TCONS_00014543 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014543
Unique NameTCONS_00014543
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length580

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014543 ID=TCONS_00014543|Name=TCONS_00014543|organism=Clytia hemisphaerica|type=transcript|length=580bp
GCGAGGAATACCGTAgtaattgtaaacaaaaaagcagCCGTGCCCGGTTA
ATATTAAAGAAGAAAGAAGCATGGCTCAAGCAGTGCCGCCAATCACCTGT
GAAAATTTGAGGCATTTTAAGCTTCTAAGTTATTACAAGGCACGGGAAGA
AGGTATCAACTCATGCATCAACCAGAAAACTGACAGAATCGAAAAGTTGA
GAGAACAAATTGAGACAAACGAAGATGCAACTTTGATGAGAGAATTAAGA
AATGAGCAGAGCAAAttGAGGGTGATGAAATCAGAGTTGCTGGTAGAGGA
TGTCGTAAAAGCAAGATCATTGAAGATATTTAACGAACGATGTTGGAAAG
CTTATACACCACCTCAAAGTTAGTGAACGAAGAAACCGACTATTTTTTAT
ACTGTAAATGGATTTTTGTCTTTTCATTTTGTACAACAGATTTTTTGTTA
CCACTAGTATGAAAAAGGAAATGTATTTTTGAGCATGACAAGATTTGAGA
TAGATATCTTTTCTTAGAGTAGAACTTTTTTAGATTTATACAATAATGAA
tagaatatattttatcaaaattactCACTA
Run BLAST on NCBI

protein sequence of TCONS_00014543-protein

>TCONS_00014543-protein ID=TCONS_00014543-protein|Name=TCONS_00014543-protein|organism=Clytia hemisphaerica|type=polypeptide|length=100bp
MAQAVPPITCENLRHFKLLSYYKAREEGINSCINQKTDRIEKLREQIETN
EDATLMRELRNEQSKLRVMKSELLVEDVVKARSLKIFNERCWKAYTPPQS
Run BLAST on NCBI

transcript from alignment at sc0000190:10013..28007+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014543 ID=TCONS_00014543|Name=TCONS_00014543|organism=Clytia hemisphaerica|type=transcript|length=17995bp|location=Sequence derived from alignment at sc0000190:10013..28007+ (Clytia hemisphaerica)
GCGAGGAATACCGTAgtaattgtaaacaaaaaagcagCCGTGCCCGGTTA
ATATTAAAGAAGAAAGAAGCATGGCTCAAGCAGTGCCGCCAATCACCTGT
GAAAATTTGAGGCATTTTAAGGTGTGTATCTTCactttggatttttttcc
agaTTTCCTATTTAAATGATACTTTAGCAGCTTTCAGTCATATTCATTAC
CTCAAGAAAGCTTTTAGGCATCAGAGGTATTTGGGGTTTAAACTTGATGA
AGGTGAGTGTGCGGTGAGTAGAGTGtgacagtctaaacttaaactactat
atcaggattagaaactaggttagtcttacctcttttatcttttcctttgc
aacaatacaatgctgacaagttgacacaacacatttgtacatgtacattg
acaagtattccctgagagaagtttttatagaaatctgcaacgaacttttt
ttaaagagacctcCACAGTTCGATTAAGGGGCTGTCGACAaataacttct
tttttttaacggcCCGAGGCCGTTAaggttcagaccccctcccccctacA
TCTTAGCggcaaaaaaattcttcaaaagtaaatattttcacTGGTCCATG
TTGCCATGTTCTTTCGATTTGTAATcctcaaagttcttcttttcgcacgg
aataaacatgtggttttgagccGTCAGTcgggcacatcctggcaaattaa
cagggtgagcatttgcatggggtattcgtcacccagtgtaaatgagatag
gacgtctcaggctaaaagcgtgaaaatgaataaaaatgaacttcaaactg
aaaatgtgaaaaaaggaagaaaactgggaactttatttttttgttaaaag
tttcttcaatattcgaagaaaaaattgacccatggaaaaaaaatttcatc
tatgcagttcttcaaaatgaagcaaaatatttcaaacccggttcaattgc
gtggggtattcagcactattacatcacttttgttttcgaccccttgcatt
tgccaccaatcacaagtgaaaaatgccccgttcatttgccaggatgtgcc
tgactggccgtgacctttcaattttgaaactccaaGCCCCGCAGCAAGTC
AGGGTgggatgggtggagcaaggaGTCAACTGAGGCGGAGGGAAAAATTG
CCGACTTTCGTCCGTGACTAGTCATTTTTCTCGTCGAAGCATTAATTGGT
GATCGGGAATATGGTGAATGTCTTGTGGTTGCTTTGGTCTTAGCCTTTCT
TCAcatgtttttactttttggactgatgaaatttgtaagtgagactttcc
ctatttttaaacttttttaacggcattgcagtgaccccctcccacccctt
acggccagaagccgttaaataaaaggaaaactttttgccggcctttgacg
acactttgaggaactttgaaacaccccggctggtgcaggcgtgtaccctc
acatcccccctgaccagtgggcactgATCAAACTCTCcaggacccccagg
ggccgtccacggtggtacccaattgaggtcattttttccaattttgacca
attttcgccaattttcaagcctttccaagccttttaaaggcttcggagCA
CTGATGGAGGAAGCTGGCTTTGAGGgaaagcaaggcagagggtatccgaa
gtgatccgaagggctgtggtaggctgtgggaGGCTGTAGAGGCCTCGATT
GGTCCCACCAGGgctggtacccaaaggaggtcatttttttgcaatttttg
ccggcttttgacaacactttgaggaactttgaaggacccccaacggtgca
gacgtgtaccctcacatcccccctgcccagtgggcaccgatcaaaccggc
cgggacccccaggggccgtccacggtggtacccaaaggaggtcatttttt
tgcaatttttgccggcttttgacaacactttgaggaactttgaaggaccc
ccaacggtgcagacgtgtaccctcacatccccctgaccagtgggcaccaa
tCTGACCCCCGGGACCTCTGCCGGGGGACCCCCACGGGGCGTTCACGGTA
GTACCCAAAGGAAGTcatttttgttgtcaaactttTTCGAGCGGAGTTTT
TTGTCGCATTTGTCAAACCTTTCTTgttgtcgaatttgtcgaacatttct
cgttgtcgaactttgtcaaacttaatatgttttgtcgaacttaattgaat
actcacaattttggcaacttttgaaaagttcaattaaagaatttaatcaa
acttttgtcgttcgattaagttcgacaaagttcgattagttcgataatcg
aactGCTCTATTAATTACGTCTGGCTGATTGCTTTCCAGCGCTCCTTGGC
TGGCAGCTGAACAgcttatcaaatttccacccatGAAATTACCGCATTTC
ACACGACCCTtatttttggcacccgtggcctctcagtgccttgcaagact
ggcggctgtaaaatctcacccttcatataatatatttgtttcaatccatg
atctgtggcttaggttttttctcatcttcaatttactgaagaaagtggGA
ATTTGAGAGCTAGATTACgtcaacaaagtgccataaataaaaaaaaaatc
attgaataaaagaagaaccgtcaactgctctaactcttgggacgattggt
cgaaacaagGGACTGTTGcctatctggtctgtattttcacttatgTAAAA
TTGAAAGAGAAATCGTATATCTCTTAATACGCCGTTCCTTTTAACTCAAA
TCAattgactttggaggtttggtgaaatggtggccgaattatcgtcccat
gttttgtcagatagtcccaagttagagcagttggcggaactttaaatctt
aaatattttcattttcaagaattggtgcaaaaaagtgaaacatggaaaag
ttttttttttttggttcaatcaaaacaggggatttggaaaattttctata
tttgtttttttgcacaaacccttGTAACTACGGGCAAtgcaccctgttgc
taagataccttgagatcgggtaacttgcttcagtggaggctaacatgcat
agccctaaaatgaatgacctggctggtcattaaaatacaaagttaaataa
aaataaaaatggtagagtagagctgtgagctgTGAGTAGTTTATTTCAAt
taccagccaggtcattcatttgagggctatgcatgttagcctccactgat
gcaagttacccactctcacggtatcgttggcttgaaatcgaaagtgaaac
cactgaaaacgaaagcaaAATCAGCCTACactccaaatcacgtaatcttG
ATATCGGAGTTTTGGTCTACACTGAATGAACCCTAGACTGCACACATGCA
CATATATTTTGTGCGCGCAAATTGACAGAAAATATTTACGagctttttgt
taatttcaaatGATTACTTTCCGAGAAATGTTAATGTGATACAGTTCTTT
CTTTgttgaattttctttgattaATTGTCATCActttatcaaaaaacttt
ttaatgcAACAATCAATGTAGAAAATGGTTTGAAGTTTTGGAATTTCATC
ACTTAGTGTTTTATAGTTAGAGCAAATAGTAAAAGTACGATAAAGGAGTG
TTCCAATCAAACCTTTTTTAATGGGCGATTggtaaagaattttcaaaatt
caagtaAACGTCACTAAAAGTCTTTTTGCAAAACGCTGAAGTATTGAATT
TCCCTAGTAATTTTGATATCAAGAAAGGGTGTTCTTCCTCCTCATATGTA
AATTTGATGATCattgaattttaatttaatatttgaATGGCTCTAGCCAT
TCATATTATATCATTAGATTTCTGaagctttaaaaaaattgaaacaggtt
accCCAAAATGTGGGTTATCCATTCTAACAGGCTATCTCACTCAATCCAA
TACTCAAAATATTAAATTTCTTGTGTGACGTCATTGAGCCCATTTTCTGA
TCCAACGAGGGGTCAAGCAGGGTGTCTTccggaccttgaaaaccttgaaa
ccTTGAAATTGGACTaagcaaccttgaaaaccttgaaagtgaatgtaatt
tgaaagaattccttgaaaacattgaaaatgcATGATTCTGACAGTATAGT
TGTCTCGTTTTAGCTTGGGTCCTTCCTGAAGTTTCGGTCTATGCTAAAGC
TCTATATAAAAGTTtcctttcagattttttcagaccAAACACTGGTCGTA
ACCTCTCCTGCACCTTGTCAACACAGTCATATCcagcggcggatctgagg
gggctcaaatggttcagctgaaccaccccaacccttttagtaaataaaaa
aatacaaagaccctttcttcaagtgaaatctagttttcagattgaaactg
atttttcttcttggtcatatctcgatattattttaccaggggttgTATGC
ATTGCGTTTCTGTGGTGCGCGCGACAACCTTAGCTTTTTCCacgctaaaa
aatctttaggttgtgtacggcgtagctagctttcccccgctgtaaaaaat
ctttgatatgatttttgtttttgcgGGATTACATATCTAGCTGCTTCTGT
GCTaggaaatctttaattttgaacctggttcagaaaatgcatccagtgaa
atggcaaatttgaggtggttcaaggaaatttctcgaaaatacgaGACCGA
ACCTGACCGaccgttttgagcgtaaaagaTTTCCTACAAAAATAACATTC
AGTCGCATGTTGTCgccggcaaaatattgaaataatttgaagGGTAGCCA
Ctcgtacggcaaacgacctcacttctttgcaagcgttcaatgcagtgttt
taaagaaaggaattgaagtcctgaaaagtgttAATAATCAGGCAATTACT
TATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATCAatgt
atgatgattttgacaaagactctgtgtgatggaattttcatctgcttttg
tttgatgtggtgaagagtgacaaaagaaaaagaaaagacgaatttcattc
tgaggaaacatttttgttttggtttatctttagaGGAGAAGCATTgatac
caacaaaaacaaaacttaaatgaattttgcttgataaatgaagtttggaa
ttttttatggGAAAGTGCTTTTAATTGTGAATATttggtggaagtttatc
gtgtcttgaatataatcacgagatttacgtttggctcttctcccatcatc
ggacATCGGGAATATCACGGGGAAAAAATCTACCTAGCTATATATGGATC
CCGAGATTTgcgattggctacgtttcgagaaaTTCTTCTCCCAccattgg
acattgatgaatttcacatggctacctttcgagagattcttctcccatca
ttggacattgctgaatttcacatggaaaaaaagctagctagctttattct
caacttcagttgagctacaatctgacaatgtctgtctgtctgtctgtgtg
tgtgtgtgtgtgtgtctgtctgtctgtcacaaaaaNNNNNNNNNNNNNNN
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NNNNNNNNNNaaatttagatttttggggcctggggacgagtttttcgcca
aaacgaggctaaaactttagggcagcctggagacttcaaaaatgcttgga
tttggctggaattttgcacacttgttccttgggtgaatatctgggggtgt
ttttttctttttttgaaaattttgatttttggggtctaGGGACGAGTAAC
CTCCAAGCAGCTCTTCGTGCTCCACGCATTCCACGCATGCGCTCTAAAGG
GAATGGTTCTGCAAGAAGACCTGCAAAGGTTCTCGGGTTTTCTTTGANNN
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NNNAGTTTTTCCCAGACCCCGCCGAACGCGGTTTTGTAAAATTCCGCTGG
AGaaacttttcagatcatcatatgccttagcaatggtgatcggttatgag
attaagggacgagtttttcgccaaaacgaggctaaaactttagggcagcc
tgatgacttcaaaaatgcttggatttggctgaaattttgcacacttgttc
cttgggtgaatatctgggggagttttttttctttttttgaaaattttgat
ttttggggcctaggcacgagtttttcgccaaaacgaggctaaaactttga
ggCANGACTATTCTTGAAAactattatagaaaaacaaaacaaaatttgtt
ttataacagagactggaagaaaggttagggaacaacattttagcaatttg
attgaatttgttTGAAGGatgaaatttctggaaaggtgaaccttcatgca
tgcttcaagataatgtgatgctaggaaatatttttggttttgtcatgtca
taagaagagagagttcataccactttatacttgcaaaacaaaactaagat
tacttttacgtgatcatatgaaaatatggtacttttatacaaaaagagac
attggtgacctctgaaaaaattaccctcttgtgcttaattgtaggtggta
attttgcaattttttggtgaaaatcacCCAATTAGTATTTTGTTATGACc
tccaatttatgaaattttcctgataaggtgccaaaaccttcattttcctt
gggttttttgggaaaatcaccccaaaatcagttaataatgaccccccatt
ttatgaattttctctgagagtACTGCNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGGTCTAAAGTATC
ACGAAAACCATGCCTAAATTTGTGCTCGTTGAGATGACTGAACCCTACCC
GAAGTCGATTTAGAAAGACTACACCTTGATTGTCGGAAACATCAAAAACA
CGGGATtgtttgggtctcaaaaattctaaaattgcaTTCTTAAAGGTCTT
AACAGAAGGTAGATCTCTTATATTCGCGCCCAGGACGTTCCACTGTGATA
TGCAGTAAGGAAAAAAAGTATTACgaaaacgctcagttcgtatattaaga
ggataaataggatttcttgttcttatgTTAACTGGCTCTGTAAGNNNNNN
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TTTATCTCAGGAGTCATCCATAACGCATCTTTATCCCTGAttgttataat
tttgtttgGGACAAAGTTAGAAAAAATGTTGAGGATATATTCCTCGAATC
ATCACTCTCGATAGAGGAATCGAGAAACGACTCACCGACGCAGAAGATAT
CAAACTTGTGAGCACTCAGAAAGGCAGTGATTTgagcaatctttgaaaat
ttattaaccCAAACGCTGTTTAGATTCCAATGAGAAATTGATAAGGTGTT
ATCTTTCTCTCGCGGCCCCGGGGCCgatcactgttttcaaaatattatcc
atttctggttttataatgaaaggtttttgcttgattgtcagccaattaat
tcgctacaaagaaattccttaaaaaatggttataacaataaattatcgaa
cttttttactatgttttaaatattcacgaaatgaaactgaagagtgtaaa
gtatttaatattataaattgtcttattttttcttcaaacttttcttcaaa
acaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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tataagaaatataatactcttatatttctttgctcAAACTATATTTccgt
tttatgaacgttttgtgggataagattgaaaagaagaaactagatgTGCG
TAATTGCggttagggaatttcccaatgtatatatgaatatcaccacaaac
gatTATTACACGTCCAGCCTCTGGCTGTTCAAGCCGGGTCAAAAAAAATG
GCCTGCCGCCCTCCTTTCAGCGCATGTTAACCCGCTGAGGCCTATGTTTG
GAGTTCATAGGTAATGGGAACTGCAGACGTGCAGGCGCTCATTAACGTCC
Cccatgttgaatggaaaaaaggtgacaccgcccaaacagggcaggtgcaa
aatttacgcccaaaacgtttgttccgaaaaattttttttgaaaagagatt
tttgaaccccctcagaaaaaTCCCAGATCCGCCTCTGATATCCTActatt
taagtcaattttaattctgaaaaaccTTGAAGATAACCaataaatggtcc
aaaaaaccttaaaaaacactaaaattttgccaaaaaaccccttgaaaacc
ttgaaagtgGTGACAAAAATTCCGTAGACACCCTGTCAAGGTCCACTTCA
CTCCTTTTCAGACAAGAGATATCACATTTTGAAGTTTCTTCGGGAATTCA
GTGACGTCATGGTCTCTTTATCTTTAGATTTTAGTAGACAAAATTAATTA
ATAACAACCCCCATTATAGACGAAAGTTTTTCAGGCCACTTGGTGATTTT
GAACTTGATAATCCCAAACATAACCCAAACTGGCCTCTCGCATGTTCAGG
GCATGTCAGACCAGGTTTTCAGaggcaaaaaaacaaatttttgtggCACT
AACTTGGCTAGAATATCAATGTTTGGGCCAAAAGAATGTTTTTGCGCGCG
CAGCGCGAATCTCCTTTGGTAAAATGTGCTCACGATCTACTAAATTGGTC
CCTATATATGGCTAAATACTTTTGATAATTAAGTGTTTCTTGCATATGTC
ATGTACCAATTCTCTTGTTTCCTCAGGTTTCTCTACTTTTGATGCTAAGT
CTTCACATTATTTCTTCAGGGAAATATtcctaaaaaattggaaatcaatA
AAACCTCAAAATTCTATTAAATAtcaaacaagaatcgcaaaattgcgNtt
ttttaaagaggcagccatattgaataattatgtactccagcataaaaaca
atgatacagccatgcataattactgtatcatgcatattttaataattatg
cattgctgtatcattgtttttatgctggaggacataattattcaacatgg
ctgcctctttaaaaaaaaggtctatttagcaagatttgaaaacagacact
gcattggtttacaagactagactagagaaagatgtcaaccatccacacag
ttcatgaaaaaaataaagtatttatcaaaaaaaaggttctctattttttg
gtaatcaatacaccgtttaacaggtgTTGGTTGCGCACGTNcaaatttga
atataatgagggcaataagtctggttaaatgttactttattcacaagatt
taaggattactgAAGAACAACACATCATCCCTGCCTGACACATCATCACA
CCCGGTTCTACAATATATGTAGTTCTGTCAATTGGTTgaaatctacaata
tatgtagtTTCTGATAGCACAGAATCTACACATTTTGTAGATTCTAGAAT
TTACAGAACTACGTATTTTGTAGAATCGGGTTGTGATACTGGCCTGTGAA
GAAATACTACtgcagatgaactaaactcaaaaactaaaactttacaataa
atttacattacgacaaagtaaaaatctatctttaatagcaacaaagaaaa
aatgtggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNagaaaagccgctttgaatagatttataaaagatttcaacgacca
tttagatcattaccgagacgttttctctccatctatatctttattacctc
catggagagaccaaatttttagtgaaaaagtgctccttagagagactttt
tcgcaaaattttgttcaattttttgaacATGTCTAAACCTTAGAGAggct
ttttaacaattttttctctcaaaatcaaaaaatttcctaaaatttgtaaa
ttttccaacccttaaagggactactttgaaatttttaaggtAAAAAGCAA
TTCGACCCTtatcgtccgcacatacccagtaCCCTTTTCTGCCAAAGCAC
CCGCTCCCCCGATTTGTGcttgtattttctttcaaaaatcaagAGTCCTA
GAAACTTATGTTGACCATTCTTCGTTATACATccgtcttttttgtttttt
gtttaagCTTCTAAGTTATTACAAGGCACGGGAAGAAGGTATCAACTCAT
GCATCAACCAGAAAACTGACAGAATCGAAAAGTTGAGAGAACAAATTGAG
ACAAACGAAGATGCAACTTTGATGAGAGAATTAAGAAATGAGCAGAGCAA
AGTAAGTagagatttttcattttatataatTCAGGTAGGGGCTGTTTATA
TGGGAGGGAGGCTGGTCCGGCTAGTTGAGGAGGGACGGATTTTCGAACTT
ACGTCGCAGCTTTTGACCaatcaaatggctaaaaatagTAACGCTCAAAA
ATTTATCCAGTCTCCCGCCTCCATATGAACAGCCCCTAAAGCTAATAGCA
AGAGGAAAGGGAGATATGCAAggcacaattttttttattaactaCCAGGC
TGATGGAGGGCTCTAATTAGCCAATTTTTCACTATCTTGTAAACTATAAA
CTTTTTAATtaatctaaccatggcaaacgaTAGTCCTTTTGACCCAAAGC
ATAAATCTGGTATAACAGTAGAGGtgatcaaagcaaatttttcagaaaat
gagctagaatgctaagtaGCCCAAACCCTTACCCAAAAATTGGAGtcgct
tataataaaaatgtgTAGGTGGAAAAAAACCGGGTGGGATAAGAATCAGG
atcattttttaatcaaattcatTAGAAACCTCTTCCTCTTCGCTTGATAA
GAAGATGGAAAGATTTtataaaagtaaaatcaacgAATTTACGgcgaaat
atttttgttttttgttttagttGAGGGTGATGAAATCAGAGTTGCTGGTA
GAGGATGTCGTAAAAGCAAGATCATTGAAGGTAAGCTTAGATTAGGTTAG
ATCCATAACTAGTCTAAGTAGTCGAGTAGTTCCTCTGTTCTGGAAAGAGG
GTTCTATTTGACTGGTTTCTATTTGTTTCTCGGACGAACATcgcggtctc
aggcaaaaatcatagggtctaaatttaatgaaaattttagcttgagaaaa
gagACATGTTGTTTATTTTAGGAAGCTCTCAAAATTAAAagttaagatta
gagatatattgcgagtataggtgagtTTGTTGCAAAATTCGCTAGAATTA
TGTCATTGCCATTATGTCCCTTGAaagattaaatgattttttatgaatag
aaagtagttttattaAAATCCACTGGGAATtaatcaccatggaaatattt
tcaaaacgaggcaagtgatgttcataacgtaatttatgaaaaggtctatt
tagttctcccccccccaaaaaaaagatTGCTTCTTCACCAAAATTATTTC
TCAACAGAACTGACCTGTTTCTCATTCATTCTTCCCATAGATATTTAACG
AACGATGTTGGAAAGCTTATACACCACCTCAAAGTTAGTGAACGAAGAAA
CCGACTATTTTTTATACTGTAAATGGATTTTTGTCTTTTCATTTTGTACA
ACAGATTTTTTGTTACCACTAGTATGAAAAAGGAAATGTATTTTTGAGCA
TGACAAGATTTGAGATAGATATCTTTTCTTAGAGTAGAACTTTTTTAGAT
TTATACAATAATGAAtagaatatattttatcaaaattactCACTA

Coding sequence (CDS) from alignment at sc0000190:10013..28007+

>TCONS_00014543 ID=TCONS_00014543|Name=TCONS_00014543|organism=Clytia hemisphaerica|type=CDS|length=1212bp|location=Sequence derived from alignment at sc0000190:10013..28007+ (Clytia hemisphaerica)
ATGGCTCAAGCAGTGCCGCCAATCACCTGTGAAAATTTGAGGCATTTTAA
GCTTCTAAGTTATTACAAGGCACGGGAAGAAGGTATCAACTCATGCATCA
ACCAGAAAACTGACAGAATCGAAAAGTTGAGAGAACAAATTGAGACAAAC
GAAGATGCAACTTTGATGAGAGAATTAAGAAATGAGCAGAGCAAAttGAG
GGTGATGAAATCAGAGTTGCTGGTAGAGGATGTCGTAAAAGCAAGATCAT
TGAAGATATTTAACGAACGATGTTGGAAAGCTTATACACCACCTCAAAGT
TAGATGGCTCAAGCAGTGCCGCCAATCACCTGTGAAAATTTGAGGCATTT
TAAGCTTCTAAGTTATTACAAGGCACGGGAAGAAGGTATCAACTCATGCA
TCAACCAGAAAACTGACAGAATCGAAAAGTTGAGAGAACAAATTGAGACA
AACGAAGATGCAACTTTGATGAGAGAATTAAGAAATGAGCAGAGCAAAtt
GAGGGTGATGAAATCAGAGTTGCTGGTAGAGGATGTCGTAAAAGCAAGAT
CATTGAAGATATTTAACGAACGATGTTGGAAAGCTTATACACCACCTCAA
AGTTAGATGGCTCAAGCAGTGCCGCCAATCACCTGTGAAAATTTGAGGCA
TTTTAAGCTTCTAAGTTATTACAAGGCACGGGAAGAAGGTATCAACTCAT
GCATCAACCAGAAAACTGACAGAATCGAAAAGTTGAGAGAACAAATTGAG
ACAAACGAAGATGCAACTTTGATGAGAGAATTAAGAAATGAGCAGAGCAA
AttGAGGGTGATGAAATCAGAGTTGCTGGTAGAGGATGTCGTAAAAGCAA
GATCATTGAAGATATTTAACGAACGATGTTGGAAAGCTTATACACCACCT
CAAAGTTAGATGGCTCAAGCAGTGCCGCCAATCACCTGTGAAAATTTGAG
GCATTTTAAGCTTCTAAGTTATTACAAGGCACGGGAAGAAGGTATCAACT
CATGCATCAACCAGAAAACTGACAGAATCGAAAAGTTGAGAGAACAAATT
GAGACAAACGAAGATGCAACTTTGATGAGAGAATTAAGAAATGAGCAGAG
CAAAttGAGGGTGATGAAATCAGAGTTGCTGGTAGAGGATGTCGTAAAAG
CAAGATCATTGAAGATATTTAACGAACGATGTTGGAAAGCTTATACACCA
CCTCAAAGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008149XLOC_008149Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014543-exon-sc0000190-1491911889:10013..10133TCONS_00014543-exon-sc0000190-1491911889:10013..10133Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1510915933:10013..10133TCONS_00014543-exon-sc0000190-1510915933:10013..10133Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1575043694:10013..10133TCONS_00014543-exon-sc0000190-1575043694:10013..10133Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1491911889:26420..26563TCONS_00014543-exon-sc0000190-1491911889:26420..26563Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1510915933:26420..26563TCONS_00014543-exon-sc0000190-1510915933:26420..26563Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1575043694:26420..26563TCONS_00014543-exon-sc0000190-1575043694:26420..26563Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1491911889:27183..27242TCONS_00014543-exon-sc0000190-1491911889:27183..27242Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1510915933:27183..27242TCONS_00014543-exon-sc0000190-1510915933:27183..27242Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1575043694:27183..27242TCONS_00014543-exon-sc0000190-1575043694:27183..27242Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1491911889:27753..28007TCONS_00014543-exon-sc0000190-1491911889:27753..28007Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1510915933:27753..28007TCONS_00014543-exon-sc0000190-1510915933:27753..28007Clytia hemisphaericaexon
TCONS_00014543-exon-sc0000190-1575043694:27753..28007TCONS_00014543-exon-sc0000190-1575043694:27753..28007Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014543-proteinTCONS_00014543-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000190supercontigsc0000190:10013..28007 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
255.134	251.22	146.495	146.077	121.35	92.5297	77.5777	76.3104	67.9317	55.3976	50.9606	55.4079	31.6722	29.5234	60.1648	72.8408	102.943	81.526	13.215	15.3178	54.8276	56.282	128.613	112.94	28.4398	31.6128	64.513	48.4189	54.0247	51.3659
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR019171Caffeine_induced_death_Cid2
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00014543 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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