XLOC_026642 (gene) - C. hemisphaerica

Overview
NameXLOC_026642
Unique NameXLOC_026642
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0003737:5149..10538+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_026642 ID=XLOC_026642|Name=XLOC_026642|organism=Clytia hemisphaerica|type=gene|length=5390bp|location=Sequence derived from alignment at sc0003737:5149..10538+ (Clytia hemisphaerica)
ATTTGATCGTTTATGGAACGCCCGCGGAAGAAGGGGGCGGTGGAAAGTGT TTGATGATCGAGAAAGGCGTTTTTAATGAAGTAGACATTTGCATGATGAC CCACCCATCGCCTTACGAATTACCAAGCCCCTCTTCACTTGGTGTCGCCC AATACAAAATCGTTTTCAAAGGTAAGGTTCTGTTGAATGAAAACATGGAT AAAAGAAGATTTACAGATACAATTTTATTACGGATCATCTGATAATGACT CATGAAAATTCTTGTATTGATCATGATCTTTAAATTTTATTTGGAAGCCG AATTATAATGAAAATGCAAAAAAACTTGGTGTTGGTTTTGAAGATGACCA TATGAGAGAAACATATGGCCGAAGCACTCATTTGTGGGAAAATTGAATTC ACAAGGGATTGAAAGTCTCTCGAACGCAAGATTATACGTTATAACCTTTC TCATTTCACATTTTCTCTCTCCTCAGGCAAAACAGCACACGCAGCAGCGG CGCCATGGGAAGGAATCAACGCATTAGATGCCGCTGTAGCATGTTATAAT AACGTTAGCATGTTACGACAACAAATGAAACCAACTAATCGTATTCATTG CACTATTGTGGATGGAGGAGAAAGACCCAATATCATCCCTGAACGCGCGG AATTGTTCTATTTCGTTCGCGCGCAAACTGATAAAGAAGTTACAGGTTTA GTCGAACGACTCAGAGCGTGTGCTGAAGGAGCAGCCCAGGCTACAGGTTT GAATTTATCTTTTAATCCCCCTGAAAAGTTTTATCGATAGAATTAACCTT TCCTATTCGTGTTTTTTGATTTCTAATTTCAGTTCAGCTCAATTTTGACA ATACTTGAGTGTTTGTTTGTCTATCTGTCCGCCTGTCTGGAGCAATGTGA AAGTAAATAATGATTTTTGGGCAATGACGACgagtttttcaacatttaaa atTTGGAATAGTGTGGAGATTTTAAATAATGTCagattttttccttaaaa aatacctaaaattttgaatttgaatgccAAAAAATGGTTTTTAGTTTTAG AAATTATAGAAATTATTGTTCAGAGGAAAGTTCTCTCTCTAAATTTTCAC AGGCTGTACAATGGACATGAAGCAAAGTGCGCCCTCTTGGTCTGCTGTCA ACACAAATCAAGTCATGATCGATCTTTACATCGAAAATGCAAAATCGCTT GGCGTTCCTTTTGAAGACGACCATATGAGAGAAACATTCCAAGCGGCAAC AGATATGGGAAACGTTTCAGTTGTAAAACCGTCCATTCATCCTTATTACA AAATACAAACAGAAGAGATAAACCACAACCATGGATTTACAAAAGCCGCT GGATCTGCAGAAAGTCAGTTACCAACATTGAATACTGCAAAGAGTATGGC AATGACCGTTATTGATATCGTTTGTGAGGAAGGACTTTTACAAAAGGTTC AGAAAGGTTTTAAAGAATCTTTACTTTCGTGATGGAATATAACGAACATG TGATTGCTAAGCTTCCAAAAACACAGATATTCAGTtgtctctctctaatt caatcttcaagggacaaacaaagaaagaattttctcaattagggaaagat tcgaattacagagagtatttaATACGATTTTTCAGTTGAGGGGGCTAATA GTTTAGttcgaattactttttcaaatgaGAGAGAGTTTACTGTTCACTGT ATCTATTTGTCATGTTTTTGTCCACTTGTAATAGTAAACTTGTAAATTTT TAACTTGCATTTTTTCACACATCCAATTTCATACACCACTCACGGgtaat ttatgaattttctatcatataaaaagcgacaaaagtaatatttttgcaac gttttttaataaaataaatcttttaattttcgaaaaattattatTGTTGT ACTAAAATTTGTAATTTGTTTGAATGTGAAAGAATAGTACATTAAcacta aatttcaattttacagCAAATTTAGCTCTTATTGATTGGcttaaatttat ttgaaaacttttataaGAAAGCTTCAATGTTATCTTGTCCGTTTTTNAGA TTGGcttaaatttatttgaaaatttttataagaaagctTCAATGTTATCT TTgcccgtttttttttttcagggtagaaaatgaaagaaaaattgaaacag atcATTTGCGAAGCCATAGACTCCAAGAAAGATGAACTAAACAATATCAG TcaagaaatttggaaaaatcctgagttgaatttcaaagaatttAAAGCGC ATGCTTTGCTGACGTCATATCTCGAGAAAGAAGGGTTTGAAGTATCAAAG AGCACTCCTTTGGAAACTTCATTTATTGCTCGTTATGGTAAAAAAGAAGG AATCAAAGTTGGAGTGATTTGTGAATATGATGCATTACCTGGAGTTGGAC ATGCTTGCGGTCATAATTTGATCGCTGAAGCAGGAATCGGAGCAGCTTTA GGTAGGGAATACAGGTTCAACAATACCATATTCAAATAACTGAtcagaaa agtttgaaaacatCTTTTCACCCACCATTCAAAGTTATGATCACCAGGGT AACTAGTAAATGTTTGGGAAAAGAGGTGACGATACAGCCTTAAAGCCATG AAGTATGTCTTAAAAGTATGTGAACACTTtaccttttcaacattttctAA GCACCCACTCATGCTATGTTAAAAAGGTATGTACAGTTGGAAAGGTATTT TTGAGGAGAATGCTATAATATAATAAAGAATtcggaaaaaagaaaattaa atgaaaatttttctactGGTTTAACATTCACAAAAGAGCACTTTTTAGAA TATTTAAACCTTTCTGATTCCAAAACTCAATTCAGATTTTTGGTATGATA CTTACTTTGGACCAAAGTTGGGTATAATGGTCAAAACTCATCCgaaatag caaaaaaaacctAGTTTTTGTGCCATTTTATCAAACCagtagaaaatata ttttctttttacttttatttttcttcttcactgtcaatttttcaagaaat tttaatcaaTGGATTGTGAATTGATAAGCTGATGAATATTCTTTATATCT TTTTCCCTACTCCAGGATTGAAATCAGTGATTGATTCAAAACCTGATTGC AATTTCCACTTGATCGTTTATGGCACGCCAGCGGAAGAAGGGGgcggtgg aaaatgtttgatgaTCGAAAAAGGCGTTTTTGATGAAGCAGATATTTGCA TGATGAGTCATCCTGCGCCATATGAAATTCCGAGCCCTTCTTGGCTTGGT GTTGCCCAATACAGAATCGTTTTCAAAGGTAGCATTTTTTTATGGTAATA AAtatctattttttatataaaactaAACTTAGGCCTACAGCTTAAGTGCC AATCGTCCATAAATGTATTTTTATCCGATTAGTACTAAAATGACGAATAA TTTACAATACTAACTAATGACTGGGCAATAACATTTGAATTTTTCTGCAC GTGTAAATACGTGATAATACATTAGAATATCTCATTCTTACGAAGAAAAT CTTCCAaatctatatttttatattttacttaTAATTAATGTATTCTTTTC TCTCCTCAGGCAAAACAGCACACGCAGCAGCGGCGCCATGGGAAGGAATG AACGCATTAGATGCCGCTGTAGCATGTTATAATAACGTTAGCATGTTACG ACAACAAATGAAACCAACTAATCGTATTCATTGCACTATTGTGGATGGAG GAGAAAGACCAAATATCATTCCTGAACGCGCcgaaatgttttattttgtt cgCGCGCAAACTGATAAAGAAGTCGCGAGTATGGTCGAACGACTCAGAGC GTGCGCTGAAGGAGCAGCCCAGTCTACAGGTTAGAAATTTCTCTCTTACT TGATGAACCAGCTTTTGTAGATTTCACTGCTATAATCTGTATGATCAAGC AACTTCCCAGGGGCTANCAGGTTAGAAATTTCTCTCTTACTTGATGAACC AGCTTTTGTAGATTTCACTGCTATAATCTGTATGATCAAGCAACTTCCCA GGGGCTACTTTGACACAATTGatgtcgggtatgtgcgtgccatACGGGTC CTATTTTTaaaccctcgaaagtctctcaaaaggTAGAAGAATCGagtctg aaagggtcccaaacttacgaaatctaaaaattggaaaaaatagtctctca aagggttgcAAAATGTCGAAATTCAGTAGTCTCTCAAAtggtcgattttc gaactttgacTCGGActtacccgtcacctcgcaaacctagtagcTCCCCC CGGGGCAGCTTAAAATGTTGTGTGTTTATGGTCCGTCTTTAGAAGTAGTT ATCCTGTAGACAGATTGAAGTGTTTATGAATTTTCATAGGCTGTACTATG GAGATGTTTGAATCAAGTCCTTACTTCGCTGCTGTCAATACAAATCAAGT CATGATCGATCTTTACATCGAAAACGCAAAATCACTTGGCGTTCCTTTTG AAGATGATAGCATGAGAGACATATTGCAAGCTTCGACAGATATGGGAAAT GTATCAGCAATGAAACCATCTATACACCCTATATATAAAATAAAATCGGA AGAAACAAACCATAACCATGGCTTTACAAAAGCCGCTGGATCTGCGGAAA GTCAGTTACCCACATTGAATTCAGCAAAGAGTATGGCAATGACCGCTATT GATATCGTTTGCGAGGAAGGACTTTCAGAAAAGGTTCAGAAAAGCTTCGA AGATTCCTTACTGTAGGCTCATTGAAATGGAACAGTTGATTTACAATTTG TGGGTATTGGTGTATTAGGTTTTACAGGAATATCTTTTAACCTTGTTTCA CATTTNTTTAGAAAAGGTTCAGAAAAGCTTCGAAGATTCCTTACTGTAGG CTCATTGAAATGGAACAGTTGATTTACAATTTGTGGGTATTGGTGTATTA GGTTTTATAGGAATATCTTTTAACCTTGTTTCACATTCATATATTACATT TCTGAAGTATTGTCTAAAAAAATGGTCTCgaataaaataataaatgatTA AAGTAATACTGCGTTGGAAAGATAGTTCCAACTGAggcttttcttttaaa ttgtaTTGTACAAGGTTTCCTTTAGCCAGGGTTTCCTTTAATGTATTAAA ATGTGACCATTGCCATTTTTGGCTGGAACAGACTTTGACTAAATcttctt tctatttattttttcccacaTTCCATTTACAATTTGTAAACAGCATACAC AACAGCAGTCACAAAGAAATGTCCATAATCAATCGTTAACTCTGTAAAAT CGTCATTTTCTTTATCCATCAAAGTTCTACTGGCAATCGAAGTTCCTTGA TGTAAATTTTGACCTACGTGAACCATCGAGACGATCCGATAACGACTGAA TCCAAGATGTTTGACTTTCTCTTTGATGGAATTACTTGCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00042856TCONS_00042856Clytia hemisphaericatranscript
TCONS_00042857TCONS_00042857Clytia hemisphaericatranscript
TCONS_00042858TCONS_00042858Clytia hemisphaericatranscript
TCONS_00042859TCONS_00042859Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00042859-proteinTCONS_00042859-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0003737supercontigsc0003737:5149..10538 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PM20D2peptidase M20 domain-containing protein 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
61.41 64.7 78.53 77.48 6.15 5.18 22.46 25.49 40.15 29.98 27.55 34.2 31.56 32.74 45.85 57.29 29.14 30.71 22.73 20.72 31.93 31.36 42.61 39.54 28.05 27.72 20.48 16.63 29.87 25.04