XLOC_016549 (gene) - C. hemisphaerica

Overview
NameXLOC_016549
Unique NameXLOC_016549
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000724:22402..30498-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_016549 ID=XLOC_016549|Name=XLOC_016549|organism=Clytia hemisphaerica|type=gene|length=8097bp|location=Sequence derived from alignment at sc0000724:22402..30498- (Clytia hemisphaerica)
TGTCATCATAACACAGTGTCACCTTATATCAGTACTCCCACTGGAGAGAA TATCACGCTCATGAGTGACATAGGATTTCGACAACCGTTCTCCAGTGTTG ACGAAATTATCTGTATTGGGAGTTCGCTAAGTTCTTGATAGTTTCATGGC GCTTCCGCGCCAATCATCTTCCCTTTACCTTCCTTTGTTTGAGACAAAAT TATTTCTTCAAAGCTACATCTACCATTTTCAGAAAATTGGCTTTTGATAT TTTACCGAACAAAAAAGTCTGTAAAATGCTTCTTTTCAATCAGGCGCAAG GTTTATAAATTTACTGACAAGCGAAAAACGGAAAGTTGAGTCTCGTAGAA ATTAGCATTCGGTAGAATACAGCGAGAATAACAAATTCAAAATAAACAAC TTTGAGGAGCCTTTTCGAAATTTAGTTGGGCAGAGGTAATACAACTATAA ATTATATCAGACTTTATCTGGCCAAGTGAAAGTTATGCATTTGTTTGACT GTTGCAGAATGTCTCTGCAGTCCATTGTAAATACTTTATAGCAAATATTT TGGAGTGAAAAGATGAATAGTTGAGTTATTTTTAACTTTCCAAAAGGGTT TATCTCCAGTAGAAATCATGACTAGCAGAAACTAGATTTGCTATTCCCAG CTCTCTGAGAACATCTTGAATGAGAAAAGCAACTGAGATAGATTCCACCA TTGCTTCTGCTTTTGGAAATTAATCTAGAATGAGAAGCTATCAAACAGTA GAGAGTACAAATAATGTTAGGCAATGTTAACTGAACCTTCTTAAACTAAT TTTGGTAATTGAACCTGAAAGATCTTGATTTATTTGATTACAGTAGGTTT CTTACCATCTGATGCATTCAATAGATTCTATGATTATTTAATAGTTGTGA TAGGAATCACTTTCAAAATTCACAATCGGAACCAAGGATAGTTCAGTGAC TTAGGGTGGTTGAATGGTTTCTGTTATAGATAGATGACCCATTAGACATT AGATTACTCTATTACTGAAGTCAGAAACCCAGACGTCCTCGCTCGATAGG ATCGATCATCGGAACGGCTCGATGACGGATCAATATGTGATTGATTGATG GATTACTTAACGATCTGGATAGGAGATCGATTAAAGATCAATACTCAAGA TTTTTTAAGCTCATGATTAGTTATCGACTATTTATCAATCTATCATCGAT CTTTTATTGATCTTATCGACCCTATCGACTCATAATTGATTTACGATCGA TAACAAATCGATTAACGATCGATGACGAATCGGTTAACGATCGATGACAA ATCGATATACTGGATTGAAATACTAGAATAATCGATACTCAAGACTTTTT AATGGCTGAATCTTCAATCGATCTCCTATCCGGATCGTTAAGTAATCCAT TGATCACATATCGATCCGTCATCGAGCCGTTCCGATGATCGATCCTATCG AGCGCGGACGTCTGGAGAAACAAACACATCAAACCTCAATGGAACACTCT AAAAAATTTTTGACTTCAATCCATCAAAACAAAAACTAAAAATTTTAAAA TGAGTACCAAATGTACAACAAGAAATGACTGTAAAATTGAAAATTGACGT TAAAAAGCTAGAAAAAAAGTAGAAAAGGTAGCGCTTAACTTATGCGGGTC TAGGAGGACCAATCTGTGTAAAAGTCATATACCGAAACCACAGCGTGGGA AATTATTATATATATTATTATTATCATTATATTATATTGGGCTATTCCAG GGGTATTATGTATGGATAACAAACTAACCCCTCGAAATTAGGAGTCGACA CCTCTGGAAAGTGAAATTTTGTGGAAAAGGGCCTGGAAAGTGACTATTGA TGCCACTGTAGGAGAAGAGAAACCCCTGGAAACCTTGGAAAATCTGAAAA TGACGAAAAATCCCTTGGAAAATCAAGGTTTAGAACCCCCTGGAAAAGTT CGTCAATACCCCTGTGCGGTTTAAAAATGGAATAGCCCATTATTATTATT AGTTTATTTAGTTGCAGGTTAAAAAAAGGCAGTACAAGACTGATGTGGAC CTACTAAAAAAGAATAAGTAGACTATAGATATATGAAGAAATCTGCAAAT ACAAGTATATAAGAAGTATATTGGACTTACGAAAGAGCATTGGTTTTGAG CTTACAAGGATTATATAAAAAAAAAAAAAAATAATAAAGTTAAAATCAAT ATGTGAGTGGCCCCTAGTGATGTAACTTCTGCAAGTCTGCAGGGTCATAT CCTTTTTCATGACATGAATTGAGTTTGCATATGAAAACTTTTGTGTTACA TAGATTCTGCAGTCATAATGTCGTAATCTTCAAAATAACTGAACCCCATT TGCAACTGTTGAACATCTAATTTGATTTTTATTTTCCTTGTAGCCATGGC ACCAACAGAAATTTCAGTTGGCCTTAACAAGGGGCACAAAGTCACCAAGA ATGCCCCAAAGACCAAAGTTAGCAGAACTAAAGGGGTAAGACATTTCAGT TAATTTTTTATTTTGTTCAACAGGGGAATGAATGAACCCTGAAAAGGGGT GGGTAGCATTTCTAATTCTTGATATTCATGATGTAATCTTTTGGTTGATT GACACTCTGAATAAAAACATTTTTCTTCCATTATTGGTGGCAAAACAAAT GCGTTCCCCAATGTTTTCCAAGCAAGGACCCCCGGAAAAAATAAGAAAAG ATTAATACGGAAGTCCAAATCAAAGAAAAAACTTTCATTGAAATTCTTTA AATATCTACAATAAATTTCCACAAGATATTAAGCTTTCTTTTTCGTAAAC CCCCGGTTTCAAATAGGTTAGCTTACGTCAAACCTTTTGTTTAGGCGCAA AGATTACATCATGAATATCATGAATAGTTTAAGATGGATGTTATGTGGCA GATCACAATCTGTTGTCCCTGAATCAATGAAATATGCTGTTATTTGAGGC TTCAACTATTTCGTATAATCAGAATGATGATTCAAAACTTTCGTTCTTCT GAAATGGTTAGGAAGACAACAAATTGAGTCTGACTGATTTAATTCAACAT TCTACTTCTAATTTTGACTACATGTTTTTTTATAAGGAAATCATTAAATA AGGAATTTGAGACTGAAAATGGTCTGAAAAAATAAAGAATTTTTAAGGAG CTACTCAGGCTAAGATTTATTTATTTATTTTGCAAGTTTTTAGACAAAAT TTATGAGATTTAGAAACCAAGTTAAGGTTCCTTATTTATGAAAAACGTGC AAAGTCTGTGTCGATATAATCTGTAGCAGGGAGAAGAAAAACTGTAATTT TGAAATTTGAATTAAATAGCAGTTTTGTGAAAGTATTTAAGGCGCTGTGG TACAGTGGTCATTACCTTGGCTGCTGCACAGGCGACTGAGGTTCGATTCC CACTTGCAGCAGTTCACTTGGTAAGTGAACGAACCTTCGCCTGGGTCAGC CCATGTCATGTGAGGGGAATAAGGTAGTCGTCCAAGATGCTCATTGAAAG CATATCGTCGCATCAAAATAAGAAAGCCTTAAGTCCATTTTTTCAAAAAT TGAGTTATGACCATACCGATGCTTTACACCCCATTTTTTATCGAATTTTT GGCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTAGCCCAACATGGTCAAAAATGGCAGCCATTTC AAACCTTTAAACTTGATTTTCTCAAAACTACAAAAATGGACTTAAGGCTT TCTTATTTTGATGCGACGATATATAGTTGCGAAAATAGGCCTCAAAGCCT CCTGCAACTCAACCAAATAGAAATATTCAAAAAGTGAAAGATGGGGAAGA AGCTCCAGGCTCTTAACCCTTCCTTTTGGTCTATAGACATTACCACCAGT GACCCCTACTGGGAATTTGCCTATAAGATTCAAACATAATTAAAAAAAAT TTAACAAAAGATGTTGATCAGTACAGAATCCAAATAAAAGAATGTTGAAA ACACAGTTGATTAGCTTAGGTTTTGAAACTATTGTTTTATTTTTAAACCT CAGTGTGCAAATGAAGAAATTGCCCTTTTTCTTTTTCCTAGGCATTAACA AAGAGTCTATTTATAATGGAATAGCCCAATATTGTAGTTGCTTTAAGAGA ATCTGTTGATGATGACTAGCAGAAGCTAGATTTGCTAATCCCAGCTCTCT GAGAATATCTTGAATGAGTAAAGCAACTGAAATGGATTTCTCTATTTTTC AACTGTTGAATTGTATGATATTCATAACTTGAGGTTTTAAAGAAGTCAGT CTAGAATTTGACTTTAATCAGATTAAGAACGTCCTTTAAAGTGGAATAGC CCAATATGGGGGGGGGTTGCAGGGGTTCGAAATACCGTTTTCCCGTCAAA ATTTTTGCTGAATCCCGAAAATTGGAAAAATATTAACACCGTCACACCGG CTTGTACAGGGCAAAAATGTACCTAAATACCGCCACCGTCTGATTTTAGA GTGCCATTTTCCCGTCTCTTTTTTTGTCAAATCCCGTAATACCGTACTAA AAAAGAAAAGGGCCAATCCCGTCACACCGTAAAAGTACAAACCCCCCCCC CCCACAATATTGTATTTGCTTTTAGAGAATCTGTTGATGATGACTAGCAG AAGCTAGATTTGCTAATCCCAGCTCTCTGAGAATATCTTGAATGAGTAAA GCAACTGAGATGGATTTCTCTATTTTTCAACTGTTGAATTGTAATGATAT TCATAACTTAAGATTTTAAAGAAGTCAGTCTAGAATTTGACTTCAATCAG ATTAAGAACGTCCTTTAAAATGGAATAGTCCAATATTGTATTTGCTTTTA GAGAATCTGTTAATGATGACTAGCAGAAGCTAGATTTGCTAATCCCAGCT CTCTGAGAATATCTTGAATGAGAAAAGCAACTGAGATGGATTTCTCTATT TATCAACTGTTGAATTGTATGATTTTCATAAATTGAGGTTTAAGGAGTTA CTTTAATGGGATAAACTTTCGCGGGGATTAAATTTCGCGGTTGGGCCTAT CCGCAAAATTCAAAAATTTCGCGGGGACTTAATTTCGCGGGTGGCACTAT TGGGTGTCAATATTTTCACGATTTTGTGACTTTCNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACGAT TTTGTGACTTTCACTGTCAAATCATACATGTTGGTTGTTGAAATACACAT TATTTGCGCCTCTTTGATGCAAGTAACCATTCGAAAAGTATTTATTTGAT ATACTTTGAGTTTTGTTTAGAAATATTTCGCGGATGAGGCCCTTCCAAAT TTCCACTGGGACTTAATTTCGTGGATGACACCCAAATCCGCGAAATCAGC GAAATTTAATCCCCGCGAAAGTTTATCCCATTAAAGTAATCTAGAATTTG ACCTGAATCGGGTTAAATGTTCTGGATTTAATTTTGCAAAGAAGCTTTTG CCTGAAAGCAGCTAAAATTAGCCATATTTTACAACAAATGGAGACTTTAG ACTGGTTTCTCAGCAGAGAATGAGATTTGAAAAATTTTGTGGTAAATTTA ATTTTGCAAGATAGGCATCTCACGTGGTTATTCAAGTTGAAAATTTTGCA GAAAAAGGCAAGAACTTGCGAAATCATGAAATTTAATCTCACGAAAGTTA ATCAGATTTTAAAGTAATAGTTATTGCACGGTAGACTCATTCACTGTTTT TAAAATGGTAGTTACAGCACTGTTCTTCGTCGCAAAATTAGGTATTTCTG CTTCATTTCTAAAGCTTTCTATATTCTGTCTCTTTGATATAGATATTCTA CTCGTGAATATCTTTTCAACAAGCAGAAGCTGATCTATCTTTCTCTTTTG AATTGTTCTCAAGAGCTCAAAACTGCTATTTGATTCGAGTTCTATCAAAA GCTACCTCCCCTGCAGGTTACATGATTGAGTCATTGGAAATGATGAATCA AAATACTTTCGTTCTTCTGAAAATGTAAGGAAGAAATTTTACGATTCTGA TTCAAAGCATATGTTAAAAATGAAATTTGATATGGTTTTCTTTTCTCGAA CTCAGAGAAATCTATGAGGATTGAATTTGAGGCATTCCCAGGTCTTAAAG TACCAATATGGCTGGTTCATTAAAACAGTTTTTGGGACCATTATACTGTA ACCATTCAAGACAAGGTACCTGGACTAGAAAATAAAAATCTAGGAAATCA TTGCTTGCTAAGGTCTACAAGGACTATGAATTTGTCTATCGTAAGCAAAA AGAGTCCATAAAGTTTTCTGCGCCAACTAGAAACTGTTGATGAACTTTTC CAAACATTTTTGTTTCAGATAGGTACGCAAAACTTATCCCAAAATATTTA TTTTTATTTTCGAAAGGTTCTTAGCAAACGTGTAAAGTTTGTCCGTGATG TTGTCCAAGAAGTCTGTGGTCTTGCACCATATGAAAAACGTGCCATTGAA TTGTTGAAGGTCAACAAGGATAAGCGTGCCTTGAAATTCGTCAAGAAGAG GGTAAGTCAAAATTTCTACACATTTAGTTTAATCCTAGCTGATACTGGAT ATTTGATAAACTTTTTTTGACTGATCTCAGGGCACATTCGCTGCAAAATA CGATTATACTCGTAGTAGAGGGAGAACTTTTTAAGTTTGCATTGATTCAT GATATTCATGACGTAATGTTATCTACGGAAAGACCCCGGTTTTTGCCAGT AGTGGCACATTTTACATAATTCTGTCTAGTTTATATTTGCCACTACTGGC TAAAACCGGGTTCTTTCCGTTGAAAACATCACGTCATTCATGAATATCAT GAATAGACCTTTACAAATATTACGTCACGAACATCACTTGCCTCGTATTT AAAAAATTACTATTGTGATTATGTCATTTGAGACATTAAAAATGACCTTT TTTATAAATAGAAAATAATTTTAATAAAATCTGCTGGGTGTTAATCACCA TGACAATAACTTCAAAACGTAGCTAGTGGTAATTTATGAAAAGGTCTATT TTGACGGAATTCAGCTTTTTTTCAGTTCTATAAGATATATGTGGTTCAGA GTCCAAAAACCTTTGCATCAAACGTTTGAAAAAGTCGTAAAATGAAATGG ACGCTACTTTGTAGAAAGCAGGGCGTCTAAGAACTAACTGATCAATAAAG AGAAATGTCGGTGTATTAATCAATGGGGAGTAACTTTGCGTGGTTGTGGC TGATTTATTTATTTTATTTTTGTAGCTCGGAACACACACTCGTGGCAAAA GGAAGAGAGACGAGCTCACCCGAATTTATAAAAATATGCGAGCAAAGAAA TAAACTTTCCTTTTCTGCAAACAAAGTCTTATTTTCCTTTATTTTAAAGT TGTCTCAAAAGTCATTTTAAAGGTTTTCTACGGGAATAAAAGGAGCTCAA GGTCGGGGTAAATTATACTAACATTCCATCCAACATGCCATTTTTATGGG GGGGGGGTACATTGAGTTTAAAGCCCGAAGGGCTATAGTAGAATCTCCAA CCTTTCTCAGGCAAGAAAAAATGAAGTCTTAAAAAATGCGCCGTATTTTT GACGACAGATTGAACCCAGCAATTCCTTTGTTTACAATTGTAGTCCGGCG GCGAAAAGGGCTTTTTTGCATCAACCCTTACAAGTAGTAAATATGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00029095TCONS_00029095Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00029095-proteinTCONS_00029095-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000724supercontigsc0000724:22402..30498 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
RPL3660S ribosomal protein L36 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
668.28 651.32 757.35 882.65 448.8 367.26 539.32 592.94 1015.04 869.71 991.63 1197.01 1223.9 1320.37 1133.3 1099.19 1233.37 1163.77 649.92 655.69 1206.6 1094.97 1013.6 906.25 758.25 794.24 1075.35 1016.98 731.43 750.58