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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027479 ID=TCONS_00027479|Name=TCONS_00027479|organism=Clytia hemisphaerica|type=transcript|length=1544bp
ATCTCCATACAGACTTTCCAGgtCATCAGTTTGACGAAGTTACGTAAAGA
GTACAAAACGTACACATTAAAACGACAGTTGATCTCTTCATATAATATCT
TCTTATGTGAAGAAAAGATTTACCATCTGGTCTGTAAATCTCTCGGAAAA
GAATGCTACAAACACAAGAAGGAGCCTGTACCAGTCAGGACGGTAAACAA
AGATCTGAAGAAGGAGATCGAGAAATGTCTTTCGAGCACCATGCTTAGAG
TTGGACATGGACCAAGCAGTTCCATTTTGGTGGGTCAATTGAATGAGCAC
AAGGAAAAACAAATGGTTGAAAATTTGTTGCATGCCATGCGAATCGTCGG
TCAGAAGGTACCAGGCAAGTGGAACAACATCAAATCTATGTATCTCAAAA
CATCGACTTCAGTTGCTCTTCCTTTGTACCAAGCGTCACCCGTTGCAACC
CACGATCTTAGTGACGTCAAAGTCGACGTCGAAGAGAAGCAACGCAAGCG
TAAACGTAAAGCGACGCCGTCCATCAAAAATACCAACCTCGATGAAGTTA
AGAGCGATGATGAAGGACAAAATGAGGACCAGAATGATAAAACGGAAGAC
GTTGTATTGGACGGTGAGAAGGAAAAAGAAGTCACTACATTGGCAAATGA
AGACATCGAAGAAACTAATCCTGCTGTCGAGGAACAGAAGACAGTTGTTG
CCAAAAACGAAAAACATCTGAGATCTTCCAAAGTCAAGAAAGCGAAAgtc
gaagaagaaaaagaagtagGAAAACTCGTCAAAAAGAGAAAGGTGAAGAA
AGTTACTACACTatcagaagaagaagaaatcgaGAGTGTTCCGAAAACAA
AAAAGACACCCAAGAAAACACTACCTGCCAAAAAGACTGGCCCAAGGAAA
GTCAAATCTAAGTAGACACTATATTAAGAATAGCAGTGGACGATATTTTT
ATTATGTAGCCTGATATAGCATATGATCGTACTTTTTCAGCCTCAGACTT
TCCTTCTAATACAATAAGAGAGCaatccattgagtttcaagcccgaaggg
ctagaggcgagactcctggatgggaaatgaaaccacttatttcctatcca
gaacgcccgcgcgtagtttttacacaaacgccggattgaaactaaaatcc
atcgttaaatttcaaaaatgtagtcctccaaaacaaaggaaccgctaaat
gcaatccgtcgtcatgattacggagcgttctatgcgcgttttggatggga
aataagaagcttcaatttctcttgccttgGAAAGGTTAAAGTTTTGCCTC
TAGCCCTtggggcttgaaactcaatggagaAACcctaaatttgcaatttt
tctacagtGTAATAATAGGCTTATTTCACTTTTTGTAGAAGAtgagattt
tatcaaaaattttatcatatttatgGGAtctgtattttttaaaaatgaag
aagtagTTCTATTGTCTCGTCATAGTAATATGGTTTGAATGTTTACTTTC
TTGCTATACTGTTTATGGGTGTTCTCACACCCGAGGAGAGGGCA Run BLAST on NCBI protein sequence of TCONS_00027479-protein >TCONS_00027479-protein ID=TCONS_00027479-protein|Name=TCONS_00027479-protein|organism=Clytia hemisphaerica|type=polypeptide|length=304bp
ISIQTFQVISLTKLRKEYKTYTLKRQLISSYNIFLCEEKIYHLVCKSLGK
ECYKHKKEPVPVRTVNKDLKKEIEKCLSSTMLRVGHGPSSSILVGQLNEH
KEKQMVENLLHAMRIVGQKVPGKWNNIKSMYLKTSTSVALPLYQASPVAT
HDLSDVKVDVEEKQRKRKRKATPSIKNTNLDEVKSDDEGQNEDQNDKTED
VVLDGEKEKEVTTLANEDIEETNPAVEEQKTVVAKNEKHLRSSKVKKAKV
EEEKEVGKLVKKRKVKKVTTLSEEEEIESVPKTKKTPKKTLPAKKTGPRK
VKSK Run BLAST on NCBI transcript from alignment at sc0000630:5981..13569+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027479 ID=TCONS_00027479|Name=TCONS_00027479|organism=Clytia hemisphaerica|type=transcript|length=7589bp|location=Sequence derived from alignment at sc0000630:5981..13569+ (Clytia hemisphaerica)
ATCTCCATACAGACTTTCCAGGTAACTTTTTAAGAAGGCTGAATTGCGAA
ATTTTTTCCACGCAAAAATGAAACCACATGAGGTTACCAGAGGTCAGGAA
TCATGGAGTTGTGTTTTGACTTGATTTCAGGCCAAAAACCATACCTTTCA
TTAACCCAATAAATACTGGAACAAAATCATTCTTGAAATGTCAAAATAGC
ATCATAGTAGGCAAGGTTTATCTCAAAATATGCTTGGTCATATGTACAGT
ATTATCGTTTTTCGCGAAAGAGGTTTTCTACTAAGACCTAGGAAACTTTT
TAGAGctcaaaaattgatttataaGGCAAAATCCCTTgacgaaatttaaa
aatcatcaaaatctgAAACCAGTTACTTTAATGAGATAAATTTTCGTGAc
gattaaatttcgcagattttgcggattttggtgtcatccgcgaaattaaa
gcccatggaaatttttaaggtCTAATCCGCGAAATCTTTTGAGCAAAACT
CAAGTGATCTCAAATAACTACTTTTAGAATGTCAACTTTTATCAAATAAG
CGCTAATTATGCGTATTTCAACATCTAGCATGTACAATTTGGCAGTATAA
AGTGCAAGTgcaaaatcataaattttgtcTCATgatgccatccgcgaaat
taagtcccttTCTCCAGATAGGTCGAGAAATCTCAACCTACTATTTATCG
AGCTATGTTTTGCAAATTTGATCCTTAAAAAGCTTGTAAACGCTCGATGT
GTTTCGGAACTCACATCGTGAGCTCACTTGTCTGCATGAATAACGATGAT
TCTATGGCCCCCTTGGTGGATCCATCCATTTTGCTCAAATGAGCAATCTC
CCTTGGTGGATCCATCCATTTTGCTCAAATGAGCAATCTCCCTCGGTGGA
ACCATCAATATTTTGTTCGGATGTCTGCATGAATAACGATGATTCTATGG
TCCCCTTGGTGGATCCATCCATTTTGCTCAAATGAGCAATCTCCCTTGGT
GGAACCATCAATATTTTGTTCGGATGTCTGCATGAATAACGATGATTCTA
TGGTCCCCTTGGTGGATCCATCCATTTTGCTGAAATGAGCAATCTCCCTT
GGTGGAACCATCAATATTTTGTTCGGATGTCTGCATGATTACCGATGATT
CTATGGTCCCCTTGGAGGATCCATCCATTTTGCTCAAATGAGCAATCTCC
CTTGGTGGAACCATCAATATTTTGTTCaaaccactttcactttcgttttc
aggtCATCAGTTTGACGAAGTTACGTAAAGAGTACAAAACGTACACATTA
AAACGACAGTTGATCTCTTCATATAATATCTTCTTATGTGAAGAAAAGAT
TTACCATCTGGTCTGTAAATCTCTCGGAAAAGAATGCTACAAACACAAGA
AGTATGATGTCTACTTTTCCCTTTTCAATGTTTTCTATAGAGCGTACAAA
TTTCTTTCAGGATTTGTTCCTGGGTCTTCCATGGCACAAAGCATTGTGTT
TATTTTCAAAGTGGTAGATCCAAGCTAGCGGTTTTCATAGAAAAGGCTTA
TACACGCAGCCGAGGGAGGCTCCCCCGAGCGGGTAGGGGTGCTGAGGTAA
AGCAGGCTACGAGTGTACGTGCAAGCTGTAAGGACACCTTTTTAGACCTT
TGTTTCGTTCGACGAGCGAGTgtataaaatattcttattagaAAGCCAAA
TCAGATAGACCAACGTGCGGGATGTTTCTGAAGGGAAGTGAGTTGGTCTA
ATGTAATTTTTCGAATTATCAAGTGCAATTTTATTCATCGAAGAATATTT
TATTCATTGAAACATCTGATAACTGTTCatcaaataataaataattaatA
AACAAATGAAGAAAGTATGCGCGCTGGCGCTGTGACCAACTCACTTCAGT
CCAGAAACATCCCGCACGTTGGTCTATCTGATCTGGCTTTCTGAATATTG
ACATTAAAAAACAGCCATACTCTACAGTAGCATTCATTTCTTTTTGGAAT
GACCAAagttgtcttctttttttcttggacAGGGAGCCTGAACCAGTTAT
GTAgtcattcatttttggaatgaccaaaattgtcttctttttttcttgga
cagggagcctgtaccagttatgtagtcatttctttttggaatgaccaaaa
ttgtcttctttttttcttgaacagGGAGCCTGCACCAGTTATGTAGTCAT
TTCTTTTTGGAATGACCaaaattgtcttctttttttcttggacAGGGAGC
CTGTACCGGTTATGTAgtcattcatttttggaatgaccaaaattgtcttc
tttttttcttggacagggagcctgtaccagttatgtagtcatttcttttt
ggaatgcccaaaattgtcttctttttttcttggacagggagcctgtacca
gttatggagtcatttctttttggaatgcccaaaattgtcttctttttttc
ttggacagggagcctgtaccagttatggagtcatttctttttggaatgcc
caaaattgtcttctttttttcttggacagggagcctgtaccagttatgga
gtcatttctttttggaatgcccaaaattgtcttctttttttcttggacag
ggagcctgtaccagttatggagtcatttctttttggaatgcccaaaattg
tcttctttttttcttggacagggagcctgtaccagttatggagtcatttc
tttttggaatgcccaaaattgtcttctttttttcttggacagggagcctg
taccagttatggagtcatttctttttggaatgcccaaaattgtcttcttt
ttttcttggacagggagcctgtaccagttatggagtcatttctttttgga
atgcccaaaattgtcttctttttttcttggacagggagcctgtaccagtt
atggagtcatttctttttggaatgcccaaaattgtcttctttttttcttg
gacagggagcctgtaccagttatggagtcatttctttttggaatgcccaa
aattgtcttctttttttcttggacagggagcctgtaccagttatggagtc
atttctttttggaatgcccaaaattgtcttctttttttcttggacaggga
gcctgtaccagttatggagtcatttctttttggaatgcccaaaattgtct
tctttttttcttggacagggagcctgtaccagttatggagtcatttcttt
ttggaatgcccaaaattgtcttctttttttcttggacagggagcctgtac
cagttatggagtcatttctttttggaatgcccaaaattgtcttctttttt
tcttggacagggagcctgtaccagttatggagtcatttctttttggaatg
cccaaaattgtcttctttttttcttggacagggagcctgtaccagttatg
gagtcatttctttttggaatgcccaaaattgtcttctttttttcttggac
agggagcctgtaccagttatggagtcatttctttttggaatgcccaaaat
tgtcttctttttttcttggacagggagcctgtaccagttatggagtcatt
tctttttggaatgcccaaaattgtcttctttttttcttggacagggagcc
tgtaccagttatggagtcatttctttttggaatgcccaaaattgtcttct
ttttttcttggacagggagcctgtaccagttatggagtcatttctttttg
gaatgcccaaaattgtcttcttttttcttgaacagggagcctgtaccagt
tatgtagtcatttctttttggaatgaccaaaattgtcttcttttttcttg
aacAGGGAGCCTGTACCAGTCAGGACGGTAAACAAAGATCTGAAGAAGGA
GATCGAGAAATGTCTTTCGAGCACCATGCTTAGAGTTGGACATGGACCAA
GCAGGTACGTTGTAATGACACATTTTTAACGTTACTCTTGAAATAATAat
acctcgttgaaaagatcATATCCGAAAATAAACTTTTGGATTGGTGGATA
ATTCAAGTCAGTGGTATATAcggggtgtcccgaaaaaaagtatcgagtcg
taccacttctatagaaagaaagttatCGTGtctgtttcactaaatttgca
atgtttatcaaagtttctctttgTGTCAAATtaatcttttatgaataact
tttataaaaaacaattctcaataaatttaaacgtcatgaaaattgtaaag
aaagttaattaatggagtctgctaaatcgcgtgccacgcgtgccttcgtg
ccttggcgtgccttcgtgccttggcgtgccagcgtgccaacgtgccttgg
cgtgccatccaaatttggcgtgccaacgtgcctgcgtgccttcgtgcatt
ggcgtgccagcgtgcccaCGTGctttggcgtgccaacgtgccttggcgtg
ccatccaaatttggcgtgccaacgtgcctgcgtgccttcgtgcattggcg
tgccagcgtgcccaCGTGctttggcgtgccaacgtgccttggcgtgccat
ccaaatttggcGTTCTATtaaaatttcggcgtgccatccgaatttttgCG
TGCCATCCGAATCTCGGCGTGCTTGTGCTATCCgaatttttaccgaaatt
tgGGTAAAACTTTGGGGAGAAGATGACATAACTTGGACCCCccccattat
ggaccccatTGTGGACCCCACTatggaccccctcaaaattAGCGGGGAAG
CATTTTCAAGGTTATTTTATGTAAtaacacttaaattatgtaaataaaat
GGCATTATCGCAAAATATGATGTgtatacaccaatttacaaCAAGATGTT
TTCTCATGCTCAGTAGGATGCTGGCGGTGCAAATGGATATAGATTGTCat
gcaatgaaaacattaaatgctccaagagagctgttttagagatatgaaaa
tagtagtacttttattattattttcatttttataagaacatttacataaa
tttaaaagttttgaaggaGATACACGTGTTTCTTCCACGCAAAAGGCAGT
AGTCTAcatgtcattttcttgacaaagtgacactttttgacaaaattatt
gaCATGGCAATTATTTGGGATACCTGCAagctttattacaccaaatattt
caattgtaccgaatgagatgcctttgatTTATATAGATAAATATTGGGGT
AAAGTAATTTTCAGAAGCCTAACAATTAATGTTTAAGGGCAAAATATAAA
Ctctggaaatttaaaaaagtacgccaaaatttggatggcacgccggaata
aggatggcacgccggaataaggatggcacgccaaaatttggacgGCGCGC
CGGATTTTGgatggcacgttggcacgccgaagcacgaaggcacgcatggc
acgctggcacgttggcacgcttaAAAACCGATGGCACgcgtggcacgcga
tttagcagactctgattaatgactgttgtaaaaacaattattgtggcaat
aaaattcaaatttcttacattttgttaaacacacgcaacaaccttctact
cagaatcatgttcgaactcgatactttttttcgggacaccctgtagtagA
CTACCCGTGCACAACAGATAGTGTGTAGTGATTATATAATCGCTTTCGCC
TTTTCACACGCgtgatttttttgcaaattacCACGCGTGTGATGTGCACG
TGAATCATAAACTTCACAATCACGAAATTTTAACACGCTTCAACACGCGT
GTGATttggacaagctggagtttttacaagctcttatttcatttggttgg
tcgttaagatgtaataaaagaatcttattactttttctaaagaacgcgtc
atctctatcactttaaatgaccaattagtgaagtatcttgtgaAAACTCC
AGCTCACCCCTTGTGATTTGGTTTTTCTTTTGGTGTAAAAGATCTGAGAA
GTGTGATCTGGTGTGACCACGTGTTATCATAGAAAGTGACGTCATTGGCT
ACCATGGCAACCAATATAAAAGTTTGAAAGTTTGGAAAAAATTTACACCA
ATCGAAAGACCACGAAAAACTAAAATGGTGATAataatgacgtcaatttt
aaaaagtgcttgaaatttGAGGCCTGTTTTTTGCGGCACAACAGTCTTCA
CTGATAACTGTCAATACTTTATCAGAATCTTTTTTTTAGCATGTTTTATG
ATCTGAGTATACAATTCAAAAGTTTACTTTTAATTACCTCAAGcggggaa
ctaatttttgctttttaaacAATCTTTAATANTTTTAATTACCTCAAGcg
gggaactaatttttgctttaaacaatctttaatatttttgtttttgtttt
cgtttttgtttCAGTTCCATTTTGGTGGGTCAATTGAATGAGCACAAGGA
AAAACAAATGGTTGAAAATTTGTTGCATGCCATGCGAATCGTCGGTCAGA
AGGTACCAGGCAAGTGGAACAACATCAAATCTATGTATCTCAAAACATCG
ACTTCAGTTGCTCTTCCTTTGTACCAAGCGTCACCCGTTGCAACCCACGA
TCTTAGTGACGTCAAAGTCGACGTCGAAGAGAAGCAACGCAAGCGTAAAC
GTAAAGCGACGCCGTCCATCAAAAATACCAACCTCGATGAAGTTAAGAGC
GATGATGAAGGACAAAATGAGGACCAGAATGATAAAACGGAAGACGTTGT
ATTGGACGGTGAGAAGGAAAAAGAAGTCACTACATTGGCAAATGAAGACA
TCGAAGAAACTAATCCTGCTGTCGAGGAACAGAAGACAGTTGTTGCCAAA
AACGAAAAACATCTGAGATCTTCCAAAGTCAAGAAAGCGAAAgtcgaaga
agaaaaagaagtagGAAAACTCGTCAAAAAGAGAAAGGTGAAGAAAGTTA
CTACACTatcagaagaagaagaaatcgaGAGTGTTCCGAAAACAAAAAAG
ACACCCAAGAAAACACTACCTGCCAAAAAGACTGGCCCAAGGAAAGTCAA
ATCTAAGTAGACACTATATTAAGAATAGCAGTGGACGATATTTTTATTAT
GTAGCCTGATATAGCATATGATCGTACTTTTTCAGCCTCAGACTTTCCTT
CTAATACAATAAGAGAGCaatccattgagtttcaagcccgaagggctaga
ggcgagactcctggatgggaaatgaaaccacttatttcctatccagaacg
cccgcgcgtagtttttacacaaacgccggattgaaactaaaatccatcgt
taaatttcaaaaatgtagtcctccaaaacaaaggaaccgctaaatgcaat
ccgtcgtcatgattacggagcgttctatgcgcgttttggatgggaaataa
gaagcttcaatttctcttgccttgGAAAGGTTAAAGTTTTGCCTCTAGCC
CTtggggcttgaaactcaatggagaAACcctaaatttgcaatttttctac
agtGTAATAATAGGCTTATTTCACTTTTTGTAGAAGAtgagattttatca
aaaattttatcatatttatgGGAtctgtattttttaaaaatgaagaagta
gTTCTATTGTCTCGTCATAGTAATATGGTTTGAATGTTTACTTTCTTGCT
ATACTGTTTATGGGTGTTCTCACACCCGAGGAGAGGGCA Coding sequence (CDS) from alignment at sc0000630:5981..13569+ >TCONS_00027479 ID=TCONS_00027479|Name=TCONS_00027479|organism=Clytia hemisphaerica|type=CDS|length=3660bp|location=Sequence derived from alignment at sc0000630:5981..13569+ (Clytia hemisphaerica)
ATCTCCATACAGACTTTCCAGgtCATCAGTTTGACGAAGTTACGTAAAGA
GTACAAAACGTACACATTAAAACGACAGTTGATCTCTTCATATAATATCT
TCTTATGTGAAGAAAAGATTTACCATCTGGTCTGTAAATCTCTCGGAAAA
GAATGCTACAAACACAAGAAGGAGCCTGTACCAGTCAGGACGGTAAACAA
AGATCTGAAGAAGGAGATCGAGAAATGTCTTTCGAGCACCATGCTTAGAG
TTGGACATGGACCAAGCAGTTCCATTTTGGTGGGTCAATTGAATGAGCAC
AAGGAAAAACAAATGGTTGAAAATTTGTTGCATGCCATGCGAATCGTCGG
TCAGAAGGTACCAGGCAAGTGGAACAACATCAAATCTATGTATCTCAAAA
CATCGACTTCAGTTGCTCTTCCTTTGTACCAAGCGTCACCCGTTGCAACC
CACGATCTTAGTGACGTCAAAGTCGACGTCGAAGAGAAGCAACGCAAGCG
TAAACGTAAAGCGACGCCGTCCATCAAAAATACCAACCTCGATGAAGTTA
AGAGCGATGATGAAGGACAAAATGAGGACCAGAATGATAAAACGGAAGAC
GTTGTATTGGACGGTGAGAAGGAAAAAGAAGTCACTACATTGGCAAATGA
AGACATCGAAGAAACTAATCCTGCTGTCGAGGAACAGAAGACAGTTGTTG
CCAAAAACGAAAAACATCTGAGATCTTCCAAAGTCAAGAAAGCGAAAgtc
gaagaagaaaaagaagtagGAAAACTCGTCAAAAAGAGAAAGGTGAAGAA
AGTTACTACACTatcagaagaagaagaaatcgaGAGTGTTCCGAAAACAA
AAAAGACACCCAAGAAAACACTACCTGCCAAAAAGACTGGCCCAAGGAAA
GTCAAATCTAAGTAGATCTCCATACAGACTTTCCAGgtCATCAGTTTGAC
GAAGTTACGTAAAGAGTACAAAACGTACACATTAAAACGACAGTTGATCT
CTTCATATAATATCTTCTTATGTGAAGAAAAGATTTACCATCTGGTCTGT
AAATCTCTCGGAAAAGAATGCTACAAACACAAGAAGGAGCCTGTACCAGT
CAGGACGGTAAACAAAGATCTGAAGAAGGAGATCGAGAAATGTCTTTCGA
GCACCATGCTTAGAGTTGGACATGGACCAAGCAGTTCCATTTTGGTGGGT
CAATTGAATGAGCACAAGGAAAAACAAATGGTTGAAAATTTGTTGCATGC
CATGCGAATCGTCGGTCAGAAGGTACCAGGCAAGTGGAACAACATCAAAT
CTATGTATCTCAAAACATCGACTTCAGTTGCTCTTCCTTTGTACCAAGCG
TCACCCGTTGCAACCCACGATCTTAGTGACGTCAAAGTCGACGTCGAAGA
GAAGCAACGCAAGCGTAAACGTAAAGCGACGCCGTCCATCAAAAATACCA
ACCTCGATGAAGTTAAGAGCGATGATGAAGGACAAAATGAGGACCAGAAT
GATAAAACGGAAGACGTTGTATTGGACGGTGAGAAGGAAAAAGAAGTCAC
TACATTGGCAAATGAAGACATCGAAGAAACTAATCCTGCTGTCGAGGAAC
AGAAGACAGTTGTTGCCAAAAACGAAAAACATCTGAGATCTTCCAAAGTC
AAGAAAGCGAAAgtcgaagaagaaaaagaagtagGAAAACTCGTCAAAAA
GAGAAAGGTGAAGAAAGTTACTACACTatcagaagaagaagaaatcgaGA
GTGTTCCGAAAACAAAAAAGACACCCAAGAAAACACTACCTGCCAAAAAG
ACTGGCCCAAGGAAAGTCAAATCTAAGTAGATCTCCATACAGACTTTCCA
GgtCATCAGTTTGACGAAGTTACGTAAAGAGTACAAAACGTACACATTAA
AACGACAGTTGATCTCTTCATATAATATCTTCTTATGTGAAGAAAAGATT
TACCATCTGGTCTGTAAATCTCTCGGAAAAGAATGCTACAAACACAAGAA
GGAGCCTGTACCAGTCAGGACGGTAAACAAAGATCTGAAGAAGGAGATCG
AGAAATGTCTTTCGAGCACCATGCTTAGAGTTGGACATGGACCAAGCAGT
TCCATTTTGGTGGGTCAATTGAATGAGCACAAGGAAAAACAAATGGTTGA
AAATTTGTTGCATGCCATGCGAATCGTCGGTCAGAAGGTACCAGGCAAGT
GGAACAACATCAAATCTATGTATCTCAAAACATCGACTTCAGTTGCTCTT
CCTTTGTACCAAGCGTCACCCGTTGCAACCCACGATCTTAGTGACGTCAA
AGTCGACGTCGAAGAGAAGCAACGCAAGCGTAAACGTAAAGCGACGCCGT
CCATCAAAAATACCAACCTCGATGAAGTTAAGAGCGATGATGAAGGACAA
AATGAGGACCAGAATGATAAAACGGAAGACGTTGTATTGGACGGTGAGAA
GGAAAAAGAAGTCACTACATTGGCAAATGAAGACATCGAAGAAACTAATC
CTGCTGTCGAGGAACAGAAGACAGTTGTTGCCAAAAACGAAAAACATCTG
AGATCTTCCAAAGTCAAGAAAGCGAAAgtcgaagaagaaaaagaagtagG
AAAACTCGTCAAAAAGAGAAAGGTGAAGAAAGTTACTACACTatcagaag
aagaagaaatcgaGAGTGTTCCGAAAACAAAAAAGACACCCAAGAAAACA
CTACCTGCCAAAAAGACTGGCCCAAGGAAAGTCAAATCTAAGTAGATCTC
CATACAGACTTTCCAGgtCATCAGTTTGACGAAGTTACGTAAAGAGTACA
AAACGTACACATTAAAACGACAGTTGATCTCTTCATATAATATCTTCTTA
TGTGAAGAAAAGATTTACCATCTGGTCTGTAAATCTCTCGGAAAAGAATG
CTACAAACACAAGAAGGAGCCTGTACCAGTCAGGACGGTAAACAAAGATC
TGAAGAAGGAGATCGAGAAATGTCTTTCGAGCACCATGCTTAGAGTTGGA
CATGGACCAAGCAGTTCCATTTTGGTGGGTCAATTGAATGAGCACAAGGA
AAAACAAATGGTTGAAAATTTGTTGCATGCCATGCGAATCGTCGGTCAGA
AGGTACCAGGCAAGTGGAACAACATCAAATCTATGTATCTCAAAACATCG
ACTTCAGTTGCTCTTCCTTTGTACCAAGCGTCACCCGTTGCAACCCACGA
TCTTAGTGACGTCAAAGTCGACGTCGAAGAGAAGCAACGCAAGCGTAAAC
GTAAAGCGACGCCGTCCATCAAAAATACCAACCTCGATGAAGTTAAGAGC
GATGATGAAGGACAAAATGAGGACCAGAATGATAAAACGGAAGACGTTGT
ATTGGACGGTGAGAAGGAAAAAGAAGTCACTACATTGGCAAATGAAGACA
TCGAAGAAACTAATCCTGCTGTCGAGGAACAGAAGACAGTTGTTGCCAAA
AACGAAAAACATCTGAGATCTTCCAAAGTCAAGAAAGCGAAAgtcgaaga
agaaaaagaagtagGAAAACTCGTCAAAAAGAGAAAGGTGAAGAAAGTTA
CTACACTatcagaagaagaagaaatcgaGAGTGTTCCGAAAACAAAAAAG
ACACCCAAGAAAACACTACCTGCCAAAAAGACTGGCCCAAGGAAAGTCAA
ATCTAAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027479-exon-sc0000630-1491911889:5981..6001 | TCONS_00027479-exon-sc0000630-1491911889:5981..6001 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1510915933:5981..6001 | TCONS_00027479-exon-sc0000630-1510915933:5981..6001 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1575043694:5981..6001 | TCONS_00027479-exon-sc0000630-1575043694:5981..6001 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1491911889:7233..7381 | TCONS_00027479-exon-sc0000630-1491911889:7233..7381 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1510915933:7233..7381 | TCONS_00027479-exon-sc0000630-1510915933:7233..7381 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1575043694:7233..7381 | TCONS_00027479-exon-sc0000630-1575043694:7233..7381 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1491911889:9786..9884 | TCONS_00027479-exon-sc0000630-1491911889:9786..9884 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1510915933:9786..9884 | TCONS_00027479-exon-sc0000630-1510915933:9786..9884 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1575043694:9786..9884 | TCONS_00027479-exon-sc0000630-1575043694:9786..9884 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1491911889:12295..13569 | TCONS_00027479-exon-sc0000630-1491911889:12295..13569 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1510915933:12295..13569 | TCONS_00027479-exon-sc0000630-1510915933:12295..13569 | Clytia hemisphaerica | exon |
| TCONS_00027479-exon-sc0000630-1575043694:12295..13569 | TCONS_00027479-exon-sc0000630-1575043694:12295..13569 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000630 | supercontig | sc0000630:5981..13569 + |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00027479 vs. Swiss-Prot (Human)
Match: RL1D1 (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens GN=RSL1D1 PE=1 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 6.565e-24 Identity = 50/140 (35.71%), Postives = 89/140 (63.57%), Query Frame = 1
Query: 19 QVISLTKLRKEYKTYTLKRQLISSYNIFLCEEKIYHLVCKSLGKECYKHKKEPVPVRTVNKDLKKEIEKCLSSTMLRVG-HGPSSSILVGQLNEHKEKQMVENLLHAMRIVGQKVPGKWNNIKSMYLKTSTSVALPLYQA 435
Q+ISL L+KEYK+Y K +L+SS++ FL + +I L+ +G+ Y+ KK PV V ++K+L +EI C+ T+L + G S+I +G + E ++EN++ + + +K+P KW ++K +++KT S ALP++ +
Sbjct: 128 QIISLQTLKKEYKSYEAKLRLLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQIE-HIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSS 266
The following BLAST results are available for this feature:
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