XLOC_012371 (gene) - C. hemisphaerica

Overview
NameXLOC_012371
Unique NameXLOC_012371
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000403:200346..209877+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012371 ID=XLOC_012371|Name=XLOC_012371|organism=Clytia hemisphaerica|type=gene|length=9532bp|location=Sequence derived from alignment at sc0000403:200346..209877+ (Clytia hemisphaerica)
CTTTGGTAACTGGTGGCGGCAGTGGAATAGGTCGTTCAGCTGCAATTAAG TTTGCTGACAATGGCTTTCATGTTGTTGTTGCTGATGTAAATCTTAATGC TGCCAAAGAAACAGTATTACTTTTAAAGACTGAAGGATTGGCTCTGGAAG TTGATGTCAGTAATGAAGTAAGTGTGAAAAAGATGATGGATGCTATTATT CAAAAATTTGAGTTTCTTGATGTTGCATTTAACAATGCTGGTGTTGAAGG ACTAAGattgaaaattgatgaatacCCTACAGAGATGTTTCATAAAGTGA TTGATGTAAATTTAAAAGGTATCTGGCTTTGTATGAAATATGAACTAAAA CAAATGTTGAAACAAGATTTGATCATTGCTGACCCAAGCAAATGGAGAAA TAAAGCAGATTTCTCTAAATATAAAGGCAGTAGGGGCTCTATAATTAATA CAAGCAGTACTGCAGGTTTTACAGGCATGCCTGAATTTTCACCCTACTGT GCTTCAAAATGGGGTATCATTGGACTCACACAAACAGCTGCTAAGGAGTA TGCTGCTAATGGAATACGTGTCAATGCTGTCTGCCCTGCAACTACCGATA CTGCTATGAGGGATCGGTTTAAAAACCAATGGCCTGATTGGCAAACAGCA ACTGATGCTCGTTACCCGGTTGGTAGGATTTGTACGCCAGAAGAAGTAGC AGAAGCTGTTTACTGGTTAGCCAGCGATGCTTGTCCATTTGCTACTGGAG AATATCTAAAACTTTCTGGTGGAATGTAGATGAGTTAGATGTTTAGAGTA ATTAGAATGTTTTTACTATCAGAGATTACTGCgagccggtctccacttgc gcgcgctgcgatcacACTTTTTCGAACAAAGGtaccacgctattggtcaa aagaaaaatgaagcaattccattggcccgatctgacgtaacggttttttt cgagcgcgcactggatttttatgacgtaatcttttttccaagctaaaagg TCTGAAGCGAAAAGGTGCGATCACAGCGCGCACAGAGACCGGCCTTGAGT CNACAGCGCGCGCAGAGACCGGCCTTGAGTCATGTCATAAATCATTATAG ATCGTTCATTCCCTAATGATTTTCTTTTGGAATAATGCTAATCCTGAGAT TTagggtgttttttttataattaacTTTTATACTGAtttatttagtaaaa aaaaggttgaaaattagAAAGGTGACTATGTTGGGCATGAGACAACTGAG AGATGGACGGTTTATGCAGTAACAATGATTTTTATGATTACATCTACAAA GTAATTATTATTGGTGATGGAGGAGTTGGTAAGAGCACTCTAATGAAACA ATTCTGCAATACAGAATCAAATATTGATACATTGCAAACTACTGTTGGCG TAGATTTTCAGGTAATTCATTTTGAATTCATAGGGGTTAGACCtaacaag tttttttattttaattttttgatagTTTAGTATCTCACTTATGGTTTCAG AGTCTGATCTTAcgtttgtatttattttttctgtattagtcttgaaataa atataatataatgtcACTGCACTaatgtcatttttattttctgaaacGGT TCAATGTCCATGTGTATTACCCTTGCTTCATTGTTTGTTTTGTGTTTCTT TGTTTTAGTATTGTGCTTCAATTATAGAATTCTTATTGTTTCATTATTGT ATCAGTTTACtgcaaaataaatatttttggtttttcactGTCATTGCATT GTATCTTGATTCCTTTTGCCCACGTTTGTTATAAGATATGTTTATGATTG CCCATGTCTTAGAAGAGCCAGGTTCCAAGTAAAGAAAATTGGATtacata ctcttaggttccaaataaacggggggggggggNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAaaaagcggggg gggggggggggcgtttatttagaACCTAAGAGTATACAATTCTCAGTCTT AGTTACAAAAAGACTTTtgtaaaatgcaaaaaatcattatgTTGTAGGGT AAACTGTTTGGTCCATTTGCATATAAGAAATTACTAAAAGACTTGTAAAC TTATCAAACTGTACATGGCTtagttaaatatattttttctggtttaaatt ctgaaaattattAAGCATCTACATAGCTTTACAAAATATTGATCACTTGT CAAATTAAACCCCACTAATCGAATCTACTTAATGTAGTTCTGTAGCTata atttctttgatattttctaATGTCattatttaaaaatcttttacaaaagg TTGTTGATATAAAAGTCAGAGACAAAATCGTCAAATTGAACTTGTGGGAT ACTGCAGGTCAAGAACGGTAAGAACAAACTCATTCCAAAATTCCTTGAGT GTTATTCTCTCACATTGCACTGTTATGGTCAACCGAAGTGTAAGGATTAA CAAATGGTTGTTTTTGTGTCAGAATGCAGGCTAATTGAATTGCCCTTATA CATGTTTTACTTTTTACTAGCATAACTTTCGTAAGCATACTAACAGTGAG CTTTTCATTGGTCATTGGTCATTGGTCATGGGCTGCAAATTTGGGaagat taatttttcttttccattttggCGATTGatccttttttttcttcagaaat caCAAGCATGATTCCAAAATATAAGCTAAGCATAACTGAGGCTGTTTTCC AAAGAAAGTaagctaataaaaaaaacatgtagcttAGATATTATGTTAAT GTTTCAAATCTATATTGCAAGTATGGACAGTGCTTTCTTTCAGGAAATGA ACTTTTATTTCTATAGATACCAATCCATAATCAAGAAATACTATCGTGAC GCTGACGCTGTTATTTTAGTATTCGATTTAACCAACATTGAGTCATTCCA ACACATTTCCACGTGGTTGAGGCAAGTGCACGAGAATTGTGATAAAGATC CATACAAAATATTGGTTGGAAACAAAAGTGATcttgatttgaaaattgaa cTTGAAGAGATACAGGTAACGTAGTCAGCGATCAAAAGCTGTAGAAAAAG GATTTCGGTTGTGATCTACCAGTGTCAAATTACTTGTCTCGTCTTCCTGG AGTTATTTTTGCAATTACTGAAACATTTAGCCTATTGTAAAGTCGAAATC AGGTCTCTTGTGGCATTAGGGTTGAAATATAATTGATATTGAAAGGTTTT TTAATATAGGTGTATTCTTTGTAATTTAGGGTAATTTAAGTGCTGAAGTC TtcttatatttttgaattttcaaaggaaaaatttgCTCGATTTGGAATGT TccttttaaggcaattttatAGGTTTTGAAGAGAGACAATTTTCAAGCTT GAAACATGTAAAACCCTTGAAAATTCCGTGGTACTGCAGAGAAGAGTTTA CTGTGTATCGGTTACCTTATTAATCCCGCCCGGGcgtttattacattttt ttatttttaggagaGGCGTTATCTGAGaaggcgtttaaaagaaggggacA TTTATATTAAATAATTTAGAACCGAGGCCGCTTTATTAGTGTGAATTGAA ACCTTATTTGGCCTTTTCATTATAATTTGAGTACAAATAGATCAATAGTT TTCTTTTGTactatacagttgacgctctctaattcgatcttcaaggggaa ttggattttcatcgaatacgggtgcgtatcgaatagtatagcgtcgttta tgagagtttcttgttgacggggtttttaaatttcatcgaataaggtagcg agcacctcactaaaaaccgggatttttaatctcgtttcttagtgagttcc actttgacgattttcgaaaaatagaagcctttcaattGCTTTNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggag cccgaaaacccgggctcaaaacattcgaaaaagtcgcaaagtggaataga cgttaattgcgtaaaaaaacgcgggtgacgtctagtataggctacgaata agggagcctatcgaatagtagaacgtcgaattagagagcgtcaactgtac ttcCTTACAGCTAGAGCTacttgtttcaaaaaaaattgggacGCTCAAAA TGTCTCTCAAAGGAGCAGCATTTATTCGAGGGGCCGTTTATTCGAGGTAA TAAGCTTCCCTAATTTAAATCTGTTTAAATTCCTCATTTTTCTAGAATCT TGCACAATTGTACGATTTGAAAGTTTACACTACTTGTGCTAAGGACGGCG AGAACGTTTCGGATACCTTTTATAACTTAACTGAAGATCTGGTGCTACTT CAAGACCAATTGACTCCTTACATTTCCATTGATTCTGGTCCTCAAAGTTT GTTTCTTCACATGCAAGCTGATCGAAACAAAGCAGAAACATATTGCTGTC AATATATTTGAATTTGTAGTAAGTGCATAAAgtctttttgacgttttatt attttcaacagaACATTGGATATTTTATTTGGAATACGTATATAAACTTC TCTTAACTTCTCTTTTTAGTAACCAAGCTCCCTGTTGTCACCTTAGGTTT CTCTCTAGGGATCATGGCATGAGTTTCAAATACTCCTTAAAGACCTATTA GATCAAAAAAATTACctattagataaaaaaaattgacattttttgacaCT TTGTATAGGTTTaaatgtgcggacgggacctccgaaaaccgacccttaga gagaccaaattttagtgaaaaagtgacccttagagagactttttgcgata aaaattttctctgattttcaaaaatttcctacccgactttttttataatt ttttctctcaaaatcaaatttttttctaaaaatcgtgatttttcccaccc ttagagagactactttgaaatttcctgatttttgtaacccttagaNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc cccccccccccgggtttaaaGTTTGAACAATCGATACAGTATAAGTAATA TATCCTTATTTTTCTGAActtaattttagcgaatttaTGTATTGTGTAAA CACACAGGTGACGAGTTTTTGGTTTATCTTGGTTTAAGCTTCTAACCGTA CTCGATTTTGCCGCTCAAAACTACGAGTTGTTTTAGTCACTATTCTCAGT GAATCTGCTGTAATTCTCCTTTAAAGTTTTCATCATTTCCCATTTTAGGT AATTTGAAAACACGTTTGGTGCATCACTGACATACTTCACAAAAGAGAAA ATGTCAAACTTCAGTGGCGCTTTACAGATCACAGACTTGAACGACTTCAT AACTCCATCACAAGAGTGTATTAAACCAGttcaaattgacaaaaacaatg CACCGAAGACTGATAAAGGAAGAGCTGCCATTAAAATCGAAGCTGATGGT TATTACCAAGTATGGAGACTTTTCCTGACTTTTCATCAGTAATAATCTGT AACCAGCACGGTACTAACCTTTATCAAGGGGGTCTTTGTGACTTTAGTAT GTTAATTACATTTTGTTACACTGGATATACCTTATTATTTATTACTAGtc tttttattaacacgaattcaaaatattttctaaactaATCGAATTCTTCA AAACTATGATGGTTTTAAATTAACTTTTATAAATTCTTCCTTGAATTTAA AGTCTTATTGGTTGGTATGAAGTTTAAGCCATGAATCATTTTAATACAAC CAAAATAATACGCTTCTTGCTAATTATGCTAAAAATCTTTCGTGCTAGGA AATAACTAGCATGCTAGACAACTAATatagatataaacaaaaaaccaaaa caaacaaattggACAAATTGTATTTTTTAACACTAATGTTACATGGATGG tgaacgactccagtctagaaaATAACTttgttttaccattttttgaccAT ATCTTCTTTCTGTCAGATTGATGAAGACACAGGCTCACAAATTCGCTTGA AGAAAGCAGAGATCACTTTGAATGATTGTTTAGCTTGCAGTGGTTGTATC ACGTCAGCAGAAACAGTCCTCGTCAATCAACAAAGTAAAGATGAACTGTA TAGGTATCATATCATTGCATTCTTTTTCCAGCATGAAATTCTGTGTCGGC TTTGAAGGAAAGTTTCCATTCCTTTGTTGGACTTCTAAGTCATTAAAGTA TGCCGTCGGAGGAACGGTCAAATCTcataatttgattgaattttttgtat TGCTAACCTTAAATTCTGGACAAAAACCACCTTTGGGTCCTCCTTGTGTG AAAATAATTATGGAAATAATTCACAATTTAGTTGGAGAGGAAGATCGTAC TCAGTTTTGTTAGCCACTAAGTTTTAGATTGGACCTCTTTGCTTtcatta ggcgagaccaatttaatttgttgttctacggcgCGACCGACCCAGTATTC GGtgcaaacgaaaaaataatacTATTGAATTTCCTGTGCCACAAATTTCC AATAGTCATTGGAAAAATTTACACTTAAaaaagaagttgaaaaaagaATC TAGAATCATGAAATCTATGCACGAAAAATTTTATTACAAACTCCATCAAa gatgaatgatgaattttcgatcaagattatttgaaaatattacttaaagt ctttcttgattaatgaaaatttatttattatttatttttatttaaccgAC TGATCGACCGactcatattttgctaacgatctgcccgtagaacaacaaat ttaattggtctcgccttaaaaggacaaaaatgctgaataaaatttcagcg agttttagaaaaccttttttttacaaCACGATCCATCACCAATTCTCTAC TGTACCAATGTTATTACTTCTCAGGATCATGTCAGAGAACGAAGCAAAAC CTGAAAGCGAGAAGGTCCACTTTGTTGCATCAATCTCGCCACAATCATTA GCATCTATTGCTTCGAAGTTCGATTTTACTATGGATGAATGTATGGGAAA GTTGACGACCTTCTTCAAACAACTGGGTTTTGTGGAAGTGTTTCATACAA ATCTTGCAAGAAGTTTGTCCTTGATTGAAATGCAAGAAGAATTTATTAAA AGGTCTGTTTTTTCTTTCGTCCTCTTATGTTGGACGAAATGCGGGTCGTA CGGTCTTGATGGGCAAGTAGTTGCATAATTACCTTCTTTCTAGGAGCCTC GAGTCTACTCGTGGTTCCTATGGTACCCATTTATATTCTTTTTCTACCCT CTGATTAAAAATGttgttattacttttttcttaAGATATCAATCACCAGT CAAGACGTCATTTccaatgctgacgtcagcatgtCCAGGTTGGATTTGTT ACGCTGAGAAGACGCATGGCAATTTCATATTGCCTTACATCAGTAAAGTC AAATCTCCCCAAGCTGTCATGGGAACGCTGGTAAAGAGTAAAATGTCACA AAAATACGGAGTCACTCCAGAACGTATCTATCATATGACAGTAATGCCGT GTTTCGATAAAAAGCTAGAGGCGTCGCGTGAAGATTTTTATAACGACGTT TACCAATCTCGTGATGTTGATTTAGTGATAACGTCATTAGAAATTGAAGG GATGCTACAAGAgaagaaaatttatttgaaaaatgtcgGTCAAACGTCTC TTAGTTCTGATTTGAGTTTACTGGATGGTGATGGTAGCTTGGTCAGCCAT ATTGGAAGCAGCTCCGGTGGTTATTTAGAGCACGTGTTTCGGCACACGTC TCAGTCACTGTTCGGTAAAGAAAGTAGGGAACCACTGGAATATAAAATGT TGCGAAATAAAGATTTTCAGGAGGTTTCTTTGATGGTTGACGGAGAAGAA AAACTGAAATTTGCTTTCGCGTATGGTTTTCGCAATATTCAAAATATCGT ACAGAAAATCAAACGGAAGAAATGTCAGTATCATTTTGTAGAAATCATGG CGTGCCCATCAGGGTGTGTAAACGGTGGTGGTCAAATGAGGGCGGAAACT AAAGAAGAAGCTAAGTCATTGCTTGAAAGAACTGAAGAACTTTATCAAGA AATGGCTAAAGAAGACCCGCGTGATAGTGAAATGACAAGAGATATTCGTG AACATATACACGAATTCAAAATGGTGGACAATAAAGACTCTTTACTTTAT ACCGAATATCATGAAGTGAAAAAGAACGTGACGGCCTTGAATATTAAATG GTAGTTAGATCTTCTTGTAACCGAGATGATGCTATAAGATTCGAGATTGT TAGAAATGCAATTTGATAGGTTGgtgaaaaacataattttagaaCCCTCG TCCTAGGGTCCTTCGACTACCTTTTTCGTTTTACAATCTCACGTAAGTAG CTAAGCATACATAAGCACAATTATGTAAATAACTTTCAATTCTAAGGACT CAACTTTACTGATAACTGAGCTGGGACTCGATTGCTCAAAAGCATAATGA CATTGACAGATTTCATCGTTTAAAATTTAGACATANACTGAGCTGGGACT CGAATGCTCAAAAACATAATGACATTGACAGATTACATCGTTTAAAATTT AGACATACTACTACTGAAATGTTGTTGGCAAAAAGTCTTTGTATGTAAAG GAGTTAAAATATCTGTGTTCAGTTCACACCAGGCGTTCTCATAATATTCA TGGTATAAACGCCTTTATTGTTACCATGTTATATTCAAtatactcttttt tataagcataacgtttataaggatacttaggctcaaattcggtaaaaagc aagcataatgctaagcattGCTCATCATATTGAGCCTTGACCCGTCCCAA TCTTCccgtattcttataaaaaagtgtaaaaaaccttaCTGAACCTATAT ATTGGTTTTTGgaacatcatttttttcaaaaagtgaaaaagtctTTTTGT TTGTTATGTTAAAGTGTGAAATCGCTACAACTCACAACCACAGCGGTTCa ctgagaatttcaaaaatataaaattttttgaggtttttcaTTGTAATAAA GTCTTTTCGCTTTTCAAGatacatttttgtattttgcctTTAACCTGTGT CTCAGTAGAGCAAGTTTgatgtgaaattttttccaGACAAGTGAGAACCC TTGTTTTATCTAATGGTCTAATATATCACGTGAAATATATTCTTCTCGGa ggttattattatttttggaaCCTTTTAGTATAACATCTTGTAGatttaat tgtatttttttctgctgaaaatttgatatcatttttatatgagttttttt ttattatgacTGTCAATCTGTTGAAAAACGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022025TCONS_00022025Clytia hemisphaericatranscript
TCONS_00022026TCONS_00022026Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022025-proteinTCONS_00022025-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000403supercontigsc0000403:200346..209877 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
NARFLcytosolic Fe-S cluster assembly factor NARFL isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.71 19.3 11.14 9.62 26.72 19.61 21.05 21.67 16 15.46 14.27 15.57 14.33 15.45 14.59 15.01 15.79 17.99 15.82 15.48 17.08 16.73 21.09 21.94 16.05 17.38 10.4 9.05 14.59 14.27