTTTCTCATTAGATGCTGGTTAGATGCTACACGGACATTCCTCAA GGTGTCCTGTAACCTACCggtcaatgttcttagccaaattattatttttc taattattgaaaataaataaaaaatgtcacggtggagtgtgttggtttga gttttctagagaCTTATTATTAAGCTGCGCATTTTTTTGATAGTTGATTA TTATTAACTAGGTCAGCGCGTTTCAAACACACTGTTGGCGATCGCTTATT TCCGACAAAATCATCGGAGATCTGTAGTGTTCActaagaaattaattttc actTTGTCCATTTTTTCGTTTAGTCGTAGAAGGGCAAGGTTAATGGTTTA TTACTTTACACCCTGCGATGCGGATCTGTCCCTGATAAATTATGGCAAGA TTAGAGCAGCTAGACGAAATTATAAAGTCGAGTAGAATGGTCGATTGAAC CTTACCTctttaaaagttgttttgttACTGAGTCCATGCAATTTCAATTC ACGATACTTATTTTACTATCAAAATCgttgtagtaaaaaacaaaatgttt acgcatgcgttttaaaacaGCTGTGAAATTATTGTCTCGCTTAAAGTAAA TTAATTTAACAGCTCTAAGCATAATGTGGCATATTGAACATGGATAAATG AGACAAACATTGAAATGATAGgggaatgacgtcataaaccaTACAAAAGT GATGAATACAATTGACTACTTAAGGCTGTTATACATTTTATTTGATCTGC AACTTTTGCCATTATTAGTCAGTACATTTCACATGATCAAAGCAAAAGTA AAGCGTAGACCCTAGAGAAAAAAGTTACACTTTGAGGAAGGGGATGGGAT ATAGCctgaagaaaatttaaaatctctcctattcagacaaaatgtaagga aactaatgagtttataaaggtaagcgagtcaaacatttactttcgatttc aaaaacgagATTTGACTTGTATATCTACACTGTTAAAATCGCCCTCAGGC GATCGAAAATatttctttttcaaaagtcttttgttgatagtttctctttc caaattattttctcaaaaatgtttaattttattatcaggtaggtccataa aagtatagctggtgatatcaaaatcaaaatcttcttaATTTTATATCTTC TACTAGCCTGCTCTACAATACACTTTGAGGCCTAAACCCTCCCTGGATTA CGAAAAATCagatgaaaatcaagaaaagttCAAAGGTTACAACAGCTTTG GACAAATGAACATTTTCCATTTACTTGCTATGAAGAATATCAGCCGAGAA GTTATGGAGGTGTTTTacaaacatgtgcccaaaattGGTGAACTCCTGAA TGCCAAAGATCTTCATGGTCGCACCCCTTTACATTACAAGCTGATGAATA CTACCAATTACACGCAAGACTTTTTGGATCATGGAGCGAACGTTGAAATA GGGTCAAGTAATAAGGAGAAAGATGAACTGGCACCTACTCTAGTGATTGC GATGAAATCTTGGATTAAAATCACGAAAGCAGATGAAATTGACGAGGAAG AAAGGTTAGTGTCTTTATTACTGTAAAGAAAGATTTAGTCTAGGAGGGTT TCCCCAATATTTTCACTATTGACTATCTTGCAGTGGTAGATCAACTGAAA CGCTTGAGTTAGTGAAACTCTAAATTCCGTGACTATTTTCAAGAAGAAAT CATAaataatttccttttttcacctgTTAGTTTTGGTAAAATTTTGTTGA GAAGATCTTTTATAACAAAGAtaatgtttttgcttttttcatcAGATTTG GTGGTTCCTCTACAGAAGAAATAGATGACGGCTTATTAGCAGTATTGAAA GAATGCAAAAATGTCAACCTAGTTGACCAGAATGGAATGTCTGCTGCACA TCACGCCTCGCTTAAGAAAAAGCCTTGTAAGTTTTCCTATACATCGTTAA GCTTCCAGATTTATCAGTTGAACTCTAGacattttcaaaacaccaaaatG TGAGCAATTTTAACAGCATCTAACCACGCATCTGATCATAGATCTACCGT ATATGATATCCCCTTCAGCAGCACTGATATCATCAGGACAAAGTTCCAGA TATGCTTAGATATTCAGTTTAGTTTTTGGACCATCATtactttaacccta ttattatcaggctttttcgggttttgtattctcaagggtcACCCCccggt gttttccaccagccttgcataacttttgatctagaaaagatttGGACTTG AAACTTTGCAGAAATGTtttctaccataaaaggagttaatagaaaaaaat ttgggttaatgacgtcatcatgaaggtgatgacgtcatcacaaagtttca caattatcgctgaccaatgaaaaagtactattcaataaattagcaattaa agttgaacgaatggagatttttcaagcctgttttgaatttctaaaagcaa aaaagaataCCTTTAACAtaatttgccggtttttaacatactaataaaat tagggttatattaaaagtcagaaactttcagagtgttacaaaaaattttc agtgagcttATTAGCAAAAGAgggccagcctggtggaaaccccccctgat aaaaataagGTTAAggaataatcagatggtttgtacAATTTTGCATGTGG gatccttctattgtcctgagcaaaatcttaaaatatttttagctaactat tttccaaagtttaGATATATAAGTTACAAGTGTTTGGTTTTtaggatgaa aacaatagaatttgaaCGTAAGAAACGTGTAAGAACAAGAACCCATttgc aaaaatatcaaattttgatatctcgattttggaaaattgttacacaaTTA AATACTTTGAAGTTTTACTAATGACCACAGAAGATTTCTGtaatctaaat atctcaaaccatctgattatccctttaaagacTCCAGAATCTTTTATCAA TTGGATCTTGAACATTTTTCGAGATACCGAAAAGTTTGCAAATTGAAAGA AAGTCAATCTATAAATGAATCTTCATATTTTCTTATAGCTGTCAGCAAGA AAATTGCTATTTTCAAACGTCTCTTGAAAGCTGGTCTCGATGTGAACGCG CAAGATGACAAAAATGGTCGCACAGTGTTACACAATCTAGTAATGCTGGC ATCAGGTGATTATGAAACAACCAATGAACTTGAAATATTGCTGATATCTC ATGGCGCACTATTAGATGTTGAGTGTTCGCGCGGTCGCTTCCCGATTCAT TACGCATTCTTTGACAAATCAAACAGGTAAGGGGATAATTGctttttatt ataaacataCTTTCGTGTTTACGTACGTGTTTCACAAAGCCGATTTTTCG TAAAAGTAAACTTTTTATAAGGCTGGTGTCATTTGATGGTCCTGTATGAT CCCTTATCTACATTTAAACGCTAAGAATCGATATAAAATAGAAAGAGTGT AGAGAAAGTTCGTTTCGAATAGTGCCCGACGTTTTTGACATTTGTCTGCT TGGACAAATAATTAATAtataaagttcttccgtctcattCAGACGGATTT CCGTTTCCAGGAAGATACAAATAAGGCTTCTCTTTCTTCAAGCTCCACAA AATTatgcaaagttttaaaaattgttgtttAAAGTCCGATTTCCAGCCTG GGTCAAAAAATGTGCTTTTACCACTATATAATCAAAGCGATGCGAAGCTT tggatatttttcaaaaagtattcTACTTGGTTGATTCTTGATTTTATTTC AGCAAGAAATTGGACTCGACAAACATTTGCGATCCCATGTCTCTCATTCA TCTTTTGTGTACTGAATACAACCAATCTAAATTCAACATGAAAAATTACG TCAGTCATCAAGACAATGAGGGGAATACGCCGTTGCATTATGGGTGCCAA CGTGGTGCGACTATCTCATGCATGCAGttgaaaaaggtatttttgagaaa ttgtgGAGTAGGTAGGCCGGTTGGCGGACGGGGttattcaacaaaatttt aagaatgtgTTCGTCAATTTCTTGCGTAAAattccgtctcagacgaaaaa ttttgttttgactaCTGGTGATGATGCCTTCTGTCATTGCTCTATCAGTG GATCAGAACCTTCTCGCACGTTGGTCTTGACTTTTATCTTCGTGTCCCTT ACAAATGGAAGACAACCCCCGTCCCCTTGTTTTAGCtggtttatgtatgt gtgttttccaGCGACTGAGATTGTTAGGGTTCGACTTGGCTAGATCATGA CAACTGAGGACGACGCTTAATCAGcatttttaccgtcctcgattttgcgg gtcaaaagctttaagtggacacTAGGCTAGTCAAAACTGAGTTtcattcc aaatcgcttcagtcactctgcTGTCctcaaaaagtgcaaatactTAAACT CGCTAATATCTACCACCTGGACAGCACATGGgaaattttgtttgcttttt cttAGCTTGGTGCAGACGACAAGCTGACAGATAAGAATGGAAACACGCCT TTGGCTATCGCATTGAAAAACAAGCATCATGGGTAAGAATCAGTCTGAga tcaattttctaaaattgtttTCTATTATTAGTTTAGTATCGACCGATTCA AAAGTCAGTTTGAtaccatttttgagaaaaagtcaCCCTTGCTTCTAGAA CGAAAGATAAAGCGGGGTTTCGTTTTATAAGCAAAGTATGTCATGCCTCA CTTCCCAGTTAGCCTGTAGACAATATTGTGATGCAACAGGACGGCTTCAG AAAGCCCATTCTTCATCGAGAAATATATTCCGATACTTAACTTCGCTAAC AAGAGTGGCTTGACTATTATTTTCTTAGCACTGCTATGATGATGCTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00030005TCONS_00030005Clytia hemisphaericatranscript
TCONS_00030006TCONS_00030006Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00030005-proteinTCONS_00030005-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000782supercontigsc0000782:6817..13315 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.3 2.94 2.87 2.99 8.05 5.08 8.09 9.62 5.84 9.19 9.89 4.52 6.27 7.49 4.48 7.26 4.92 5.53 6.69 6.13 4.84 4.61 2.31 3.71 5.83 5.92 2.84 2.78 3.17 2.52