XLOC_014670 (gene) - C. hemisphaerica

Overview
NameXLOC_014670
Unique NameXLOC_014670
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000562:111790..118808+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_014670 ID=XLOC_014670|Name=XLOC_014670|organism=Clytia hemisphaerica|type=gene|length=7019bp|location=Sequence derived from alignment at sc0000562:111790..118808+ (Clytia hemisphaerica)
CAACATTCAACTCACTCTGACAAGAACAACGTGCAAACAGCACACAGAGA AGAGAAAGCTCTATCGAGAAGACCCACTCAGCCAATAAAGGCATCGGTAG AAAGAAGCAGGCAAGCCAAAAGTCTTTACAATTCGACGGTGACAAGACGA TGCAAGCCTAGCTGACTACGAAAGGGTCTTCGAATACAATTTCCGTCAAA CATATTGCTACAATTATTGATTTACATTGAGATTTTATATACCTGAAACA TTTTATACAAAATAGTTATGGATTTAATGTGTAACGAAGGATCGGCTAGT TCGAGCGTACAACGAACATACTTGGACAAAAACTTGATAAAAGATGGTAG AGTTTTAGATAGACTGTTAAAAATTGAAGATCATTATATACCTAGATGTG ACTATtttaaaattgtacaaaaagaGATAAAACCTTTTATGAGGAAACTA GTTGTCACATGGATGTTTGAAGTAAGTATTTTTACAGATATATTTTTGAT CTGTTTGAATATTGTTACGATAAAAGTTTCTGGattctttcgaatgtttt gttttggattTTGGACGCAAATTTGGTTACCATTTTAAGCAATGCATGTG CGTGCCTGCGTGCGTCATTtcgattcgaacgttcgaaatgtTTCACCTTG GGGTTTTCCTGGATGAAATTccttaaaataataatattttggGTTTTTCA TTTCAGGTTTGCGAAGAATCGAAATGTGAAGATGATGTTTTCCCGTTGGC TGTGAACTTATTAGATAGATTTTTATCCATTGTTAGCATACGAAAAACAC AACTACAACTACTTGGGACTTCATGTATGTTTATAGCATCAAAATTGAAA GAGACAATACCATTGACTGCAGAAAAATTAGTTATATATACAGAcaattc gataaaattggaagaATTATTGGTGAGTATTtatatatttaatttttttg aacNGTTGCAAAATATACTTGCAGCACTtttctggtctttaaaatacagT TATAATCACATTGTTTATGTAAATCCGGgtgtcttttttgagaaaaaaaa ttaatattttatgattttctttaccaaaataaaaaagtctctcaTATATC CTAGCTTTTTATCTAAAAGGTCTTTGTATTTGTTTTATACATCAAACATT ATAAAATAATAAGCGATTCgattaaaaaattgttatatttaAAAAGCGTA TTACCCCCGGTTTTCAACAAAAGAGCGATTTCATACATAAAGAGCTTTTT GACATCTCTCTGATTAACAACATTCAACTCACTCTGACAAGAACAACGTG CAAACAGCACACAGAGAAGAGAAAGCTCTATCGAGAAGACCCACTCAGCC AATAAAGGCATCGGTAGAAAGAAGCAGGCAAGCCAAAAGTCTTTACAATT CGACGGTGACAAGACGATGCAAGCCTAGCTGACTACGAAAGGGTCTTCGA ATACAATTTCCGTCAAACATATTGCTACAATTATTGATTTACATTGAGAT TTTATATACCTGAAACATTTTATACAAAATAGTTATGGATTTAATGTGTA ACGAAGGATCGGCTAGTTCGAGCGTACAACGAACATACTTGGACAAAAAC TTGATAAAAGATGGTAGAGTTTTAGATAGACTGTTAAAAATTGAAGATCA TTATATACCTAGATGTGACTATtttaaaattgtacaaaaagaGATAAAAC CTTTTATGAGGAAACTAGTTGTCACATGGATGTTTGAAGTAAGTATTTTT ACAGATATATTTTTGATCTGTTTGAATATTGTTACGATAAAAGTTTCTGG attctttcgaatgttttgttttggattTTGGACGCAAATTTGGTTACCAT TTTAAGCAATGCATGTGCGTGCCTGCGTGCGTCATTtcgattcgaacgtt cgaaatgtTTCACCTTGGGGTTTTCCTGGATGAAATTccttaaaataata atattttggGTTTTTCATATCAGGTTTGCGAAGAATCGAAATGTGAAGAT GATGTTTTCCCGTTGGCTGTGAACTTATTAGATAGATTTTTATCCATTGT TAGCATACGAAAAACACAACTACAACTACTTGGGACTTCATGTATGTTTA TAGCATCAAAATTGAAAGAGACAATACCATTGACTGCAGAAAAATTAGTT ATATATACAGAcaattcgataaaattggaagaATTATTGGTGAGTATTta tatatttaatttttttgaacattaaaaaaagCATCAACCAATTTTGAAGA CATTTCTTGAAATATCATGGCAGGCATAGACCCCCCTGTTTATTGTACGT TGTTGAGGTCTATTTTATCTTTCGAGGTCTAGCANTGCTACAATTATTGA TTTACATTGAGATTTTATATACCTGAAACATTTTATACAAAATAGTTATG GATTTAATGTGTAACGAAGGATCGGCTAGTTCGAGCGTACAACGAACATA CTTGGACAAAAACTTGATAAAAGATGGTAGAGTTTTAGATAGACTGTTAA AAATTGAAGATCATTATATACCTAGATGTGACTATtttaaaattgtacaa aaagaGATAAAACCTTTTATGAGGAAACTAGTTGTCACATGGATGTTTGA AGTAAGTATTTTTACAGATATATTTTTGATCTGTTTGAATATTGTTACGA TAAAAGTTTCTGGattctttcgaatgttttgttttggattTTGGACGCAA ATTTGGTTACCATTTTAAGCAATGCATGTGCGTGCCTGCGTGCGTCATTt cgattcgaacgttcgaaatgtTTCACCTTGGGGTTTTCCTGGATGAAATT ccttaaaataataatattttggGTTTTTCATATCAGGTTTGCGAAGAATC GAAATGTGAAGATGATGTTTTCCCGTTGGCTGTGAACTTATTAGATAGAT TTTTATCCATTGTTAGCATACGAAAAACACAACTACAACTACTTGGGACT TCATGTATGTTTATAGCATCAAAATTGAAAGAGACAATACCATTGACTGC AGAAAAATTAGTTATATATACAGAcaattcgataaaattggaagaATTAT TGGTGAGTATTtatatatttaatttttttgaacattaaaaaaagCATCAA CCAATTTTGAAGACATTTCTTGAAATATCATGGCAGGCATAGACCCCCCT GTTTATTGTACGTTGTTGAGGTCTATTTTATCTTTCGAGGTCTAGcagaa aagttaaaaaactaaaaagttcTCCTAATGAGTGTGTGAAAATTCCGAAA TCATTATATGCTTCTTTCTGAAGCCATTTCAAGGATTGTTAAATAAATGA ATGAGTACTCAATCAACTAAATATCGCTTTTTTATTGCCTTCTTTGCAAA TGTTTCTTTATGCCAACAATAAAATGGTCGGCCCTGTTTTGCCTTATTTT GGATAAAGCTCTAGAGAACTTTTCCTGCACGTGTTTTTACTTTTCTGAAT GTAAATTCGAGAAAGAGATTTTAGCTTTTTCGGTGCCTTTTAAATTATGA CGTAGTAGTTCCCATAGAAACTTTTGTTTCAGCCTAAAGTAACAAAAGCC AAtgttgtgttttgttttgtcgcATTTATGTTCGAAACGTTTGgttcttt ttgttattttcctttgtttactttttgattttttaactgTTTGATTACAC GGGaaaaaagctttttctgcttAGCCATCAGTCACTGAAACTTTGGTGTT GTATTGCATATTTGACTGAAACTGGCGCCTCTAATACCTTTGGCCTTTAT TCAATTAATCTATCTCGAAAAAAGCTAAACGATCACTTCAGTCCGGAAAG TCGTTATAAGTTGATCATCAACATAACTTTTGCTCTGCGTTTTTCGTCAA TCCATTTTGTTGTGGTATTTTAAGAAAGTGTTCAGAAGCAATGACACTCT AAAATTTGTCTCTACCATACTTGAAAACAAGTTTGTTATTCTACAGGAAA CTAAACGTCAAGAAAACATGATTTCATGTAAACAAATTATGACGGACTTT TCTGAATAATTTCTCatctttgtatttttcaggacTGGGAAATCTTAATC TTGAACAAACTGAGATGGGATATCGCGGCTATAGTTCCAAACGATTTTCT AGAATTCCTCTTCTCTCGTATCACTGTACCAGAATGTCTTGAAAAAGATT ACATCCTAAAACACTGTCACACTTATATCGCTCTCTGTTGTATAGGTATG TTtacttttttcctctttttagtCTTGTGGCCATATATCTATAATGAgtt tttaattgatttaaatttataatttatcaagatttgaggaaaattttaat gatttctttttcctttttcgtCATTTTATGTGAAATTTTAACTGCGTGAC AAATTTATGAATGCTGACACGaaacaacaaacaaaatatATTGTGCTTGC ATCTCACTTTCATGGTagatttaaatttcattaattgaATTCGCATTTTT ACTCTACCTTCAGATTTCCTTTTCACCAACTTAAATTCTCCATCAATGAT TGCAGCTGCAGCAATTTGCGCTACATTTCAGAATTTACGATACCAATTTG GTTCATTCTGTCCTTCAAACTATGAACTTATCCAAAGGTTGACCGAAATC ACCGGCGTTGATGAGGTACGTATTGCACGTAGAAACATATTACTGTGACC TGTACTGGAATTCGTTAAAATTTTGCAGATACAGGTGATTCGATCGGTTC AAATGATTttaatcaaattattttcactcttaatctgtctcaattttcaa tattgctGAAAAATAAATTACTGTTTTAATTGTGTCCAGTCGTTTTTTCT AAACCTCAATCCTACGCGCCATTTTGACGTCACTAGATTGTGGCTGAACT GGAAAGGATGTCTATAATTTAACCTGGTTTCTAATGAAGGAAAGTTTATA AGAAAacgaaaattctcaaatttcctTCAAGATTTTGCCTATTTCAACAT AAAATTCCAACATCTGAAATTTCCCTTTAGAgtatttcttataaataaaa tttttaatgacCTTCCTTTCTCTCtaatttttcaggattgtttgGTTGAA TGTCGACAACGAATGGATCAAGTTATAAGAACACATATGAACAATGATAA TAATAGTANCTGTTGTATAGGTATGTTtacttttttcctctttttagtCT TGTGGCCATATATCTATAATGAgtttttaattgatttaaatttataattt atcaagatttgaggaaaattttaatgatttctttttcctttttcgtCATT TTATGTGAAATTTTAACTGCGTGACAAATTTATGAATGCTGACACGaaac aacaaacaaaatatATTGTGCTTGCATCTCACTTTCATGGTagatttaaa tttcattaattgaATTCGCATTTTTACTCTACCTTCAGATTTCCTTTTCA CCAACTTAAATTCTCCATCAATGATTGCAGCTGCAGCAATTTGCGCTACA TTTCAGAATTTACGATACCAATTTGGTTCATTCTGTCCTTCAAACTATGA ACTTATCCAAAGGTTGACCGAAATCACCGGCGTTGATGAGGTACGTATTG CACGTAGAAACATATTACTGTCTGACCTGTACTGGAATTCGTTAAAATTT TGCAGATACAGGTGATTCGATCGGTTCAAATGATTttaatcaaattattt tcactcttaatctgtctcaattttcaatattgctGAAAAATAAATTACTG TTTTAATTGTGTCCAGTCGTTTTTTCTAAACCTCAATCCTACGCGCCATT TTGACGTCACTAGATTGTGGCTGAACTGGAAAGGATGTCTATAATTTAAC CTGGTTTCTAATGAAGGAAAGTTTATAAGAAAacgaaaattctcaaattt cctTCAAGATTTTGCCTATTTCAACATAAAACTCCAACATCTGAAATTTC CCTTTAGAgtatttcttataaataaaatttttaatgacCTTCTTTTCTCT CtaatttttcaggattgtttgGTTGAATGTCGACAACGAATGGATCAAGT TATAAGAACACATATGAACAATGATAATAATAGTAATGCGGACACTTCCA AACTAGAACAACAAAAACATTTGGAGAATACTCCACAGCAACCTGTCACA CCAACAGACATACAAGATGTCGCTTTCTAACATCTTCTCTCTAACTCTCT CAAAAAATAAAtacctttccaaaaaaatattaaaaatcgaaaatcaaatt attatgaACAACCGAGAAATTGTTCAAGGGACACCAATAAAAATCTACCG TTCAACACCACCTTCCATCGCCGTTTTTGCAATTGTACCGTTTTTCTGCT TCAAATTTTTCGTAACAGATTCGATCCAGAAAGTTCCTAGATGGATAGAA AATGACTGGAAATGCTTTCTTACTATAAAACATCCTTTCTTATattagtt ttatttatttttacacaaaaacTGTTCAAGTTATTGTACAAACTTCTATA TTTATTAACAAAAATACCTtgtcaccaaaacgaggctaattATTTCGATA ccatttactttttattttaattttttgactgCAAAGTTCCTAAaagatta tatttttgtttgtatgtttgtttgtttgtatcAGTGTGTCAGTGTGTATT GTATTGTTCTTCTAACTTTGTAAGTGTTGTCTTTTGTTcttcaatgttat ttttattgtttttctttttgaagtgAGGGTAAATTTATATGCGTCTGGAA CTTTAAACCCCAAAAAACttgtgaatatttttaaattttaaattaacGAC AAAATTCCAACGCATTTTTTTTACTATTGTAACTTTTTTATATCGATACG AGAAGGATTTTATTACTATTAAATTGACTGTTCTGTATCCCCTTCAGAAA TTTATTATGGAAATTTTAGGTAGGAAAACGAAATCTTTTTCAAAGTACAA TTGTTCATATTTTATGATAGATTTTTATTAGTTATACTTTTTATTACTGT TCCCTACACaagtttttaaaacaaaaacacaagataaaagcataaaatgg cgAAACTCATgaaaaaact
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00026069TCONS_00026069Clytia hemisphaericatranscript
TCONS_00026070TCONS_00026070Clytia hemisphaericatranscript
TCONS_00026071TCONS_00026071Clytia hemisphaericatranscript
TCONS_00026072TCONS_00026072Clytia hemisphaericatranscript
TCONS_00026073TCONS_00026073Clytia hemisphaericatranscript
TCONS_00026074TCONS_00026074Clytia hemisphaericatranscript
TCONS_00026075TCONS_00026075Clytia hemisphaericatranscript
TCONS_00026076TCONS_00026076Clytia hemisphaericatranscript
TCONS_00026077TCONS_00026077Clytia hemisphaericatranscript
TCONS_00026078TCONS_00026078Clytia hemisphaericatranscript
TCONS_00026079TCONS_00026079Clytia hemisphaericatranscript
TCONS_00026080TCONS_00026080Clytia hemisphaericatranscript
TCONS_00026081TCONS_00026081Clytia hemisphaericatranscript
TCONS_00026082TCONS_00026082Clytia hemisphaericatranscript
TCONS_00026083TCONS_00026083Clytia hemisphaericatranscript
TCONS_00026084TCONS_00026084Clytia hemisphaericatranscript
TCONS_00026085TCONS_00026085Clytia hemisphaericatranscript
TCONS_00026086TCONS_00026086Clytia hemisphaericatranscript
TCONS_00026087TCONS_00026087Clytia hemisphaericatranscript
TCONS_00026088TCONS_00026088Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00026083-proteinTCONS_00026083-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000562supercontigsc0000562:111790..118808 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CCND3G1/S-specific cyclin-D3 isoform 2 Homo Sapiens
CCND1PREDICTED: G1/S-specific cyclin-D1 isoform X1 Homo Sapiens
CCND2G1/S-specific cyclin-D2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
32.15 31.1 9.07 7.4 240.18 170.51 142.62 144.62 81.32 76.23 142.43 110.53 104.65 118.2 110.25 108.66 102.15 144.43 98.61 62.12 79.82 74.87 156.44 160.58 75.97 94.46 136.08 112.44 95.71 102.62