XLOC_010997 (gene) - C. hemisphaerica

Overview
NameXLOC_010997
Unique NameXLOC_010997
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000331:89873..101035+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_010997 ID=XLOC_010997|Name=XLOC_010997|organism=Clytia hemisphaerica|type=gene|length=11163bp|location=Sequence derived from alignment at sc0000331:89873..101035+ (Clytia hemisphaerica)
atttcatgttttggtGCATTTTCTCACACAAGTCTATTTGTCCAGCGGCG GGACGATATTTACGCGCTCTCTTCTTTTTCTCAAGCTGCTTTAAACCAAA CTTCAGAACTTCAGAACTTTATAGTNCGATATTTACGCGCTCTCTTCTTT TTCTCAAGCTGCTTTAAACCAAACTTCAGAACTTCAGAACTTTATAGTCA CAACATCAGCTGATGCATCTGATGCAAACTTCTAAAGGTAACTTATTCGT TGATAGACATTAAAATGGACGGAGTTCATTTCATGGACGATCCAGCTGTA GAGCACCATGATGAGGGAGTTGAAGAAATGCAGCAGGAAATGCCTGAAAT GCCAATGAATCCTGGAGAATTCAATGAAATTCGAATGATCCTGAATGATC CCCTACGACACACTATAACGACATCTGTAGCTTTTGATACACATGAGCAA TTATTTTGGGCAGGGACACAATCTGTAAGTATATGATTGTAATATTGTAT TAATTAGCTGGTTTTGGAAAACTGAAGACTACACAAtaATAGGCCAGacc caattgattgtttggttccTGTCCTAGAAGCTTTGACAAATGGGTCGGTG GGTCGGTTGGTAGCTAAAATTAgaacctttttttcatttccccaccaaaa acctcaatttttgcCAGTCTGGAAAGGAGGGAAATGTTACGCGTACGCCG GAGCTGCTCTGCGCCAACTTAACTGGGAAAAGTTGAGGGCAGCAGATCTC AAACCTTAAATCTACGCCAGAGATATCCGGCGCACAAGCCGCAATTTCCA Gactggaatttttgaaattcctctttaaggggtcactcacaaatcgattt taagttcAAATAACGTCATATGACGTTTGTGGGTGGGTGGGTCAAGGTAG GATGACGCTTTGAATGGGTTataaaaaacatcgattttGAGATAGAGCTT TCATCTAATATATTAtctcttttctattttgtataatgaaagaataaaaa atataagtgAAATGATATAAAGTACAGAACAAACAGTCAAACCATAACCA GACAAACCAGACCCCTCAAAAGTTAAGTTTGTATAACGACGGCTCGACTT TGATCGCtgcattttgtattttgttgacTGTTGGACTTAGACGAAGAGCA CCtcgaaaattatcaaataaaaggAAAGCTGCGGAAAAGAATACGGAAGT CTCGGAAAAGAATACGGAACTATTTGTCCGccgaaacattttcatttttt gcacgCATCACACTCCAGCTGGAAGCAACGAGTACTTTGGGCAAGCATCA AGCTTTATCAGTCTGGGCAAATCGGGTCTAGAAACCAGTGGTCAAAGCCG CGTTGGTTTTGTTGGTTGGTTGCAACACTCGAGTCGAAAATATGGTGATG GCATTGAGCATGAGTTGTTGTTGGTTTTGACGTTTTGGCTGAAGAAAAAG AATCAGAAGTACCAGATTTTTTTGAGTGACGTTATGTGGGGTGGGTGGGT GGTTTAGCTATCAAAACGTCATATGACGTTATTTgaacttaaaatcgatt tgtgagtgacccctaagcAATCAAGACTGCactggaatttttgaaattcc tcttGAAAGCAATCGTACAATCCATGGAATCCAACCGCGAATGTAAAGAA ATAGCCTAAAGCCCGGATCCACAAAGGCACACGCCGCGACCGCGGTCGCA AGATAACTTTTACACGAGGATAAAAGGCGTTTGCAGTGTGTGCTTTTAGA GGAATACAGCTGTGACTCTCTGCTTTTAGGTGCTTGATATTCATTCTAAG TACGGGTTACACCAGGACATTTTTTGTGCCTGAAGTGgatgttgtttttg tttatagAAAAATCAAAGCAGGCAGTTAATAAAGAACCGCAGACAGAGAT AGTAGTTATCATGTAAAATGgaagtaaatattttttgatttctccGACtc aaacagttagtcacactaggaaatcaagctttcagaaaaaataacatcag tcatctacaggatgtatttgcaacaacaaggatgagagttacctgaNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNtttgaaacaaaataaaacgtgcagcagccaaaa tcaaccaaccaaaatttgtcattcaattccagACAGCGCtgcgattttaa ggccttgtttatctgctataaagtaaaaacaattccgcacatttAAATGG GTCAGATCCTGctaaatttccgggaaatagcctatccggcagtgcgcgga tctaggtgggttccgtcttccccgtagatctttttcttgggaagttgatc ttcaaattagttctcaaggttggcttggctcaaattttttcatctttggc tcaaattttagacaATTTCTCTCATAGcttttgagaatgttaatttcatt aaaaagagccgggttattttttcatgaatcccatttttttgcttgagagt caggtaaacgatacagcgctttcgcagcattaatctttgatacgcatttt ggcgggacgctggtgtgactaactgtcaaagtgaaacactttttctcaaa aatttagagTCAGTCGGAGGACACAAACCAAAttatcaattgggcctggc catATTGCATATTGTTTTGATAGGATTTCAGCAGCCATTTCTTTGTGTCA GTTTACCATTATCTTTCGTAAGGGGgcatcacaaatatcttcgatTCGct tcgcccgaccgactcttgaaaattgagtagaattgagtcagTGAGTCGTT AAATTTGTTGGACTTTTTCTGTCGAAGacgtttccttcgttcaaaaaatt tattattggcaattttttgcgatttctAGTGCATTTTTCTAGTGaggcat tttgactttgtttatcattacatgcacCATTTTGGGTCAGAGGTCAcagg tcataatttgaaaccacccataaaacgcggttgttttggctgctggttgg ctggcagtttccttcttcaagaatacactccaaaaatggatgatggatgg atgaaaacccaaaaaaatttaagacCGACCGGTCGACtttttttagaccc aacgagaacgcgaaatgaagatatttgtgattggccaattttcgttttta tccTTTGCTTAGGAGAAGAAatactttgaatttttctttattgagtTGAT TGCTTCAATGTAATGCTTGGAATCATTTAAAGACTTGTGCAGGTCTTTTT CTGTTTAATTTAAAGAAATTCTGTTGTTATTTATGCAGAAATCATGCATT ttttgttgacgtcaaaccaaatgttttagTTTTCCGTGAACTTAGAACCC TTCTAACTTTTGTCTATGTATATTATGCTAAAGCATTTCGGTTTTTACTT AAAGAAAGCCAGTGATCTTCTTAGCTTTCCAgtggtatataacactgtgg acacaggCTAGACAACATAGCTTCACCCCCTGGCCGCAGGGGGGGCTAAA AGGTGTAACAACAACTTGTAAGTACCTAGAAATAGCTTTAGGTCAAGGGC CACCTACTCAGCTACTAGGGGTCACTTACATTTATTCAAACTAAAATGGG GGCTGAACTCTAAATTATTGTGTTAATTTGGTCACAGCGAATTTAGAGTA AAACTTTGTCCATTTCATAGATTTCATTAtacattttttcacatttaaca AAAATTCTGTCTCAGTGAGACAGTAAtatctttttggatttttgtcaaCA GGTTTATGCTGCATTCAATTGTGCTTAACAATGAAATTAAAGCgcttctt atttttcaaattttcatagtttcaaaatttgtttgCCATGGGAGAAAAAC ATAGTtaaaggctgaaactttgtatctttatcagaaaaaggttgacgaat tcaaaaatcaaatttgctaattctattctttcattttcatgtattttttg gacctacctggaggtcctttaatttggccgttgtccgttcgtctgttaca agcttttttcGGGATCGGCtccttagtttttttttattttttgcacagtg atgcaaagtggtgattcccaaaaagtgacggagcttgatttacgaaaaag aatttttttgggcaaatttgggccaaaaagtgcctaacaATGGGGTTTAT TAGACTTTGTGTAAAATTGCTcgtattttctgattttatgcataaagatg gataaaaagtggctgaagcagtttttctcggaaaattttttttagccgTA AAAAGATTGGATagatatttttttcagattttttgcactttgatctaaaa tggtaatatttaaaatctgatgaagtctgattttcaaaaactaattaTTT GGGGTATTTGTGCGaaaatgtgcctaaaaatggggttttctggaatttgt gtgaaattgcttcattacatttttcaaattttttggacaaagataaaagg caaggttctctaaaacgcGACTTAAGCCTTTTTTTCCGGACAATTTCTTT GGCcgtaaaaattggattttcttatttggggaaattcccttatgtcattt ttagggaaaaagagcatttctcgcgattggattgatatatttttttcaga tttttcgcactttgatgtaaaatggtaatctttaaaatctgatgaagccc gattttcaaaaagtaattttttgaagcaaattttggccaaaatgtgccta aaaatggggttttctggactttggGGTTTTCTGTGTGAAactgcttcatt agttttttcaatttttttggactAAGATAAAAAGCAAGGTTCCCTAAAAC GTAACTCAAGGCGTTTTTTccggaaaatcttttttggccgtaaaatcgga ttttctcatttggggaaattcccttttgtcatatttagggaaaaagtagc atttctcaagattggcttggtattttattcttattttttgcatagtgata TAAAATGGTAATTTTTACTTTCtgatggagcctgattttcgaaaaaataa ttttttgagcaaatttttaGGCAGAAAAGTGCCTAACATgggtttttttg acattttggactaatttgagctgtgatattcacggtaatctattcaagct gctcattacaatttcttactctcttgctatttgtcatatttttatctgat tttgatcaccaggtaggtctgttcagcatgttgcttgtttcacttaattt tgcttctttagcatttGAATATccctaaaaaaagtttttatttctgctgA AGTGGATtgtcttttcatttggggtttctcctttcagaaagaCTTATATT CTTTAATTATTCAAGGCATAAAAAGTTCCTTTTTAAAGAAACAATACCCT TGTAAATGAAAGTTCTGCTTGAGTTAAAATTTTTAACAGAAACAAAAACC CTGCAAAATAAGCTTCAGACAcgtaccgtattacttcgaataaacgccca ggcgttaatttaattttttcgattttaggagggaCGTTTATTCAAGGGGG GgcatttattaaataatttcagTCTAAAGTcaaatatttagagcaaatat actctttgttttagttctttatcaggattttagtgcaaaatttctttggt tcaacgactaaaattgcatcgaaaactgctctggttacaagaaatgacta aaattttccttttcaaacccaatcaacactggtattgaagtattaaagtc GTAAGTTTCCAATAAACGTCTCTCCCCTAGAGGGGCCATTCgttcgaagg gggcgtttatttgaggtgGGGGGTGgacgtttattaaataattttaaaag taataCGGTATGTCTATTTCTATATTGATATTTTATCTGGTTTTGTTTAC AATACAGTAAATTTtacttatttaattttttcagggACATATTACTTCTT ACTATGGATCATCACTTCAAAAGTACACTGCCTTCCAAGCTCACCACTCA GAAATTAGAAAGATCCTGCCCGATATTCATGGAGTGCTATCATTGTGTCC AGATGAAGTACGATACACAACAAAGCAAGGACTGAAAATATACTCTGCAA GGTTTGTTACCCTTTTTATGAATAGGGCCTAAGACCAGGCAAAATGAGTG CCTGCATGTGCTGAACATAATTGTTTTTTTAGGTAACTggaatgcactgt aagggtagaactTTCAGTGAATCTTGGAAAAACCAGGAATTGCTAGGCAG AACCTCTtgaacattttgagaaaatgcgCTACAGCTTTTTTCCTGCAAGG GAGTGATTTCAGAAgccaatttattttatttttttcgcagACCTAATGct ccaatatttttgaatttttccgaAGAGCTTTCAGCAGAGGTGCTTGAAAA AGGAGgttttatagaaattttctaCAATCAAATATCttgtgaaaaattaa aaaaatattttatagggATGAAGGTATGACTTCAATGAGATCAATGGTCA GAGGAAACGGAGCAGCTGACAATTATGTTCTTATTGCTGGTGAAAACGAA CATTTTTATGAACTTGATTTAACCTCTGGATATGTTTACCAGAAAAGCGA GGTAAATAGTTTTTGAAATGATTTAAACTAGACTTTTTTTTTCTGCTTAT TATTTAACAAGAGGCTTGGTTTCAAGATAAGAGGCTTGCAAGATTATTCT TCTCTCCTTACCTTATAATAGATTAgatgtttactttttttagaCAAAAA CAGTGAACCTTTGAAGGTGCTTAAGAATTGACCATCTGAAGAAAAGTTAA ACCCAAAAAAGTTCTATAGAAAGAATTTTATTTGTACCAAAACTATATTC AGCATACCttatgattttgaattttaataccCAGGGAGCTCATATTTAAT GTTGCTTTTCAGGATAGGTGATCTGATCTCAAATTACTCTTTAGGTAGCC TGTGAACCTAACACTGTTGTGGTCAAGCAAAGTAATCATTATCTATGTTG TGGCCAGAAAACTGGACAGGTATGATAGTgtgtttaattttaatttataa aaaacACAACTTTATNAGTAATCATTATCTATGCTGTGGCCAGAAAACTG GACAGGTATGATAGTGTGTTTAATTTTAATCTATAAAAAACACAACTTTA TGTTGGTCCTTTAGTTTTAACACATACAGGGACAAGATTTGCAACTAGAG AAAAAACAAGATGGTTACATTGACAATATTTGTGACTTTCCAAACGATAT GCCACACCTGAAAATCCAACCGGTCTTGAGGTAGTTCTTAAATGCCTGGT AAAAACTGACCAAAAGGCTGCTGCAGATTAGGTTGATTAAGCAGACACTT TAAAGCGTCTATTTCAACAATCGGACTGGTCCCAGACCATTCTTGATTGA CCAGTCATCAttactttaaaaaatttgttttaatgTCATCATTACCAACA AACACAAAAtggtaaataaaaaataccGGGAATGTTAAATCAACAGGCTG TCTGCGACTAGTTAAGAGCAGCAAGGACCAGCAaaactcaaatttctttt ctagTTTGAAGACggcttcaaaacaaaactggGTTCAAATTCTCAATTTT GTTGCTATTATGTCACTCTTTATATTGTACCAAGGCAAGTCCtattttca ggtacttaaaattgcttggggagtcacattttCTGTTTGCAATCAACTGT TGTTGCTAAAAAACCTGATTTTAAAGATCGAATGAAAATCCAATCTTGGT ACTATAGGCTTAAGAGTTAGCCAATCATTAACCtctatttgatttaaaaa tcaagCTATTACTTGAGACTAGCATCCCAATAATATCGTCAACAATCAAT CGGTAGTTTATATTTAATCTTGGTCTCACTGTTGAAAACAGTGCAAAATT TATTCAGATCAGTGAAAATTACAAAGTCGAAGTATAAAATTTTGCTTTAC CAATTACAGGTTGTTTTACACGATCCCCAATCTTTGGAGGTTTGCCATAA ATTGGAAGCACATTCTGGATCACTATCAGATTTCGATTTCAATGGAAATC TTCTGGTTACTACTGGTTTCTCAAAAAGGTTTGTGTTGTGTCAATTGTTG GGTTTTCTAAACATTTGCGCatttaaatctatttttatccGACCCATTTC ATTGCAATTATTAACCAGGCTACTTACTGTGCAAAAGCTACGTCTGGTTG CTCTGACTGACACCATTAATGCCTTCTTCTCTAGTCAAAATGATATGTAT TCCCAAAAGATCATAATTACTAATGATACCAAAACTCAAACCTTCATCAA TGTATTCAATACTTTGAACAGAGGTTTCCGATGATTTTATGCATTTCAAG AATTACGTATTTGCGTTTTATCAGTTTTAATATATGAGAAATTATAAAtt gattatttcaaaattttaggtaCAATCATCTGATTGTTGACCCTTACTTA ATGGTTTATGACTTACGCACACTGAGAGCTTTCCCACCTGTTCAGGTATG TGGCAACTTTTCTTCGTATCTCAAATCATTTTAACCTCCCTTTTTTTTCT AATGGTTCTTCCATCTCAAAATTCGGCAAAATTTAATAAAGAGTCTGGGC TAATTTAGTAACCCTTGTGTAATTTTTGTTTGagaagaaaatttcaactt tgacCACTTCTTTATTGCATATAGTTTTTTTAACAAGGGGCTCTTCGAAA AAATGTCTGTATATGGGGGGTGGaagatatagtgtccgggggtagtgaaa aatctacaaaatttaccttgtcctgggggtaaatttgctctgtttggggg taatttcgCCCTGTTTGAGGGTGANtggggggggggggggtgtcaaAAGT CATAATGTCACAatgaaatgttatatcctccacccaccacattcaatttt tttctggaaaggcCAAGTTGATTGGGTGCTTCTTAAAAAGAAAGGATAAG TTTAACAAGCTTAGAAATAATTAgtctgttagacgaaaaccacTTTTTTA TCGCGTTTTAGcataaaacaaataaacaatTTGCTTTTCGGAAGGTACTG GCTAATAAATAACACAATTGTCACATTGTTCCTCTTCAGATGCCGATTGA ACCATATTTTGTGCGCTTCTTACCGACATACACTTTGAGATGTCTTGTTT TGTCATTGGTAAGCATTACATTATCACCCATTGTACAAGAAGAAACATAA CCAAaaatagactggagtcgtttataatagTGTAATACAGAAATAATCGA ATTAATGTGATGATTTTTATAGGCGATAAGGTACCCGGTTAAGATTTTAA TTTCTCGTCAGGAATATTGAAAATCGAGATGAACATTGAAGTCTTTTTCA ATGGCATTCGTCAAGTAATGTCTGCTTGAACCTGTGAATTAAACCCTATT GAATTAATTTCAAATAAACTGAAATAAATCAAATCTTGTGTCTTCATACT TCTTAGAGTGGGCAATTTGTAATTTGTCAACCAGAGAGTCTGGTGGTAGA TCCCGGCCTTTACCAACTCAATAACCAAGGTTCCATTATGGATGTGTGTA TATCGGATACTTATCAATGTCTTGGGATTGGAGATGACGCAGGTTTGAGT CCCAGGATGTTTTTAATTCCCTCTCAAAGACATTACATAAATCGGCATTC aagcaatttaaatttttgtacTTTGAATTTTATTTGTAATGCAACCGAAG TTTATAGATACAAAAATCTATCAAAAGGAATCTCAGCtagtaatgtttaa aaataacaGTACGCAGGAGCTAGGTCACAAAATTCAGTTAACGGTTCGTT CTGAGCAAGCCCAATCTGTATAAAACAATGATTAGGATTACAAAAGGAGG AATCATATAATCATGTTACAATGAACAAGAATGACCCTTCAAGTTCAAGG ACAAATATTAAGTTCTTGATAATAAGTACTTCTAATACAGTATAGTCTCG AAACTCCTACAACTGGAATACCTCTTTAGCTCGAACTAGACAAGTTTATC TGATCCCTTTACGTAATAAATCCACATAAACAAGTACccataatgttttt aaattttctcttttcttcatTATTTAACGTTTTCATGTGTTTGATGTTCT GCATTCTTTGAAGGTTTCGTCCATTTGTGGGCAGATCGAGACGAAGAGCA AGTCACGTTCAATCATCAATCACAAGAAACTGTCTTCCCTGATGAGGTAT TAAATGAACACCATCAGCGCTAATACTTTTGAACATGACCACATGATGCA ATAGTGAATCGCCTTTAAGAAAGCTTTATTGAAAGTATTGaagcaaaaaa taaagaaataaaaaactaactgaagaaaaaaatttgaacgaAATTTTTGA GGCTCGCCATCTATGAAATATTCTCAGCATTGTAATTCTCATAAAGTGAA AAAAGGTGTAAATAGGTAGAACATTCGGCTACGGTCCACAAAGTGCGTTG TCCCTGGGGAAATCCTCCTCTGCCTCTTGGTAGACAGCTAAGAAAAAGGA GGCTTCGacctgcggtcgcaaacttacttaatcatctttttttgattttt cctgtATTTCATGTTATATATTCAATAGATATATAGAAAGAAGTGCGTTA TAGTTCCTTAGTATACCAagactttcgatttcttttccagcttcaacatt ttGATGCGTTTGACATCGATGATTGGTCGATTTCGTTGAGTAAAATACCC ATGCCTCAATGCTCGTAAGTTAAATCTATTCTTGGATGAGTCTTGGTTCT CTCAAATAAAGTTCAATAAGAGTCTATATTTTAGCAGAGTATCCTTCTCA GACCTTTATTTATATTACACTTCTTGATAAAGGATGAAATGCATCATGCT ACAGTGTAAATTTCTTAAATCTTGTTGCACAGAAACTCATATTTCTCCCT ATAGGTCTGCTATAATTTTCAACTTCCATAGACGTTTCTCTCACTTTATC TTTTTCGTCAAAAACGAGAACTAATACGGATAACATAATTGAATTTAGCG GAAACGCTTAATCATGCTTGTTTTGTTTAGTTGAGCCGAGTTTGGTAATT TATTTCTAGAGAACCTTTACTATCTGATTGGCCAGAGCATTTAACCAAAA GAAATGATAGGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00019563TCONS_00019563Clytia hemisphaericatranscript
TCONS_00019564TCONS_00019564Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00019563-proteinTCONS_00019563-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000331supercontigsc0000331:89873..101035 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.74 20.97 8.05 6.96 46.51 37.09 26.44 33.25 14.29 16.83 17.59 16.74 18.04 20.3 19.91 29.68 23.47 26.03 15.21 12.56 17.67 17.2 23.71 25.6 28.15 27.18 7.03 7.14 17.44 19.26