XLOC_012423 (gene) - C. hemisphaerica

Overview
NameXLOC_012423
Unique NameXLOC_012423
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000406:39913..46601+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012423 ID=XLOC_012423|Name=XLOC_012423|organism=Clytia hemisphaerica|type=gene|length=6689bp|location=Sequence derived from alignment at sc0000406:39913..46601+ (Clytia hemisphaerica)
aaagcTCTTACCACATTTCTCGAATCATTCATCTCAAGTCAATAACAGAT TTAGGAAAGATGACTTTCTTACGAAGAATATCTCTTTTGCTTCTGCTGTT CGGTGGTTTTCTTCTTAATGCCGATGCTGATGTAGACGTGGATAGAATAC GGAACACGTTATCGAGAGTTTTACAAGATCCAAGTATTCCCCCTAATATT GCAAggtaaaagaaattatttttgattctCCACTAATAGAGCTTCTATTA TACcccttacatccctgtctcaaaaaTTCGGCGTGATTTTTACACtcaat tgaaatgaaattttaaaatcaaaatctcaATCTGAAATATAATAAAATGT ATTTACTTCAACTCAAAAAGTGGGAGCGATTCCCATTCAACGGGAATGGT tgtcactgggcgaaataagagatttccaatcctgggAATATCTTgaaact ttggaaatatagaaaagtcattttttcatatttacaaCTGTATATGGAAA TATAATATTTCATGGTATTTCCAggattgaaacatcatattttcaaaata tttccaaattttggaaatatgatttttcaatatgaatttcagattttgaa atctcttatttcgcccagtggtGTTATAGTAATTTCCAATTGGTATCTTT CCCACTGGGAAGTTTGAActttgattttcatcaatttaCTGTAATTGTAG CTTTCGAAAATCGATTTGAATTACTTCCTCGATATAATTCAAGGAGTATA AATAGAGGCAAGACTTCACAGAGTTCATTTTTTATTGGGAATAATTTCTG GTACCCTTTAGTCCTAGATAGGAAGAAAGTACAATGAGAAAAAGCTAAAT AAATATGAGCTTGCTTCCTAAGCAAGCTTATTGTAGAGGGTTTTTATCTT CTCCTCGTAGAGTGCTTcctataataaagagttgacacacTATCtatgtt tcaaactcagagttccATGGTGCTCAGGCACCAATCATCAGTGATTTTCA GCTGCTCCGAGTTTGAAACAtagatattgtgtcaactctttattataggA AGCACTCTACGAGGAGAAGATAAAAACCCTCTACAATAAGCTTGCTTCCT ATTTTTGTTTCAACGACAATATAGGTACATTGCAATGTTGCATGATggta ttgattttttgaaatgcttGCCAATCTACAAAAAAAGTAGCAGATGTTAT ATCTCCAAAGTTTGCAAAACACCAAAGCTGAATGTCAAGGGAGTGCTGGT TCCATTCCAAACTGAGGTTTGAATTTTGTTATTCAAAATTGTTCCCTGTC TTTAAATAAAAGCGACGCTTGCTTAAACTTGTAggtaatgacaaaaaata acacaaaggatttattatacactggatatacaagtaacagacttttgccg atttctcgtgtactagctatgtccgcagtaaagatattattgttcactct ccttccctcattaaatgatttttcgaagcatttttattgcatttcttatc gaaaatcactcatccaattcccaaaaNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccggtggaaaaataggcc aaaaaattgTCCCCGGtaaaaaaataccctacattttcaaccccactggg aaattgccctatgattctatccccattgaaaattgaatagaaaaaattgg actccaaaaccatccccactggaatttttgagctggaaacaaaagatttt ctattcccattgggatttcgatagaaattttcatcccaaaattttcaaac ttcaacctcaaaaaaaccaccttgccatccaccacgtgcctccaaaggat tttcataccacagtggagccaagacactcaaatcttatgtatgttaatct cagctcttctagggacagtcttggaaagatattcccaattgaaaatttcg tgtcactataagcattttgtctgaatttcttgtccaatgatgtttttctc acattagatttcacaaatgtatccagcttggaatgctagccttacttgCT AGCcttacaaactttttttctgcaaatgtacaaaaagaaagagcaaGAGA ACTTCTTTAAAATAAGACTGAtgataaagatttttaaaaatcagacatct tcgagccgccatgacagttgtcctttgcgggcaaagctagaacatcaatt gttttctgaaacaatggaaatacaatgatcgctctccatcgttttatgag tcatttatccagtgtataataaatctttgatgACACGCAAAAAGCTAACA GTTAGGTTTATAATCAGTCTCATACTTTGAGCCACTTGCACCAATTTTTC ATTATACTGGATGTGACACGATGTTTTGTAAGCACTATTTTGATCATAAA AAGCTAAGCGACAGGAAATGAGTTTGATTTTTAATCTAAGCTTTCGATGT ATCTCAGACGTCGTCTATTTATATAGCGGATATTTGTATGGAGCTGCTTT ACCCATAGTCATGGGGTAAAGTCAAGACTCAGACTTTTACGAGAAAGAAA CACCATACACGATTTTCTATAAGGACATCCAATGTTcataactttttgac ttttaagccaTAAAATGTACTTAAtatgttctcattttcaccattttctg tGTTTTTGTCCATGTTCCTAAGAATTTGGATGTGAATCCTCAAAgtctta aaatgctcttaactttgtACTTAACAAACCGAAAAAATGGAACCCTTCTC CTCTCGCCTTAGATCTGTAAAAGACCATACAAGATTGTGATTCATCTCCA GTCCTTTAAAACACCTTGGTATGCCACGCCCAAACTTCGACCAATCACAA TTAATTTCAGAGACGACCATAGAAACGGGATGTTTAAAATTCACAGCGAT ACCACTATAAAAGCGCACGTACGATATCTAAGGTTCTTTAATACAGGTAT GTTTCGTTTGGAAATGTCTTTAACATAGCTCACATAAACATGCTTAATTT ATTCTTGTAGTGTTCCAACTATCGTTGACCAGGAAAGATCTTCTCAAAGC CAAGGGTGCCAAATAAGACGAAAAATGCGAACAGTGACAAGATTATAATA CTAGCCTAAGAAATGAAGATTAAATGGGATCACTTCATAACTAATCCACT AATCTAGGCTTCAGAAAGAAATGTTCAAAGGCAATCTGCACTATCAAATA TAtctcttatctgatattccgatggcggattggcggccgctcacgctaaa gctctaaagggagcgggccaatttcccatcggagaggaatgatagtcggc ctttggcgtgccgcatcctcagtcgggttcaacagtcCTTGCCCATAAAC CTagaatatttcggttggacccgccaatccctgagggctgggttaccaga cctcccgcagcaaaattcttgacgcagtctcgcaaaattccgtaatgtaa accttccagatgttgaaaattttaccgaccttcagagctttagcgtgtcg gatgaaaatttcaccatctgggtgccagataaataTATCTCGAACCTAGA GCAGCCTTTGTGAGCATTACAGCAGAGTCATATAAGAAAAGGATCTTGGT GCGAATTTACCATTCGCCTGGACGACTTCATACTTGACTTTCTTCGCCAT AGGGAAGGTGAGGTTCTTGATCAATGGGAAAATAAGATATGACTGCACGA AACCACGTGGTCCTTACAACTGGTTTCAAAGAggtgagaaaaactttttt gctcagttttttttatcatgGTTCTGAATACATCTTTTGTGATTGGGTCA TTTCTTATAATTTCAGCCTGGGAATACAAGTTAATTTGCGCTACACTCTA GACGTAAACGGAATCctgatattttttgttgataAAGACTTTTTTGAGGT CGAGttccctgcaaaattttaaaagccaaatcATAAATTAGGTGCTTTAA TTTACTTGAGGAATATTAAATATTAGCCCTAATCACGcactcaggatcta aaagctccgCTCAAAAATATTCTATTATGGAAATATGGCTGGAAACAGGG tattaacctttcaaagccgctaacttttttgaaaaaggccaaaaagttta tcatttttttctggagatttattctttcaaaggcaatttctcgaccagga caaacgattcaggtaccaactttggtatcgttggaaagctcttctcaggc aaattaaggcctatccagatttttcaaacttacctcaattttttatcacc gtttccacttatcatagcatatcacttcatatatcgaaagaagcgtattg gagtgtagatcactggaattgctgtgccataattaattttttcacccaaa aaaagatattaggcaaaaaccaaaaaatgctgacgtcagcaaaacttgtt ttttgaataactccaatttggcttatggtaaaaacatgaaatttggacca aagttgcacaccattaaaaggatcattttgaaaaaaaaattttgaaattt tgctgacgtcagcacttaattgaaaaatttcgtattttgctgatttctgc tgacgtcggcaaaatttgcaaaaaaaNaagaaacaaaatttttgaatttt tgctgacgtcagcagttaattgcaaaatttcgtattttgctgatttctgc tgacgtcagcaaaatttgcaaaaaaaaattatacaaaaatgttcctatta ttgatatgcaacttttgtccaaatttcatgaatataccataagccaaact gtctaatatctttttttgggcgaaaaaattaattatggcacagcaattct agtgatctacactccaatagGCTTCTTTCGATGCATGAAGTGATATccta tgacaagtggaaacggtgataaaaaattatggtaaaCTTGGACGTGCCAT AATTTGCCTGagtttctctcagctacaaaaaatagcagattttttttctc tcaatctcaagtggtcaggagttatgaccaaaagactgtgtatcggtaaa ataaccttttcaaaacgtatatatacgtatttcGCCTACTAAGGGTatta aggcggggtcaaaatgcttgcaacgttacaaatcatttctaggagctcat tttcatttcaaatgaaGGGTATCAACAAGTAGAATAAGATTCAGATGTTT TCTGATTAAGAAATTTGGCATAATTCGcaaaaaacttagattttgCGTAG ATagatttttgctattttgatgacgtcataaacatttaAGTcctaataac ttttgatttaagtatcgaaattaattgaaattcGTCCAAAGATGCACATA ATTAATGTTTccagaataaaaaaatttgcttatgaaatttgatgacgtca tcacttttcgactgaaaaaataaaaatgaaatactttaaaatactgacgt catcataattttaaaaatattttgaaatcttgcTTTTCccgcccgaactt taaaattttattttaaaaacgaCGAAATacctagactatgctatagtcta agacgaattcgAATCTCGGGTGACACTGATTGTAATTTAACGTTTACTCA ACCCTCGATCAATTTCTTCTGTATTCTTCAGGTCAATTGAGTGAACAGGC CCCTCGTGGTCAATATAACCGAATTTGGTACAAACTTCTTGTTCGATTTG AACTCAAAACTAAAGCACACAAACACTGGTGGAAATTCTCTTACAAATGT GCCAAAAACGGGTGTAAAGATTTGGTGAAGAAGAGCGGCACTTTGGGTGG CCATGCGGTTGCGGGTCCACAGTCATGTAAGAATGATGTTCTGAAATACC GGAATTACTTGTTGGAAAATCAGAGAAGGCGTTGTCCGGGATGTGTGGAG CCATGATATACTTATGAGACGCTCAGTTTAGTGACTAAAATGGTAAACGG TTGGTTTTATTAGAAGACCCAGTAAAATTTTGCCGAACCTGAggattttc ttaaatttctattgttccaaacaatAGAACTTTTGTTCTGGAGGCCTAAA TCTGAGGctagtgttcttataaaattgttcttacaaaTAAAATAGCGCGT AGTTGAAAATCTGTATTTTTTGAATTCTTACAATATCTTTTTGGCGAGGG AGTAACAATTTTGTGGGGTATTTTATTATTGTTTAGAGCGGTATATTATa gtaaattaaattttgatatgATAGGTAGTTCTGATTACTGAATGAAATAT ATCCGAGGAGAAAACAATGATCCAAAACAATTGTCCATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022149TCONS_00022149Clytia hemisphaericatranscript
TCONS_00022150TCONS_00022150Clytia hemisphaericatranscript
TCONS_00022151TCONS_00022151Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022149-proteinTCONS_00022149-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000406supercontigsc0000406:39913..46601 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.37 0.78 0.48 0.04 0.28 0.11 0.07 0.19 0.09 0.05 0.12 0.14 0.21 0.22 0.12 0.07 0.56 0.16 0.14 0 0.92 0.73 13.93 28.98 7.16 18.41 1.51 2.3 1.21 0.71