XLOC_010178 (gene) - C. hemisphaerica

Overview
NameXLOC_010178
Unique NameXLOC_010178
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000290:275455..279541+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010178 ID=XLOC_010178|Name=XLOC_010178|organism=Clytia hemisphaerica|type=gene|length=4087bp|location=Sequence derived from alignment at sc0000290:275455..279541+ (Clytia hemisphaerica)
aaaataattgaacttgTGATGGTTTCTTCAAATACTTCACGCATTCATTA
GCAGCTTACACTATTCACATGGAAGGATTTTGAAACTGTTCGATCAGACG
TATTAACAGTTAAAAAATAACTCTTCAAGAAAAGCCGAAAACAAAAGGCA
TTTGGTAGAAATAGATTTTGAGTGATCAGAGCTGCAGAGAGAACTTCAAC
AACAACTTTTCACTTGGTTCAATAAACTTCAAGATGACGACATCACCGTC
AGCTTTACAACAAGTTATTGATGAAAAGGAAGATGAAATCAATGTTATGA
GAATCGTCGTTGCTGTATTGGCTGTTGTCGTTTTGTTCCTATTGATCATT
TTGGCATACTGCACGTGCACTAAAAGGTCAGTAAGCTAGGGTTATGATtg
gtttttaaaaatcaattctGACTTTGAAGTTGAGAGGGAATTTAATTAGa
cttcaaataaattttttttgcatacaTTAGTAGAGTCTCCACAACTTGAA
CCTCTCTTACTTGAACGTCTTCTTAAATCGAACGAATTCAATGGCACCTT
GAAAAATTCCTAATAAACTCTTAAAATTTAAAGTATAAAGCAACTAAATC
GCACTGTTTTTGTATTTCACCAGCCCAGCAAGACTACGTACTTAATATAC
TGTTCTAGGTTCATTTAGCAAATAAGGgagaaactttgaaaaaacttgaa
aacctCCATTACTCCAATGACTTCACAACTCGAGACTCTgtacattttca
ggatttggATAGTCAGGGTGGCCTTGATTGCTCTTACGAATAATAAAACT
GTTCAAAAATCCATTTTTCTCATGAAGGTACTTCAAGCTGAAGTTTGGCT
TCTGAAGTAAAAGtcttaatgaaaatttttactcCAATTTTCTCCAATGC
AAATCTTCGGAAAAAAAACGGGAATCTCGTAACTAAAAAAAACCTAATAT
AGTGCTAAAGCGTATTGTCGTTGAAGTTGAACCAAACGAAATGTAGcgga
aaatacaaaattgtaaaatttgaccAATTAATTGAGTGATTTTTCTTTCA
TTAATCAAACCCAACCCCTTAAATAGACTAATTTGTATCAGCTTGTTGAG
CTACAATGGTATTCTATAATGAACGTACATGGAAACAAAGTTGTTGTAAG
ATCCTACCTATCCAGAAAGTTACTGAAATAGTTTAGCAAAAGGTTTGAAG
CATGAAATTTCCATTTGACCCAACTAATTTTTATGCTTATGCACAAAAAT
ACAAATTGTAAATCTAATTCTTCAATGGATAAGAAAAGcttatttttttc
gtttttcaggaAAAAGCACTCGAGACCAAAGGACGTTGAGATGAACAAAA
CACAAGATGATGACACTGCAAAGGCCAACGGTGACCAGAAAAACAACCAT
CCTTTTCAAGATAAAAACTACAGTGAAATTGACGAGAGCGACAATCATAA
CCACAAGCAAGATATCCCTTCAGTAAAGGTTACACAGGACATACAGGCCC
TCTCACAGCCCGATGACCAAGATTCTCTTTATGAAGCAATGACCGAGGCT
ACGACTCCAAAAATCACGTCCACGAAACGACATAACCAGACATCTGAACG
GTATCAGATGAAATTGACATTGAAGCTATGCGTCGGTTATCAAGATCGAA
TAGTATGTCTTTGATTAATAGCCGTTCAAGACCAACCACCCCTACAATCG
AAGGTGCAATCAACAGGGTAGAATACTATGAAGCAATGGGCGATTTTGCT
CAGAACCAAAAGCCAGTCACCAAGTCACTATCCATGCCTCCAGCTCGACG
ACAAGTCAGTGAGCCGTACAAAGAACCGATTTATTCTGAAGTAAACACGT
ATGATAGGTCACTATCTGTACCAGCGGCTAAACACCAGAGATCGTGCAGT
CTAGACGGTCGACAATCTATACCGAAAGATCTGTTAGAGAAGAAAAGAAT
GAGCTTACCACCGCCCGCCAAACCGCCCCGTCGAAGCAGTCTCAAAAGCA
ACATTAGCAGTGAGAGTGGAGGAGGAATCATATACTCACAAACATATGAA
TCAACAAACAGCCTGAGGAGTCTTGACAGCTGTGACGGTGACTACATCAT
ACCTTCTTCTCGACCAAGTAAAAAAAGAGCCCCACCCAAACCTTTGCGAA
CAAGCACCGAGAATTTGTATTGCGTACCGAAGAAATTCGATCGGTCGCAG
TCGCAAAAACACTTCCGAACTGATGATAAATCACAATTGATATTGAACAT
GGAGAAACAACCAACCCGATCACGATCCGAAAAACCGATTCGGGCGACCA
AAAGCTCTCCACCAATTGTTGTACAAGATTACGAAAATTTCGGGTTCGAC
AAAGAATTTGACAACGGTGAACATACGCATAATAATAATTCGACAACGAA
AAATGGTAATCATAATATTACTGAGAAAATGGATAATCAGTACGTCATAC
AGACCAGCTATGACGGTTTAGATTATTATGGAGATAACGAAGTGTATACC
AGAATGGATGGTGATGTTGAAGGGCAAAATACGAACAGAGAAAGTTCAGT
TTATGAGATTGTTTACagatgattttgtttttgacaaacgaacgaacgac
ggGATGTGAATTAAGAAAATGGTGATTATCAATATTATGTTGCGAAGAGG
GCCGGGCAAAGAAAATTATCAACACGGAAAATTAATagtttccaattttt
aaaaatttcgctcGGATAACTCTTGAATCATCATATGACATAATTGGAGT
AAAATGATGTTTGGAAAATGAGATTGATAAGGATGATACATACATACAGC
CGCATGAAGCCATTTTTTAGTAGTCCATGTACTATAGGAGCTTTTTGGAG
TGAAATTTTCTAATTCTAGATAAATACATTTGATTGCAATGATGATATAC
ATTAAAAGACTATTAGTCAGTATTCTAATGATTAATGtgatcattaaaat
tttggCTAGATGACAACGTTGCAAAAAATAGAACGAATTGATTTGTGTTT
CTATAGGAGAAAGTTAATGACTACAACCACAGTTTtcgattgaaagaaac
ttttttatgatttccaaataAGAGAGGTTCAaaaggaatatttttttttg
taattatatTTCGAGTTAATTGTAACCAGTCAGTTGCCTTGGGCTAATTG
TTAAGATATTGTAAATAGCACTATTAATGAAATACGGTAATAAAAAGCCA
CTGTTTCGAATCGATTTCCATGAATTGANGAATTTCGGGTTCGACAAAGA
ATTTGACAACGGTGAACATACGCATAATAATAATTCGACAAGGAAAAATG
GTAATCATAATATTACTGAGAAAATGGATAATCAGTACGTCATACAGACC
AGCTATGAGGGTTTAGATTATTATGGAGATAACGAAGTGTATACCAGAAT
GGATGGTGATGTTGAAGTGCAAAATACGAACAGAGAAAGTTCAGTTTATG
AGATTGTTTACagatgattttgtttttgacaaACGAATGAACGACGGGAT
GTGAATTAAGAAAATGGTGATTATCAATATTATGTTGCGAAGAGGGCCGG
GCAAAGAAAATTATCAACACGGAAAATGAATagtttccaatttttaaaaa
tttcactcGAATAACTCTTGAATCATCATATGACATAATTGGAGTAAAAT
GATGTTTGGAAAATGAGAATGATAAGGATGATACATACATACAGCCGCAT
GAAACCATTTTTAGTAGTCCATGTACTATAGGAGCTTTTTGGAGTGAAAT
TTTCTAATTCTAGATAAATACATTTGATTGCAATGATGATATACATTAAA
AGACTATTACTCAGTATTCTAATGATTAATGtgatcattaaaattttggA
CAACGTTGCAAAAAATAGAACAAATTGATTTGTGTTTCTATAGGAGAAAG
TTAATGACTACAACCACAGTTTtcgattgaaagaaacttttataTGATTT
CCAAATAAGAGAGGTTCAAAAGGAATATTTGTTTTGTAATTATATTTCGA
GTTAATTGTAACCAATCAGTTGCCTTGGGCTAATTGTTAAGATATTGTAA
ATAGCAATATTAATGAAATACGGTAATAAAAAGCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00018127TCONS_00018127Clytia hemisphaericatranscript
TCONS_00018128TCONS_00018128Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00018127-proteinTCONS_00018127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000290supercontigsc0000290:275455..279541 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.17	0.05	0.61	0.71	0.16	0.07	0.02	0.04	0.03	0.07	0.18	0.01	8.41	10.19	9.95	11.37	2.01	2.05	0.11	0.12	0.03	0.05	0	0	0.08	0.12	0.02	0	0.02	0