XLOC_013356 (gene) - C. hemisphaerica

Overview
NameXLOC_013356
Unique NameXLOC_013356
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000461:232277..237836-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_013356 ID=XLOC_013356|Name=XLOC_013356|organism=Clytia hemisphaerica|type=gene|length=5560bp|location=Sequence derived from alignment at sc0000461:232277..237836- (Clytia hemisphaerica)
GGTAAATATTCATCTTAAAAAAAAATTATGGCAGAAAATTCACTCAATAA CATCAACATTATCAGACAAATTCAAGGTATGTTAATATTATTTAAATTCT AACTGTCTTTTTAACTTTTCACAATGTTTTAAAAAATATACAGTTTGAAA ATTGTTCTGCTTACCACACTACCTTATTAATTAGATGGAGCTAAAATTTT ATACATCTTTTTTTTTGCATTACAAACTATATTTGAAAACTACATATTTG CATTTTCAATTCTTTTTTTTAAAAGTCGTTAATTTTTTGCAGGAATTGAA TTTATGAATGATCAAATTGTATGTTGATTTAGCAAGACACAGAAAAGCAA AAATCTGTTCTTACAAATATTTGGCAATTAATTTTAAAGATTATCTTTAA AACTAGGAATGTACAACGACTGTATTATTATATCTTCTAGATTTAGTTTA AAACTCCTCCAAGAAACACCAGCCTGCTTTCCAGACTGGCTCTGGAGAAT GTCAAAACTAAAAGTATTCAATTTATTTGGAATTTAGGTCAAGTATCAAG TCTTGATGAGTGCAAAACCAAAGAAGATATTTCAAACCATTGTCAAAGTC TAATGAAGTCTTTAGAAACAGTTCAAAATGTTATCAACACAAAGAATGAG GGTCAACTACAAATTTTACATGAAACTGGATTAAAACTATGGAATTTAGT GGTAGCAAAGAAACTAAATAAGCTAGTTGAGCGTGTTGCAATTGCTCAGG GTATGTTTATTTGATTTCACCAAGCATTTTAAAGACTTCTTTAAAAGTAA TAAAACGTAAATCAGGGTTTAAAAAATGAAAAAATCTTTTCAAAGAAGCT GTAAATTGCAAAGTTCTATATTTTTACAAAGTTGTGTTTATGAAGGGTAT ACTTTTTCAGCAAGTTGTTTTGCAGTTGTTTAACTATTAATTCAAAACCT CACTTTTTTCCAATTTTTGTTCCTTTTCCACTTCAGCTAGATATGTTGCA CTTCAGTTGACGTACATGGTCGCCCTGGGTGAACATTCAAAGACAACTTC CAGGAAACAACAAACAGTATTAAATTATTGATATCCAACATAATTCGCTT TATCCTAAATAAATTCTAGTAAGAGATATACTTAAACCTCCTTAGCCAAC AATTTGAAACTTACGCCATTAGTAGAACATTGTAATGACTTCAACATTTC AATGATACTGCCCAGGCGAAATCGTACAAATTACATATTTTTGATATTTG GGTTTGGTTGAAGGTTATAGTATAGGTTATATTTTACGAGTTTCAAAATC AATTTACCATTTATAGTATCTACAACACATGTCACTATGCTAAATGTAAG ATACAAGTATTGTGTATGATTTATTCTTTTGTTATTAGATGGCAATGAAA GTTGGAAAAGATTGGTTAGGTAAAATCTGTTCTCCTTATTATTTTTCAAA GATTTGAGTTTGCTCTAGTGGAAATGGTTTAAGGAAATTCTTTTTCAGAT TTTCTGATAAATATCATCTAAAAATACCTACATAAAGACTTTTATTCACA TGATCCCTTGAATGGGTCTGATGTCTGGTGTCTGGTGTCTGGTGTAATTT TTTCAATCTTGAACAATTTTTATATAACTTTCTTTTTTAGTTGTAGATTG CTCAAGCAGCACCAGTTAAGAAAAGATTCAGAATTGATAGACCAAAAGAG TTAATAGTTTCTAGATCTTTCTAGTGATTTTTGAAGTTAAGCTGTCTCAT TTTGTCATTTGTGTTAGATGGCTAGTATTTAGCATTAAAAAATCTTTGCC TTTTATTTTTAGAATGTGGCAATAGTTCTTATTCAGAAGCTTGTTTTATC ATCAGCACAGAAGTTAGTATCTTTTAAATGGAGATCGTTAGAATTATTTA GTTCTGGTTAGAAACACTTCCACCATAAGATATCTTAGTTTTGGTCAGAT TACTACTACATTCTGCCAAATGAAAGGTGCTTTTGGAAAGAAATTTCATT TGCTCTTATCATTACAGTTTATCCATATTGGAAATGAAGAGCTAGCATTT CCAAACAGTGTTTTGTTCAATCTTGAAGCAATGCAGTATATTGTAGATTT TGTATCAATGAATTAAGTTTATTTATTGTTTCTTCCAAATATTTTTTAAT CAGACGAAATTTTGATATTCTCCTTTTTGCAGTGCTACATCAAGCTAATG AAATTGTTGGAAAATGGCGAATCTGAAACACATTTGAGTATTACTGAAGA ACAAATTAAACAATGTCATGCACAAATGATGCAAGTCTTCTTGTTCAGGG CAGAGTTGGTAAGGAAACTTCCGATATTTTTTAAGAAAAATACAGATATC AGCAGAAAAATAACTTTTTCTCTACTTTTGATCCCATTTTCATGTTCACT TTTTGTGCTTAATCTACTGGGCGAAGAGTTTCTTCATTCAAAAGATTTTA AAAATCTACATACTTGTAAAAGGGGTGTATGAAAAAAAATTATCACCTGT TCAGTCTAGTACATAGCAACCTAAAAAGTCATGATCTCCTCATTACTTTT TAAGGTGAGTTATGGCCCTTTTTTCCTGGATTTTAATGATATTTTTCCGT CTTTTTTGGTCTGGCAGTAGAGTTCCAAGCCAAATGCACAACCTTTCCTA GGCAGGCAAATGTGAAGTCTTAACCCTATTCGTCCTAGAGGGGGCTGTTT CTGTTCGGGGGCAAAACTAATGTTAATAACTCCTGAAATAATAGAGCTTT TGGCATGAAATTTTCTGTAAATTCCTAACTTTTATTCAGCTTCAAACTAA AAAAAAAATTGACGCCTAAAAATTTTCACACCTTGAGCATGATAACATTT CTGACAGTAAGGTGTCACAAAAATCGACACATAATTCCAATACAAATTTA ATTTTTATTTCAAATATATCGTTTAAACCGTAATTTTATTGAATATTTAG GATAAAATAAGCATTTTAGAATCAGGGAACTTTTTTCTAAAGCCTTTGTT GAATACAATAGCTATTTATAAGCACAAAAGACATTTTCGGTTTTTACTCA CTTTGGGCATGATGAGTGACGTCATCAAAAAAATTTTTTGTCAAAAGTTA CTTTACATGACAAGAATCTTGTGTGCTAAATTTCATCGAAAAAGACCCAC TAAATCAAAAGTTAAGGAGTGGTACAGGAAAAATCCCCCCTAGTTTTGAA CCGCCCCTAAAAACCTAGTATGAATAGGGTTAAGACTTGCGTGCAAATTC GAATTACAGATTGAATCTATCATCTGTTTTTTTGCATTTTATATTTTTTG AATACCTGCAGTAAATTTTACTTTCAATCCAGCATTTGCATGAAAATCCT GCAACTTCTGTAGGAAATGAGTAGCTTCTATCTAATCCTACATAGATTCG TCTCTAGTCTTATTTATTTGCCTCAAAAGCTCTTTTAACTTGGTAGAGTA TTTATTTTATCGAATTTCCTCATTGAGTACGGTAACTTGCCTATGAGAAA CTTTTACAGAATCTTTTTAATGATTAAGATGAGTTACTACACAGCGTTTG ATCACAGGAAAATTGTTCCATAAAAGTTATCTTCTTTCATTTCATAGGCT TTACGAAATAGTCAACATGCTACTGCAATGGACTTTGCAAACAAAGCCAA AGAACTTGTTTTCAAAGAACAGTTAAAGGTACCAAAGCATACATTATTTA GATTTTAAGATAGAAAAAGATATCTTATAAGCGTCCTCTTAACTCATCAA GTGCTACTGATGTTTGTCCACTTCAATTATTCCTTTTTTTACGGTAATCT ATGCAATTCTTGTAATTTCTAACAAATGGATAGTTTTATTAATCTAAGTT CAAGATCTGTATCTACATTTTAGCCAGTATAGAAAATGTTTTCTAATTTT CAAACTTTCATTATATTTTCAATTTTTTTCAGGCTGATTCTTTGTGTACA GCTTCATACAACTTTGGTTTGGAATGCTATCAGAAAGAACTCTATAATTA TAGCAAAGAATGGCTAAAGTAAGATTTGTCCCTCATTCATCAAAATCTTC TCTAAAATTTTCACCTAGCCTTGGGTCCACTTAAGGCTTGATAGACTGGA TGGCGCGATCAAGTGGCCTGTAGTATGTGGACTGTGAAAACAGTCCGTCA GATTTGAGTTGTTTTTAAAAGGTAAAAAAAGAATGAAGCAAGGTTTTCAT TGAAATGTTATCTATCTCTTATTCCTTTTTTACACATCTTTGTCTACTTT ATACGGACAAAAAAGCTTTTAAAATTATTGGCTGTGATGTGTTTAAATTA TGTTATGTGGGGTTTTGTTCTAACACTTGAAGATAAGGTGTTTTAATCTT TGACAGTATTGGTTACTTTAATCGTAGAAATCTTAGCGAAACTAATTTTA GCGTAAATTAGCGAGTCAGGAAAATCTTGATTTTTTTGGGATTTATTTTA GCGAATCACGATTTCAAAAAATTTCGCGTGGATAAATTTTAGCGAATATT CGTATCAAATTATCGACTGAATTCGTTTACTTTCATTTCTTTGCACTGAA ACCCTTCCTATTGATAAAAATGTATCAAGGCAATATAACCAGAAATTTCT CGCTGATAAATTTTAGCGATCTGTCGATTCGGCGTGTTTGAGCGAGATTT ATTTTAGCGAAAATAGGGAAAACTCGCTAAAACGCGCCGAATTAGTCTTG CTAAAATTTCTACGATTAAAGTATTATTAATTGCAAAGGCACAGGTTTCT TAAGGTTCTTTTTAGTTTATTAAGAGTGTAATTTTCATGTTTTTAACATT TATAGACAGTCCATTGAAATTGGGAAAGAAACGCCAACTGTCAAAAGCGA ACAACAGGTAAAGTCAAAAGTTAAAAAAGTATGATTACGATATTTGAGTA ATATGTAACTAGGATTTAGATAATAATTCATTTTTGATTTGTTTCTAAGT AAGAGTTTGTGACAGAATATAGGACAATCAGAACAAAAGGAGACTCCAAA GAGGGTAGTCGAGCTAAAAACAACAACAACATTTTCGCCGTCTGAAAATA TTGTTATCAAATTCTAGCCCTTCAGCCAGGGAGGCTTTGTCCCGGCTTTG TCTAAAGATTTTTTTTGAGTGCCCCCCTCCCGTTTAACACGACAGGATCA AAGTCCTACATTTACTAAAAAAAGACAAAAAGAAAGACTAATTTCGCCGT CCACAACCCCGACCTGGTTAGTTTGTCCACCCCTACGAATTCACCATATT TGTTTATCACGGGAATTATCTACATATGGTTTAAAGAACGACAAATAACG CATGTGTGTTACACGAATGCAGGATTCTTTAGAGGAACAGACTGACTACA CTCAACGGCTTGCAAGACCTGAGCAATAAGCAAAAAGGGATCGAGGGGTA AAGAAATAGGATTTAATGATTGATATTTCACTGTTGATCTGACTGATTAT CTACCAGATATCTTTATTTCATGTTAGGCTTCGTCACGTCAACTGCTTGC TCTTGTGTATGTAGAACTGAAGGGTGATGATAATTATGCAAACGCTTTAA ATGTCATTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00023771TCONS_00023771Clytia hemisphaericatranscript
TCONS_00023770TCONS_00023770Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00023770-proteinTCONS_00023770-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000461supercontigsc0000461:232277..237836 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.5 3.63 0.78 0.47 3.97 2.82 3.09 3.19 2.27 2.49 1.86 2.06 1.49 1.74 1.59 2.69 3.01 3.2 0.85 1.72 3.26 4.16 1.77 1.79 27.07 29.41 0.55 0.34 1.02 0.78