XLOC_009098 (gene) - C. hemisphaerica

Overview
NameXLOC_009098
Unique NameXLOC_009098
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000232:229782..235500-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_009098 ID=XLOC_009098|Name=XLOC_009098|organism=Clytia hemisphaerica|type=gene|length=5719bp|location=Sequence derived from alignment at sc0000232:229782..235500- (Clytia hemisphaerica)
ATAAAAACTAAATTAATTTAAAACAATCAAAGTAAATATACTTTTGAAGC AAGCTCGGAAAAAAAATTCAAGGAGCAAGACGTAGTATGAGCAATGAAGA AAGATTCAAAATGTTCTTTCTGTTTATGACCTGCTTGTTGTCGGACTTTG TCCCACATTGTGTTCACGTACTTTTAACTTAAGTGGAAATTTGCTATATA AATCATATCTCAGAAACGGTGATTATGTGGTGTGTTTTTGTATGGTTTAA CAGCTCTTGATCAAACATTTATTCTGGATAATGGAATTTAATCAAATGAA GATTTGGACAATTGGACTTTTTCATAGACAGTACATCAAGATGTTTGCTC CTTTATCTTTTCAAAACATATCTGTCAAACTATTTTGCAATCATAAAGAC TTTGTACAAGTAGCAAAAGCAGAACAAGAAATCGATGCCAAGTTACTTTG GACATCCTCTATAACTCCAACACAATGGCACACTAGAATTTCATTGAACA TTCTTGTAGGGATGAGAGATTCCGGGGTTCCACTTTTCATGGCGTTTCTC AAAAGTGTTTTCGCGTTGTGTTATACAATCGTTTGAAGTCCAAGAGGTTA ATCTGTTGAGTTGGCAATGGAAAGTTGAAGAAGCTGTACATTGTTTTTTT CTTGGGCCCTTGATTTTTAACCTTGAACCAGTGGAAGGATTGACTAGTAG GGTGATGGAGATTAACGATGAGAACGATTTTAATTTAAAAAAATGTTAAT ATAATTTTTTTGAAACTTGTTTTTGAAATACTTATACCTTCAAAGCCTTT TTGTGGGATACAAATATTAATCAATCATATGTGAGCTTTCAAAAGTCTAG CAATTCCATTTTTTTTTAGATATGCAAAAAGAGCAAATTTAAAAAGAAAT TGAAATTAACAATTTGTTAAATGTCGGTCATTCCAACTGGTTATCAAAAT GAGATTGCTGGTCCAGATAAAAAGCTTTTCGAATGTCCAATTTGTTTGTG TATCATTCGTAAAGCAACTGAACTTCCCTGTGAACACTTGATGTGTTCTG ACTGTTTGCTTCACTATGAAAACGAAGAAATTCAAAGAATCAAAAGGTAA AAAAGTTGTTTTACGTACAATTCAATTCCGAAATTTAAACGAAGGCCTGG CAAATCCAATCCATAAACTTCTTTTTTATTTCAACGTCAATACATAGAGC TGCTTGCTGTTATTGCAAATTGTTACCCATCATACTAACTATCTGTTCGG GCAATGCCGTAAAATATTGACGTATTCCTCACAAAATCGGTATAATAGGG TTAATAATTACTTCAACAAAAATGACCATTCGTTTCAATTCTTACTAAAC ATATTCAACGTCAAGGCGTTCTAAATTGATGGTCTACATTTATGTAGTTT TATAAAGAAGACATTCCATTGTCAAATAAAACAATGAACTGGCGTATATC GCGATTTTTTCTTTTTTAATGATTCGTTTTAACCACTAATCTCGAACTAC TTGACTGGATCGGGCAACCCGTATATAGGCAGCGTGCCCAGGTTTAGAGC TGAATGTTTTGAAATTGGAACGTTCGAAAATCTAAGATGGGAAAACAACA TTGCGGACTAGTCGTAGTCGGCTTCAAAAGTGGACACACTTCCACGGGAA TTCAGTGAGCAGNGATGGGAAAACAACATTGTGGACTAGTCGTAGTCGGC TTCAAAAGTGGACACACTTCCACGGGAATTCAGTGAGCAGTCAGCCTATC TAGTGTGTAAAAGAATATGATATCTGTGTTTTAACAGCTGTAATGTTTTC GTAACGATTCGGACCTCAATTTAAATATTGTTAATCTGGGCTTTAATTTC AGAGAAAGGCTCAACAAGAGTGCTACTGTTTATCGATGTTCGATTTGTCA AACTCCTTATCAAAGAAATAAGGTTAGTGTCTCATTGGATGTAGTTGCGT TTGCCTGTATTTGTAGTGGTACCTGTCTCTGAAATTACTTTTTGATATTT TCATTCAAACAACAAGGATTTAACAAAGTAAAACTCTTTGGGAGCGGACG ATCTTAAAGTCTGTCTCAAAGTTGAATGCAGCAGAGACAAAGTTCTGAAA CTGTGGAGTGAATCCGAATTAGATATAGACTAGACGGTTACCGTCGTCGC AAACGCTGCTTCAGCTTTCACATCAAAAGCCCTTAGAATGATAAAGATGG TACATTTGATCCTCTCTAATTCTATTGCAGAGGCTTCTTCGATTTGAACG TCAAATCCCTTTTTGGACGGGGGTTTTACCGGAATGAAGTGCTAATTTTT TCACTCAATCATGTATGAAAAATGAAAGTTTAAACACACAGTTAAAACTT CGACTTTAAGAACTATGATAAAATTTTGACAAGAGAAAATTCTTCAAAAA TATCTATTCAATCGAAATTTTATCAATGATTGACTTTGAAAATAATAAAA AACTAGCCCTTTTCATGTAAACCAGGGAAGGTTTTAAACTGTATTTTTTG ACTGAATAAATGTATCTTTTGAATTTTTCTTCACATTGATGCAATTGAAC AATTAGTTTACTAAAATGGTGATCAAAGCATAATTCTGCAAGCATTTAGA ATTTTTTTTATTTGATAATTTTCATATTCTTAAAATTTATCTTTTCAACC ATCGCAATTAAGTGTTAGAATTTTATCAAAAGTTACTCCCATTTTAAGAA ATACGCAGTGAAATCAGTGGATCGAATCATACAAAGAGATATTCCTGTAA ATTGTTTACAAAAAGATTGCACTTGGACTGGCTCTCTGCAAGATTATGAG GTATATATAAAAAAACGTATAATTATAAATATATTAGTGCCTTTTTATGT TTCATCTTTATTTTATTTAGTATTTTCAACACTTTCTCTCCTTGAGGTCA GATCTCTGATCTTCACCATATATATATATTTTTTTGAAAAGTATGAAATT AATTTGAAAATGAGCTTACCTACTAGACATGCCCCATTGGGTTGTAAAAA TATTTTTGATACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAAACTGA TTTTCTCGAAATCTAGAAATTTTAGAAGAACCATTCCTATTTCATTGGAG AGAAGAAAGATAAACTTAAGTTATGATGGGTCATTTATTGAATTCGGTTC ATTAGATCGAAAGTTATACTCAATTGATTAAAAAAGTTACTTTCAGAAAG TGCTCGAAAACGTTAAAAATCGACCTATCAACTTTTCATTTTAAAATTGC CAATCGCAATAGGCTTTACATGATTAAGAACATTTTTCAGTAATCAAACA CATAAATTTTGAAACTGATGGGTTCGAAAGGGTTTAAAATCTTCATCAAA ACCACTTAATTTACTTTTACCGAAATTTTCCTAAGATTTTTGGTACAAGA ATGGATTTAAAGTCTATGTAAGGCTGGATGTACCTCGAAACCCATATTTG ATGTATTTTCATGAATTTTACGAGATTTTTGGGTTTTTTCGACGAATTTT ATTCCTTTCATTGAAATTCGACCTTCCTCTATATTATAACAAAAGGTCAT TTAGACAGCTAATTATCATTTTTGATGCCTGAAACGAAAATACTGATGCA TCGTGTAATTATGCTTCTGTTTAATTTGATAGGTCGATTTTTAACGTTTT TGAGCACTTTCAGAAAATAACTTTTCTATTCAATTGAGTATAACTTTCGA TCTAATGAACCGAATTCAATAAATGACCCATCATAACTTAAGTTTATCTT TCTTCTCTCCAATGAAATAGGAATGGTTCTTCTAAAATTTCTAGATTTCG AGAAAATCAGTTTTAAATAGGGAATCTTTTTTGTGGCGCACCCGGTATAA GCTTTTGGAAGCTTTTTTGCACTGATTTTTAACCGAAGCAATACTTTTTG TGCTGATTTTTAACCGGAGCAATACTTTTTAGGAACACAAGTCAATTTGT TTGGAGAAGGTTCCTTGTCAATATTTTGACCTTGGGTGCTTAGAACTGGT AATTTTAATTATTCTCTACTTATTAACATTTCGATAGTTTTTTATTTCAC TTTGTGTAGTGTAAACTTGTGACGGGAAAATTTAAGTAGCTTCTTTAAAC CGTTTCACCGCTTAATCTTTTATAGGTTGCACAAAGAAATTTGAAACAAC ATAATGAAACCTTTGGAGATTTTCACCAAACTTTAATTTTGGACAATGTT AAACTTTTGATGAAGGAAAGAGCTCAAGATCGGGAGAGGATTCAACAACT GCAAAGCCAACTGGAAAAAAATGACAGACAACTCGGAAATTTATCTAAAG AATTAAAGAACCAAACTGATCGCCAACTGAATTTACAAAAAAGTTTAGAA CAATACAACAAAAGCCTTAAATCAATCGAAAAAGAAATCGACGATATGAA AATAATGCTCAAAAATCAAACGAAAGAATATTCAGAAAAAGAAAATGATC GTGTATCGAGAGACAAAGAATCTTTTATGAAGAAATTAGAAGACCATCGC AACCAAATTAAGAAACAATCTAATAAATCACAGCAATTAGAAAAAGAAAA TGCAAATTTGAGAGAGAAGTTGACAAGTCAAGGTAAAAGGATCCAGCAGC TCGAAGAGAAGTCTCTTAACCAAGGTAAGAAAGATCTCCATAAAAGCTTG GACGTTCATTCTAAAGATATTTCGGAATTGAAGACTTTTGCAGAGCAGAT GAGCTCTTTCCTCCATCGATTATCGTCATGGGAATTCATGAAAGAAAAAT TCTATAGATTCTTTCGCGAAAACGATTACGAAGATGATATAGGTTTGAAA GAATGGCGAAATTTCTCGGATAAAGTTCTCTCTAATGAAGAGAATGTGGA TTGTGTTTATTTGAAAGAAATGAAGGATGCCATCAAAGGGTACAGCCATC ACCTCTACCCTGGCTGGTACACTCGGTTGAACCTTTTGGCAAATAAACTG GACACTGGTGTTATTGATCGCCATTATCATCTCAAACTCTACGCACCGTG CCATTTCGATTTCATATCTGTTAAAGCGTTCAGTGATGTCATCGGTTTTG AGAAGGAAATCAACAGTTATCATAAATGGTGCAGATATTCAATTGATGTG GCAAGTTATCACGACTCTGAAGCAAATTGCTTTCACGTTGCTTTAGTTTG TGTTGGTGTGAATAATATTAGAATGTTTAATTGGTTTGATGAAGCAGTCG AGATACGAATTCCTGTCAATGGAAATATTGTTGACTTGAGTCTATTCTCA AATCATTCTTGTGTAGACGAATGTCGAATGATATTCCAATTAAAAAACAT TTCTCCTTGGGAAAAGTTTAAAGTTTTTGTCGGCTGATAGATAAACAGTT TCCTCTACTTTCTATAGGGCTTTTCCAGAAAAAATTCGTTCATGGGGGGT GGAGGATATATTATTTTTCTGTGATTTACCCCTGGACATTTCGATTTTTC ACCCCCTGGACACGTGTTTTACCCCTGGACAAGCATCAAGTTGACCCCCT GGACACAAATATTTATCCCTGGACATCGCAGATTCACCCCATGGACATTG CAGTTTTTCAGGGTTTTTTCAATACCCCTGGACAATATATCCTCCACCCC CCATGAATGGTTTTTTTCTGGAAGAGCCCATTCGAAACTTAAGGCAGAAT TCGAAAATAATTTGAAAACAAATACACAAACCGAAAAACGAGAAGAAAAA AAAACGAAATGAAAAACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00016310TCONS_00016310Clytia hemisphaericatranscript
TCONS_00016309TCONS_00016309Clytia hemisphaericatranscript
TCONS_00016308TCONS_00016308Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00016308-proteinTCONS_00016308-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000232supercontigsc0000232:229782..235500 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.44 5.67 3.58 2.46 2.05 1.51 2.96 3 2.58 1.83 1.85 2.08 1.68 1.73 2.58 2.86 2.72 3.38 1.26 1.87 2.13 2.02 10.45 8.48 2.56 2.96 1.41 1.63 5.13 6.74