XLOC_012453 (gene) - C. hemisphaerica

Overview
NameXLOC_012453
Unique NameXLOC_012453
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000408:152661..159509+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012453 ID=XLOC_012453|Name=XLOC_012453|organism=Clytia hemisphaerica|type=gene|length=6849bp|location=Sequence derived from alignment at sc0000408:152661..159509+ (Clytia hemisphaerica)
aatatttaacacaaaaatatttagcacaaGATATTGTGAGTAGGTGTAAG ACGTAAGTTAGAACTTCTTGCTCCATCAAAACATTATTTGGCGTTACTTT TTCATTGGCCTAGTAAGGACCCCCCAGTAAGGTCTTGgagataaaaatta aaataggcCAAAGAAAGACTGACAAAGGTTTTTCTACATAGCTAGTAAGT TAGTAAGGTCTTGGAGACAAAAATGAATTTTGGTCGAGAGTATCAGACCA TTGCCCGACCCTTGCCAAGATTAAATATGGGCTTAATTTGGGCCGATAAG ATGTTATTGATGTGAAACAACCTTTTTCTATCTTTACAGCTTTTGAAAAG AGATGAATTTCCCATCCGAAGTACCTGGGCGACTCTGCTTCATTCTTTCA CGAAGAGTCAACAAGCTTATATGTTTTTATGCAGGTATTTATCGAATTTC ATTGTTATAATACCTTATCTTattttttacgccggcccttattggcgtta tttttgggcacatggcgtaataagggccggtgttaaaaggaccggcgtaa aaagggccaagattttgcaatttttatctaaaggTGGCGTTAATttattt tcgataattttttctcaatttaaaggattttaggtatgattcgcagacaa aaattatccattgttttactccatatctaAAACCTcacaaaaatcagtga tttttaAGAATGGAATTTTTAACAATATACTACCGAAacatgacatttta atgtaaattttaaacattatttactaatttgaagcataagtagccattta aaaattttttggcgTTTTTAACGGctctaattggcgtaagcccaaaatta gacTGTGGCATAATAAGGGCCgtcgtaaaaagggccgataaggtaggtaG AAGGCCTCAAAGgagaaattttcgcgaaattaagtaaAATATTAAATTGT ATTTTAACCTAGAAACTTAAACAAAATCTACACCACTCCAAACTTTCACT TAAAGAAGAGAACTACGTGTTAAAATGACATGAAACCAGTATTCTCACTC ATGATATTTATTTTAGACCACTTAGTTATGATCATTTGACATACTtaaat gggataaactttcgcggggacttaatctAGCGGATGAGCACTTCCCTGAT TTTTCGCGTAATTTCGCTGATCAGGATTacatctaatttttctaaagtga ttccaaattttgcaaaatcggGTTAGCAAACAGAAATTTTGACATGGTAG TgtgcaaaaattggaaaataacGAAGAGATTTGAGTAGTCTGATTTGCGG GACGAAAAAACGGCgatagaaatttcaaatttcaaattttcgcgggtact taatttcgcggatgaggcccttccaaatttccattgggatttaatttcgt ggattttcgcggatgacactcaaatttaatccccgcgaaagtttatccca tcaAAGTAATTAGATATTTTTCCCAAATACTCTAATCACATTATTCTAGG GGACAGACGAATTAAAGCTGTACGTGACGCGATAATAAAATGTTGGTCAA AaggtatcaaaaatgaaaaggtttTATCTCCAGAATGCTATCAATTCAAA TTGGAAGGTGACCCGTTCAATTACTTTGGAGATAACTCTTCCAACAAGAC AGAAGCGTGTAACCTTTACAGTGAAATCATCAATAGCTATTACAAACGTG GCTGGAAGGTATTTTCAATTTCACTTGCATTTATTTCTTTCCTAGCAAAC TATTTAAATTCATTCCAGATTATGCTTTAAAATATTAGCGGAATTAGTTA TAACATTTTTCTTGGAGTTTCTATCTCATATTTCTTTCATGAACAAGGTA CTTAAAAGACGTTCTAGACGCATATTTTCTGCAAGCAAGGGGATGCAATA TAGATTTTATAGGACCTATTCTCACTCGCATTTTTTGCACTTGATTGAAC TATTACGTCTAACTTGTGCTcaattttcccctttttcatttttcagttaA TTGTTGGTACAATCATGAGTCATCGCAACTTGGAAGACCCCATCCTTATC TTCAAGAAGATCATAAATCCTAGCAAGAACCCTTTACTTTCCATAGCCAT CGACCATTTCCACATACAGGTATAAATCACACATCATTGTTTCTTTGCGC ACTAccttaaagaaagaaataattcgaaaaaagaaaattcgatGGATTCG CCCAAACATAATCCTCTAActgctaaattaaattcccgccaaattctAGC CATCTGcaaatttccgccaaaatttcttccctaagaaagttttattatgt tttttaaAGCTCCTGTGAAATGTTTTGAGTCACAGATTTCGTTATTTGGT CCACAGGTTGGTTTTAGAGGAAAGAATACTTTTACTTCATTTGACTTTTG ACTTTCGTTTTAGCTGGATAACCTACCAACAGATCTTATACCAACTGTAA CGTACGTCGTTGAGAATCATCTCAATCATGAtatcaaaaagatcaaacag GACACAGACGGAACTGTCATTGTAAGAGATTCATGATGTCTAACTTGatg ttggaaaattttgaaaaataagttttgaataAGGTTCTATTCCTTCTGTT CCAACAAATAACTAAAGATTAGACAAATTTAAGGCTGTGATTTcaggaaa taataaaaataattttaagccCCTCTTTCTTATACCTGATTCAGCCAGTG AGATCTTTTTGATCCATGTAAGTTCACTGAGTGTGTGCTGGGTGGGTGTA CTGAGTGTGCTGGCTGGCATTAAACCCTTGAATCTTCCTCTTTACAGTAT AAATTAAAAGGAATGGTGGGCTTGCATGGTGAAGAAACCTGGCAATTCGT GCAAAAATTACATGAAATTCTCTATAACAACCATTACACAACATTCGGCC ACATTCCACTACGTGCTTATAAATGTTTCGACTTGTTATTCTTCCAACAT TCAACCACTATTCTTGGTATGTttgaaacttgatttttctttatatgaTT GACATATTAGGGGCATATTAGCTCTTTTGTACGTTTTATAccctttttat tagttttaatttttgtccTCTAGTGATTGATAGACTCATCCCGGTCAAAT CAACAAACATTTTACACTTGCGATCCCCATGATGGCTTTAAAAGCCTACT GAAATTATATGGATATaacatcacctcgggttaataaatctcaataacca actttgacctattgaatatctgcttattatttTCTCTTTAAGACCAAGAA CTCTTCACAATGTATCTTTTACATGGAGACACAATAGAATTAGAGAATTC AAATCACGTGATCAACAACGCCATGGTAGAAGTTATTTCAGAAGCCTGGA AAGGAGGTATACAAAAACAAAGTGAAGATGGCGCACGTTTCAAGTTGAAG TTGAAAGGATATCCTTTCTCTACTTTAAATGGTAAGTCTGAAGTTTGAAT GAGCTGGTCACATTTTAATCGTGAAAAAGTGATAGTGAAAAACCGCCAAC AGAAACCACGTGATCTTTAGGGAGCGATTACCGAGCGGTCAAGGCGTCAG CGCCATAAACCAGGGGCTCGCGGGCTCTGTGAAAGTCCTAGATTACAGGG CTCTTCGTGTAAAATATCGAACCGCCTTACTAACGAAATTCAGACAAATT CGTTAATTTTGGAGAAGTAAATTACGAAAttcttcttcttgtttttcAGA AATGGAATGTTTAGCTACGGATTCATTATTCGCCAATATTCTTGAACAAT TAGTGTCTGTCGGATATTCTATAGACTGTTCATTCACGCAAATCAAGTTC GATAAACGCATTATCTTCAAAAGACAAAAGCCAGTTCATAGAGCGANCCA GGCTCTGTGAAAGACTGTATAAAAATCCTATATTACAGGGCTCttcacgt aaaatatcgaaCCGCCTTACTAACGAAATTCAGACAAATTCGTTAATTTT GGAgaagtaaattttgaaattcttcttCTGGTTTTTCAGATATGGAATGT TTAGCTACAGATTCATTATTCGCCAATATTCTTGAACAATTAGTGGCTGT CGGATATTCTATAGACTGTTCATTCACGCAAATCAAGTTCGATAAAcgca ttattttcaaaagacaaaagCCAGTTCACAGAGCGAAGTTTATGTGTTTA AATACGAAATTTCATTGTGTGCGATTGGTCAATGCCCCAGATGAAATTAA AGAGGTAATACAAAATATTAAATATCcaataaaaatttattgaaaatttt gggTATTTAAGAATTTAAAAATTCGAATGAAAACTTTTCACAACCTCGAC TGCAAAACACTGACCAGATGGAGTTAATTATATTTTGAAACATATTTTGA AGAGCCTCTAAGTAAAGGCTATTTGATTCAACGCAGTATTTTCTTGTTTG ATAGGCTACTGAGGCAATGGTCAAAGAAATGAAACTTGATATGAAGAAAA TCAAACGAGACGCACCCGGCTGCTCACTCGATGTTAGTACCGATAGATTT TCTCTTCACTCTTGATATTAGTCTGCAGTCCGTTCAACCCCAGCTGGATT ATTGtcattttccaatgtttctcttttttcaaaggcaaaagaaaattaaa ggaaggaaaagttttgaaatcccTAACAGGTAAAAATACTCAGGTAAGTT ACCTGAAAAttacaataattttttaaggccattagccggcagaaaatgag gaAACCAATGATTTACTGCGAAGgataccatgatgaagtttcgctgtagg ggtgttacctaattgtttacgcccttattttcgcgaaaaaccacaaaaac taaaaaatgctgtcatcagcaaaacttgtttttttaaatatctccagttt ggctaatggtaaaaacatgaaatttggaccaacgttgaatatcattaaaa ggatcattttgcaaaaataaatttttcagatAAATAATAATTGAACAGAG AAACACAGATGTGATCAACGTTTCATCAAGTAGGAAATATAGATATCTTT TCCCCATTGGCATTTAGCTCTTTCGTTTTTGTGATAAAGAGTTCTCTCtg cccagccggcacacaacgtcaaaacaacgtctatttgacattcataacgt ccaaataacgttatttgaacgttaaaacaacgtacAGCCAGGGGTGTACG aattatttctttatttcttatGAAGATGCGATTCAAGAACAGAGGAATAT GGGAACAACTTGAAGGACACGACACCTATGTTGCTCGTTCTCTCCTCGTT GCTTTACTTGGTAAATACACAGATCTGCAATACCAATTTATTTTATCTGC TGACTTGACGGAAAAACAAGGAGAGGGAAGTAGTAGTTGGTTTTTCATGT ATGATAATGAACAAGTGACTGCTAAACATCAGTTGAAAGTGGAAAGTCAA AGCCGTTCACCAAGTCCTAATAGACATTCAGCGCACAATAGCCCGCGTCA TAGTCCGCGCtcacatcatcatcatcaccgGTCACGTAGCCCTCGTCAAA GTCCACGTGTTCAAAGAACAATTCATAATGGTAACACAGATGCGATAAAA CCCTTCTCAGGTTCTGAAAGACATTTGCTACCACCGGCATTAGTTTCTGA ACCTCCACCGAGTTATGAAGAAGCGACTAAGAATTGTTGATGTGATATTT TTTGAATGATTCCTATTCGTGCTCTAATTTCGTAATTTGAACTTCcagta tttgaaattttataataCAAAGTGAAATGTGGGCCCCCTCAGGTTCTAAG TCTTAAAACGACTCCCCGTACCAAATTCTTTTCCAACCCAAAGAGATAAC TTGATCTCTTGAAGAGTTGTAATCAGAGAGACAGAGTGGAAAATATGAAT AAGCTCCCTTTGTATTTCCTAACTGATGACCAATACACGAGAAGAGGTCG CCCTGCCAAGTCTTTGTTGGATCAAGTTGTTGGTCATAAAATGATTTCTA TTAGTCAATTTTGTTCTCTTGCCTTANNACCAACCATTTGATTTGAAAGA ATGACCCTCTCGTCTGAAGGTCCATATTTTGTAtgtttttagaaataatt ttgTTGTTACACATATACATACACGCACAGACAATTTATTTGAATGGAct attttgatttcaattcGATCAAATCATAGATATTTATACATAGTGGGCag cacccctccaacccccacctgaataaagtcacccccacctgcatagggta acccccacctgaaaaatgctaccgacccaacccccaccttctTGGACCAC CCCCACCTAAATTCTGAAAAgattccaacccccacctgaaaaaagtcacc cccacctgcatagggtaacccccacctgaaaaatgctaccgacccaaccc ccaccttctTGGACCACCCCCACCTAAATTCTGAAAAgattccaaccccc acctgaaaaaggtttttaactgttttaacaattttgagggtaagcaAGGT TAATcacttgaaaataatttctatgCTTTTTATACTTCATACATCTTTTG TTATATTATTAGACTTGGGAAGAaatagatttttactgtcaatgTATATG TTTATGATGAGCAGGgttgaaagaaagtttttgagtcaaaataagaaaac tagtaaataaactctccaacccccacctgaaaaaagtcacccccacctgT ATAGGGTAACCCCCACCTAAGATTTGAGAGCAGGCTAACCCCCACctgct taaatttttctgaaaacctccaaccccccccctaaaGTTAGGGGGGGTTC CCACTATGTTATATCAGTACGtctatttatcatttttcttaacTTCGTAC CATTGATTAATTTGTAGATATTAGAGATTTTTTACGAGGAAGATAATCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022206TCONS_00022206Clytia hemisphaericatranscript
TCONS_00022207TCONS_00022207Clytia hemisphaericatranscript
TCONS_00022208TCONS_00022208Clytia hemisphaericatranscript
TCONS_00022209TCONS_00022209Clytia hemisphaericatranscript
TCONS_00022210TCONS_00022210Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022207-proteinTCONS_00022207-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000408supercontigsc0000408:152661..159509 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.81 11.38 13.07 13.81 3.81 3.43 2.53 3.56 1.41 3 3.23 2.12 12.6 9.28 7.14 5.99 15.92 26.15 6.11 9.26 4.42 5.13 11.74 11.11 11.34 9.88 10.47 9.55 29.35 26.12